Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21642 Utricularia gibba HOM05D005994 ORTHO05D007322 5.9e-52 207.2 102 100.0
MSTRG.14470 Avicennia marina HOM05D005994 ORTHO05D007322 2.7e-49 198.4 100 96.0
HanXRQChr08g0213481 Helianthus annuus HOM05D005994 ORTHO05D007322 1.8e-48 195.7 100 93.0
MSTRG.13010 Avicennia marina HOM05D005994 ORTHO05D007322 2.3e-48 195.3 100 93.0
Migut.M01676 Erythranthe guttata HOM05D005994 ORTHO05D007322 3.0e-48 194.9 100 94.0
Oeu005493.1 Olea europaea HOM05D005994 ORTHO05D007322 3.9e-48 194.5 100 94.0
Oeu005968.1 Olea europaea HOM05D005994 ORTHO05D007322 5.2e-48 194.1 100 93.0
SGA_v2.0_scaffold168G38531 Striga asiatica HOM05D005994 ORTHO05D007322 5.2e-48 194.1 100 94.0
Rhsim06G0226700 Rhododendron simsii HOM05D005994 ORTHO05D007322 6.7e-48 193.7 100 94.0
CSS0045306 Camellia sinensis var. sinensis HOM05D005994 ORTHO05D007322 8.8e-48 193.4 100 93.0
ECA246G1213 Erigeron canadensis HOM05D005994 ORTHO05D007322 8.8e-48 193.4 100 92.0
Gorai.010G249300 Gossypium raimondii HOM05D005994 ORTHO05D007322 1.1e-47 193.0 101 90.1
Gohir.D06G216900 Gossypium hirsutum HOM05D005994 ORTHO05D007322 1.5e-47 192.6 101 90.1
Nitab4.5_0000163g0320 Nicotiana tabacum HOM05D005994 ORTHO05D007322 1.5e-47 192.6 102 90.2
Peaxi162Scf00955g00216 Petunia axillaris HOM05D005994 ORTHO05D007322 1.5e-47 192.6 100 91.0
vmacro11561 Vaccinium macrocarpon HOM05D005994 ORTHO05D007322 1.5e-47 192.6 100 93.0
Cc05_g14690 Coffea canephora HOM05D005994 ORTHO05D007322 2.0e-47 192.2 100 93.0
Gohir.A06G204600 Gossypium hirsutum HOM05D005994 ORTHO05D007322 2.0e-47 192.2 101 90.1
Actinidia05033 Actinidia chinensis HOM05D005994 ORTHO05D007322 3.3e-47 191.4 100 91.0
Nitab4.5_0001750g0060 Nicotiana tabacum HOM05D005994 ORTHO05D007322 3.3e-47 191.4 100 91.0
Aqoxy4G02214 Aquilegia oxysepala HOM05D005994 ORTHO05D007322 5.7e-47 190.7 101 90.1
MELO3C025540.2 Cucumis melo HOM05D005994 ORTHO05D007322 5.7e-47 190.7 100 92.0
Sed0000308 Sechium edule HOM05D005994 ORTHO05D007322 5.7e-47 190.7 100 91.0
arahy.Tifrunner.gnm1.ann1.CR688Y Arachis hypogaea HOM05D005994 ORTHO05D007322 7.4e-47 190.3 102 89.2
arahy.Tifrunner.gnm1.ann1.R43TP7 Arachis hypogaea HOM05D005994 ORTHO05D007322 7.4e-47 190.3 102 89.2
Nitab4.5_0000461g0100 Nicotiana tabacum HOM05D005994 ORTHO05D007322 9.7e-47 189.9 101 90.1
Sopen07g033490 Solanum pennellii HOM05D005994 ORTHO05D007322 9.7e-47 189.9 101 91.1
vmacro09668 Vaccinium macrocarpon HOM05D005994 ORTHO05D007322 9.7e-47 189.9 100 90.0
Actinidia00094 Actinidia chinensis HOM05D005994 ORTHO05D007322 1.3e-46 189.5 100 91.0
ClCG01G010630 Citrullus lanatus HOM05D005994 ORTHO05D007322 1.7e-46 189.1 100 91.0
COL.COLO4_07784 Corchorus olitorius HOM05D005994 ORTHO05D007322 1.7e-46 189.1 101 88.1
Glyma.09G011900 Glycine max HOM05D005994 ORTHO05D007322 1.7e-46 189.1 102 90.2
