Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21571 Utricularia gibba HOM05D000300 ORTHO05D008505 1.5e-107 393.7 335 100.0
SGA_v2.0_scaffold34G13828 Striga asiatica HOM05D000300 ORTHO05D008505 3.2e-62 243.0 220 64.1
MSTRG.6839 Avicennia marina HOM05D000300 ORTHO05D008505 5.4e-62 242.3 160 81.2
MELO3C016520.2 Cucumis melo HOM05D000300 ORTHO05D008505 5.4e-62 242.3 203 66.5
ClCG10G006870 Citrullus lanatus HOM05D000300 ORTHO05D008505 7.1e-62 241.9 203 66.5
Duzib213G0972 Durio zibethinus HOM05D000300 ORTHO05D008505 9.2e-62 241.5 160 80.6
Peaxi162Scf00000g00412 Petunia axillaris HOM05D000300 ORTHO05D008505 1.6e-61 240.7 160 80.6
Ciclev10007647m.g Citrus clementina HOM05D000300 ORTHO05D000383 3.5e-61 239.6 160 80.0
Cc05_g12170 Coffea canephora HOM05D000300 ORTHO05D000383 3.5e-61 239.6 160 80.0
Haze_09412 Corylus avellana HOM05D000300 ORTHO05D008505 6.0e-61 238.8 154 81.2
Manes.03G111900 Manihot esculenta HOM05D000300 ORTHO05D008505 6.0e-61 238.8 160 80.0
CsaV3_3G006220 Cucumis sativus L. HOM05D000300 ORTHO05D008505 7.8e-61 238.4 201 65.2
Hma1.2p1_1618F.1_g293900 Hydrangea macrophylla HOM05D000300 ORTHO05D008505 7.8e-61 238.4 150 82.7
Dinv04313 Davidia involucrata HOM05D000300 ORTHO05D008505 1.0e-60 238.0 203 67.5
Potri.011G121000 Populus trichocarpa HOM05D000300 ORTHO05D008505 2.3e-60 236.9 203 66.5
QL08p020830 Quercus lobata HOM05D000300 ORTHO05D008505 2.3e-60 236.9 149 83.9
GSVIVG01014363001 Vitis vinifera HOM05D000300 ORTHO05D000383 2.3e-60 236.9 203 66.0
Gohir.A04G028900 Gossypium hirsutum HOM05D000300 ORTHO05D008505 3.9e-60 236.1 203 65.5
Gohir.D05G358300 Gossypium hirsutum HOM05D000300 ORTHO05D008505 3.9e-60 236.1 203 65.5
Oeu060546.1 Olea europaea HOM05D000300 ORTHO05D008505 6.6e-60 235.3 203 66.0
TWI38G1039 Tripterygium wilfordii HOM05D000300 ORTHO05D008505 6.6e-60 235.3 203 65.0
CANSAT56G2812 Cannabis sativa HOM05D000300 ORTHO05D008505 8.7e-60 235.0 160 77.5
Prupe.4G183600 Prunus persica HOM05D000300 ORTHO05D008505 8.7e-60 235.0 203 65.0
Rhsim06G0197200 Rhododendron simsii HOM05D000300 ORTHO05D008505 1.1e-59 234.6 160 78.8
CiPaw.11G167900 Carya illinoinensis HOM05D000300 ORTHO05D008505 1.5e-59 234.2 160 79.4
Gorai.009G390800 Gossypium raimondii HOM05D000300 ORTHO05D008505 3.3e-59 233.0 203 65.0
vmacro11851 Vaccinium macrocarpon HOM05D000300 ORTHO05D008505 4.3e-59 232.6 160 78.1
Aqoxy1G02483 Aquilegia oxysepala HOM05D000300 ORTHO05D008505 5.6e-59 232.3 201 64.2
PGSC0003DMG400015358 Solanum tuberosum HOM05D000300 ORTHO05D008505 9.6e-59 231.5 160 77.5
FvH4_3g20100 Fragaria vesca HOM05D000300 ORTHO05D008505 1.6e-58 230.7 156 79.5
FAN11G2262 Fragaria x ananassa HOM05D000300 ORTHO05D008505 1.6e-58 230.7 156 79.5
Nn1g06576 Nelumbo nucifera HOM05D000300 ORTHO05D008505 1.6e-58 230.7 203 65.0
Thecc.07G080900 Theobroma cacao HOM05D000300 ORTHO05D008505 1.6e-58 230.7 160 77.5
FAN21G2789 Fragaria x ananassa HOM05D000300 ORTHO05D008505 8.1e-58 228.4 156 78.8
Sabra11G0105000 Salix brachista HOM05D000300 ORTHO05D008505 1.4e-57 227.6 161 78.3