Glyma.15G116500 Glycine max HOM05D005994 ORTHO05D007322 1.7e-46 189.1 102 90.2
Thecc.06G236600 Theobroma cacao HOM05D005994 ORTHO05D007322 1.7e-46 189.1 101 88.1
Duzib235G0800 Durio zibethinus HOM05D005994 ORTHO05D007322 2.2e-46 188.7 101 88.1
Manes.09G081660 Manihot esculenta HOM05D005994 ORTHO05D007322 2.8e-46 188.3 100 91.0
Duzib192G0253 Durio zibethinus HOM05D005994 ORTHO05D007322 6.3e-46 187.2 101 88.1
CAN.G337.28 Capsicum annuum HOM05D005994 ORTHO05D007322 8.2e-46 186.8 101 89.1
Lj6g0002817 Lotus japonicus HOM05D005994 ORTHO05D007322 8.2e-46 186.8 102 89.2
Sed0000190 Sechium edule HOM05D005994 ORTHO05D007322 8.2e-46 186.8 100 89.0
PGSC0003DMG400022186 Solanum tuberosum HOM05D005994 ORTHO05D007322 1.1e-45 186.4 101 89.1
Lalb_Chr03g0035721 Lupinus albus HOM05D005994 ORTHO05D007322 1.4e-45 186.0 100 90.0
Phvul.006G141600 Phaseolus vulgaris HOM05D005994 ORTHO05D007322 1.8e-45 185.7 102 88.2
TPR.G10599 Trifolium pratense HOM05D005994 ORTHO05D007322 1.8e-45 185.7 102 86.3
ATR0564G257 Amborella trichopoda HOM05D005994 ORTHO05D007322 2.4e-45 185.3 100 89.0
Hund23128 Selenicereus undatus HOM05D005994 ORTHO05D007322 2.4e-45 185.3 101 88.1
Ah.06g181210 Amaranthus hybridus HOM05D005994 ORTHO05D007322 3.1e-45 184.9 101 88.1
DCAR_013214 Daucus carota HOM05D005994 ORTHO05D007322 3.1e-45 184.9 100 86.0
Potri.006G016300 Populus trichocarpa HOM05D005994 ORTHO05D007322 3.1e-45 184.9 101 87.1
PGR004G2260 Punica granatum HOM05D005994 ORTHO05D007322 3.1e-45 184.9 100 88.0
Sc03g0008000 Simmondsia chinensis HOM05D005994 ORTHO05D007322 4.1e-45 184.5 100 89.0
VMungo0540G2179 Vigna mungo HOM05D005994 ORTHO05D007322 4.1e-45 184.5 101 87.1
Haze_06972 Corylus avellana HOM05D005994 ORTHO05D007322 5.3e-45 184.1 100 87.0
Lsat_1_v5_gn_5_8041 Lactuca sativa HOM05D000063 ORTHO05D000906 5.3e-45 184.1 97 89.7
CANSAT56G3985 Cannabis sativa HOM05D005994 ORTHO05D007322 7.0e-45 183.7 100 88.0
Thhalv10026636m.g Eutrema salsugineum HOM05D005994 ORTHO05D007322 7.0e-45 183.7 101 86.1
Prupe.4G007400 Prunus persica HOM05D005994 ORTHO05D007322 7.0e-45 183.7 100 88.0
Solyc07g065275.1 Solanum lycopersicum HOM05D005994 ORTHO05D007322 7.0e-45 183.7 100 87.0
CDE12G0176 Ceratophyllum demersum HOM05D005994 ORTHO05D007322 9.1e-45 183.3 100 88.0
QL05p068624 Quercus lobata HOM05D005994 ORTHO05D007322 9.1e-45 183.3 100 86.0
QL05p068978 Quercus lobata HOM05D005994 ORTHO05D007322 9.1e-45 183.3 100 86.0
AL7G38530 Arabidopsis lyrata HOM05D005994 ORTHO05D007322 1.6e-44 182.6 101 85.1
BcaNung00192 Brassica carinata HOM05D005994 ORTHO05D007322 1.6e-44 182.6 101 85.1
A01p21090 Brassica napus HOM05D005994 ORTHO05D007322 1.6e-44 182.6 101 85.1
C01p26360 Brassica napus HOM05D005994 ORTHO05D007322 1.6e-44 182.6 101 85.1
Carub.0007s2505 Capsella rubella HOM05D005994 ORTHO05D007322 1.6e-44 182.6 101 85.1
Lalb_Chr19g0129971 Lupinus albus HOM05D005994 ORTHO05D007322 1.6e-44 182.6 100 87.0