BcaC04g20418 Brassica carinata HOM05D000300 ORTHO05D008505 1.8e-57 227.3 160 75.0
A10p11170 Brassica napus HOM05D000300 ORTHO05D008505 1.8e-57 227.3 160 75.0
C09p43740 Brassica napus HOM05D000300 ORTHO05D008505 1.8e-57 227.3 160 75.0
BolC9t57259H Brassica oleracea HOM05D000300 ORTHO05D008505 1.8e-57 227.3 160 75.0
BraA10t43209Z Brassica rapa HOM05D000300 ORTHO05D008505 1.8e-57 227.3 160 75.0
CSS0002162 Camellia sinensis var. sinensis HOM05D000300 ORTHO05D008505 1.8e-57 227.3 203 64.0
RcHm_v2.0_Chr5g0033901 Rosa chinensis HOM05D000300 ORTHO05D008505 2.4e-57 226.9 156 78.2
Medtr2g079460 Medicago truncatula HOM05D000300 ORTHO05D008505 4.0e-57 226.1 160 75.0
Thhalv10013922m.g Eutrema salsugineum HOM05D000300 ORTHO05D008505 6.9e-57 225.3 160 74.4
VMungo1080G0699 Vigna mungo HOM05D000300 ORTHO05D008505 6.9e-57 225.3 160 75.6
Ca_01834_v3 Cicer arietinum L. HOM05D000300 ORTHO05D008505 9.0e-57 224.9 149 80.5
Migut.M00819 Erythranthe guttata HOM05D000300 ORTHO05D008505 9.0e-57 224.9 200 63.5
Glyma.13G278100 Glycine max HOM05D000300 ORTHO05D008505 9.0e-57 224.9 160 75.0
BcaB08g35739 Brassica carinata HOM05D000300 ORTHO05D008505 1.2e-56 224.6 160 73.8
MD03G1225800 Malus domestica HOM05D000300 ORTHO05D008505 1.5e-56 224.2 160 75.0
PSO675G9140 Papaver somniferum HOM05D000300 ORTHO05D008505 1.5e-56 224.2 203 62.6
THA.LOC104813391 Tarenaya hassleriana HOM05D000300 ORTHO05D008505 1.5e-56 224.2 203 61.1
arahy.Tifrunner.gnm1.ann1.UT5NS3 Arachis hypogaea HOM05D000300 ORTHO05D008505 2.0e-56 223.8 160 75.6
arahy.Tifrunner.gnm1.ann1.Z7GNQ3 Arachis hypogaea HOM05D000300 ORTHO05D008505 2.0e-56 223.8 160 75.6
MD11G1245300 Malus domestica HOM05D000300 ORTHO05D008505 2.0e-56 223.8 160 75.0
Phvul.005G071500 Phaseolus vulgaris HOM05D000300 ORTHO05D008505 2.0e-56 223.8 160 75.0
Psat3g101080 Pisum sativum HOM05D000300 ORTHO05D008505 2.0e-56 223.8 160 75.6
Lj3g0005060 Lotus japonicus HOM05D000300 ORTHO05D008505 3.4e-56 223.0 160 75.0
AL8G28840 Arabidopsis lyrata HOM05D000300 ORTHO05D008505 5.8e-56 222.2 160 74.4
AT5G53800 Arabidopsis thaliana HOM05D000300 ORTHO05D008505 5.8e-56 222.2 160 74.4
Carub.0008s1409 Capsella rubella HOM05D000300 ORTHO05D008505 5.8e-56 222.2 160 73.8
PSO541G3772 Papaver somniferum HOM05D000300 ORTHO05D008505 5.8e-56 222.2 203 62.1
SalBow7G1295 Salvia bowleyana HOM05D000300 ORTHO05D008505 5.8e-56 222.2 201 63.2
SalBow7G3546 Salvia bowleyana HOM05D000300 ORTHO05D008505 5.8e-56 222.2 201 63.2
Atru.chr2.2664 Acer truncatum HOM05D000300 ORTHO05D008505 7.6e-56 221.9 160 74.4
Glyma.12G223300 Glycine max HOM05D000300 ORTHO05D008505 7.6e-56 221.9 160 74.4
Sp6g15870 Schrenkiella parvula HOM05D000300 ORTHO05D008505 7.6e-56 221.9 160 73.1
Lalb_Chr20g0109791 Lupinus albus HOM05D000300 ORTHO05D008505 9.9e-56 221.5 160 74.4
TPR.G38968 Trifolium pratense HOM05D000300 ORTHO05D008505 9.9e-56 221.5 160 74.4
CDE02G0965 Ceratophyllum demersum HOM05D000300 ORTHO05D008505 6.4e-55 218.8 153 76.5