Sabra06G0011700 Salix brachista HOM05D005994 ORTHO05D007322 1.6e-44 182.6 101 86.1
FAN25G0933 Fragaria x ananassa HOM05D005994 ORTHO05D007322 2.0e-44 182.2 100 86.0
Medtr2g026500 Medicago truncatula HOM05D005994 ORTHO05D007322 2.0e-44 182.2 102 84.3
RcHm_v2.0_Chr5g0000881 Rosa chinensis HOM05D005994 ORTHO05D007322 2.0e-44 182.2 100 86.0
AUR62017059 Chenopodium quinoa HOM05D005994 ORTHO05D007322 2.6e-44 181.8 101 86.1
MD00G1058600 Malus domestica HOM05D005994 ORTHO05D007322 2.6e-44 181.8 100 87.0
Aa31LG2G12530 Aethionema arabicum HOM05D005994 ORTHO05D007322 4.5e-44 181.0 101 84.2
EL10Ac4g07614 Beta vulgaris HOM05D005994 ORTHO05D007322 5.9e-44 180.6 101 85.1
BcaC09g50351 Brassica carinata HOM05D005994 ORTHO05D007322 5.9e-44 180.6 101 84.2
BolC1t02582H Brassica oleracea HOM05D005994 ORTHO05D007322 5.9e-44 180.6 101 84.2
Sp7g15010 Schrenkiella parvula HOM05D005994 ORTHO05D007322 5.9e-44 180.6 101 84.2
CARHR222840 Cardamine hirsuta HOM05D005994 ORTHO05D007322 7.7e-44 180.3 101 83.2
FAN21G1761 Fragaria x ananassa HOM05D005994 ORTHO05D007322 7.7e-44 180.3 100 85.0
Os08g0431500 Oryza sativa ssp. japonica HOM05D005994 ORTHO05D007322 7.7e-44 180.3 101 85.1
TWI63G1647 Tripterygium wilfordii HOM05D005994 ORTHO05D007322 7.7e-44 180.3 101 84.2
CsaV3_1G017030 Cucumis sativus L. HOM05D005994 ORTHO05D007322 1.0e-43 179.9 94 91.5
CsaV3_UNG053450 Cucumis sativus L. HOM05D005994 ORTHO05D007322 1.0e-43 179.9 94 91.5
MD10G1336200 Malus domestica HOM05D005994 ORTHO05D007322 1.0e-43 179.9 100 86.0
PSO063G2191 Papaver somniferum HOM05D005994 ORTHO05D007322 1.0e-43 179.9 100 86.0
AT4G16450 Arabidopsis thaliana HOM05D005994 ORTHO05D007322 1.3e-43 179.5 101 84.2
Cfa000074 Carpinus fangiana HOM05D005994 ORTHO05D007322 1.7e-43 179.1 100 85.0
CiPaw.10G079600 Carya illinoinensis HOM05D005994 ORTHO05D007322 1.7e-43 179.1 95 90.5
AUR62040659 Chenopodium quinoa HOM05D005994 ORTHO05D007322 2.9e-43 178.3 101 85.1
Ca_00743_v3 Cicer arietinum L. HOM05D005994 ORTHO05D007322 2.9e-43 178.3 102 83.3
BcaC06g33480 Brassica carinata HOM05D005994 ORTHO05D007322 3.8e-43 177.9 101 83.2
A03p49850 Brassica napus HOM05D005994 ORTHO05D007322 5.0e-43 177.6 101 84.2
C07p47910 Brassica napus HOM05D005994 ORTHO05D007322 5.0e-43 177.6 101 84.2
BolC7t45314H Brassica oleracea HOM05D005994 ORTHO05D007322 5.0e-43 177.6 101 84.2
BraA03t14080Z Brassica rapa HOM05D005994 ORTHO05D007322 5.0e-43 177.6 101 84.2
THA.LOC104810390 Tarenaya hassleriana HOM05D005994 ORTHO05D007322 5.0e-43 177.6 100 85.0
GSVIVG01037779001 Vitis vinifera HOM05D005994 ORTHO05D007322 5.0e-43 177.6 100 85.0
CDE01G0018 Ceratophyllum demersum HOM05D005994 ORTHO05D007322 8.5e-43 176.8 100 86.0
PSO832G1566 Papaver somniferum HOM05D005994 ORTHO05D007322 8.5e-43 176.8 100 85.0
Potri.016G009600 Populus trichocarpa HOM05D005994 ORTHO05D007322 8.5e-43 176.8 101 84.2
Zm00001eb179550 Zea mays HOM05D005994 ORTHO05D007322 8.5e-43 176.8 101 83.2
Eucgr.D00619 Eucalyptus grandis HOM05D005994 ORTHO05D007322 1.1e-42 176.4 99 83.8
THA.LOC104815483 Tarenaya hassleriana HOM05D005994 ORTHO05D007322 1.5e-42 176.0 102 83.3
Psat1g178480 Pisum sativum HOM05D005994 ORTHO05D007322 3.2e-42 174.9 95 87.4
Ah.04g166430 Amaranthus hybridus HOM05D000063 ORTHO05D000906 7.2e-42 173.7 94 87.2
Ciclev10016738m.g Citrus clementina HOM05D005994 ORTHO05D007322 9.4e-42 173.3 125 70.4
FvH4_3g00660 Fragaria vesca HOM05D005994 ORTHO05D007322 1.2e-41 172.9 94 86.2
Sabra16G0013400 Salix brachista HOM05D005994 ORTHO05D007322 2.7e-41 171.8 95 86.3
MBI04_g07210_MAGBIO Magnolia biondii HOM05D005994 ORTHO05D007322 3.6e-41 171.4 97 85.6
HPP92_013264 Vanilla planifolia HOM05D005994 ORTHO05D007322 4.7e-41 171.0 99 81.8
Peaxi162Scf00285g00824 Petunia axillaris HOM05D005994 ORTHO05D007322 9.7e-39 163.3 97 83.5
MBI04_g36325_MAGBIO Magnolia biondii HOM05D005994 ORTHO05D007322 4.0e-32 141.4 100 74.0
Atru.chr1.2350 Acer truncatum HOM05D005994 ORTHO05D007322 1.2e-31 139.8 101 70.3
SEGI_25373 Sequoiadendron giganteum HOM05D005994 ORTHO05D007322 3.5e-28 128.3 78 78.2
Mapoly0008s0024 Marchantia polymorpha HOM05D005994 ORTHO05D007322 9.5e-26 120.2 91 64.8
SEGI_29999 Sequoiadendron giganteum HOM05D005994 ORTHO05D007322 1.4e-24 116.3 91 61.5
Pp3c6_28950 Physcomitrium patens HOM05D005994 ORTHO05D007322 1.8e-24 115.9 91 59.3
AagrBONN_evm.TU.Sc2ySwM_368.698 Anthoceros agrestis HOM05D005994 ORTHO05D007322 2.8e-22 108.6 90 55.6
AagrBONN_evm.TU.Sc2ySwM_117.3129 Anthoceros agrestis HOM05D005994 ORTHO05D007322 2.4e-21 105.5 92 56.5
CBR_g41406 Chara braunii HOM05D005994 ORTHO05D007322 2.4e-21 105.5 90 56.7
Nn5g27130 Nelumbo nucifera HOM05D005994 ORTHO05D007322 1.3e-19 99.8 52 90.4
Cpa.g.sc3096.1 Carica papaya HOM05D005994 ORTHO05D007322 2.9e-19 98.6 50 88.0
TAR626G0394 Trochodendron aralioides HOM05D005994 ORTHO05D007322 2.9e-19 98.6 51 90.2
Medtr2g097750 Medicago truncatula HOM05D005994 ORTHO05D007322 6.6e-19 97.4 59 78.0
MCO11G626 Micromonas commoda HOM05D005994 ORTHO05D007322 1.5e-18 96.3 87 56.3
Dinv10313 Davidia involucrata HOM05D005994 ORTHO05D007322 3.6e-17 91.7 94 58.5
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 4.0e-16 88.2 51 80.4
HanXRQChr17g0564261 Helianthus annuus HOM05D005994 ORTHO05D007322 8.9e-16 87.0 48 83.3
SMO223G0003 Selaginella moellendorffii HOM05D005994 ORTHO05D007322 2.6e-15 85.5 87 49.4
Nitab4.5_0005540g0030 Nicotiana tabacum HOM05D005994 ORTHO05D007322 3.4e-15 85.1 52 80.8
Zm00001eb041720 Zea mays HOM05D005994 ORTHO05D007322 9.2e-13 77.0 55 63.6
TAR627G0003 Trochodendron aralioides HOM05D005994 ORTHO05D007322 8.6e-11 70.5 43 79.1


User provided reference genes

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