Os04g0530300 Oryza sativa ssp. japonica HOM05D000300 ORTHO05D008505 5.4e-54 215.7 149 76.5
HPP92_025994 Vanilla planifolia HOM05D000300 ORTHO05D008505 7.1e-54 215.3 160 73.1
Cpa.g.sc80.49 Carica papaya HOM05D000300 ORTHO05D008505 2.1e-53 213.8 153 74.5
Aa31LG3G10120 Aethionema arabicum HOM05D000300 ORTHO05D008505 2.7e-53 213.4 188 63.3
ECA240G3136 Erigeron canadensis HOM05D000300 ORTHO05D008505 2.7e-53 213.4 157 72.6
ATR0680G062 Amborella trichopoda HOM05D000300 ORTHO05D008505 2.3e-52 210.3 201 60.2
Lsat_1_v5_gn_9_97040 Lactuca sativa HOM05D000300 ORTHO05D008505 3.0e-52 209.9 157 72.0
DCAR_013093 Daucus carota HOM05D000300 ORTHO05D008505 3.9e-52 209.5 160 71.2
PGR031G2267 Punica granatum HOM05D000300 ORTHO05D008505 5.1e-52 209.1 160 70.6
MD11G1245600 Malus domestica HOM05D000300 ORTHO05D008505 1.1e-51 208.0 150 76.0
Hma1.2p1_1738F.1_g299980 Hydrangea macrophylla HOM05D000300 ORTHO05D008505 1.9e-51 207.2 203 59.6
Sopen12g007100 Solanum pennellii HOM05D000300 ORTHO05D008505 7.3e-51 205.3 160 70.0
Nitab4.5_0007374g0020 Nicotiana tabacum HOM05D000300 ORTHO05D008505 9.6e-51 204.9 209 59.8
Sed0021435 Sechium edule HOM05D000300 ORTHO05D008505 2.1e-50 203.8 150 73.3
Solyc12g013790.3 Solanum lycopersicum HOM05D000300 ORTHO05D008505 2.1e-50 203.8 160 69.4
Mapoly0026s0140 Marchantia polymorpha HOM05D000300 ORTHO05D008505 3.1e-49 199.9 146 71.2
SEGI_35024 Sequoiadendron giganteum HOM05D000300 ORTHO05D008505 2.0e-48 197.2 197 54.8
Zm00001eb075780 Zea mays HOM05D000300 ORTHO05D008505 5.4e-46 189.1 185 58.4
SMO367G0821 Selaginella moellendorffii HOM05D000300 ORTHO05D008505 7.1e-46 188.7 147 66.7
HanXRQChr03g0078531 Helianthus annuus HOM05D000300 ORTHO05D008505 3.5e-45 186.4 144 70.8
Hund02219 Selenicereus undatus HOM05D000300 ORTHO05D008505 3.5e-45 186.4 150 68.7
Sc16g0006940 Simmondsia chinensis HOM05D000300 ORTHO05D008505 5.1e-44 182.6 174 60.3
Nitab4.5_0000662g0230 Nicotiana tabacum HOM05D000300 ORTHO05D008505 8.7e-44 181.8 181 60.8
Ah.04g164930 Amaranthus hybridus HOM05D000300 ORTHO05D008505 7.4e-43 178.7 146 67.1
AagrBONN_evm.TU.Sc2ySwM_340.171 Anthoceros agrestis HOM05D000300 ORTHO05D008505 1.3e-42 177.9 148 64.2
FAN16G2347 Fragaria x ananassa HOM05D000300 ORTHO05D008505 1.4e-41 174.5 118 81.4
Pp3c25_13690 Physcomitrium patens HOM05D000300 ORTHO05D008505 2.4e-38 163.7 149 60.4
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 9.6e-35 151.8 122 65.6
AUR62029376 Chenopodium quinoa HOM05D000300 ORTHO05D008505 3.9e-28 129.8 108 66.7
AUR62034261 Chenopodium quinoa HOM05D000300 ORTHO05D008505 1.1e-27 128.3 108 65.7
COL.COLO4_09413 Corchorus olitorius HOM05D000300 ORTHO05D008505 9.7e-27 125.2 93 79.6
EL10Ac4g08146 Beta vulgaris HOM05D000300 ORTHO05D008505 1.3e-23 114.8 166 46.4
Actinidia12817 Actinidia chinensis HOM05D000300 ORTHO05D008505 3.0e-20 103.6 103 54.4
Nn1g04059 Nelumbo nucifera HOM05D000300 ORTHO05D008505 3.0e-20 103.6 87 59.8
Cre03.g176050 Chlamydomonas reinhardtii HOM05D000300 ORTHO05D008505 1.5e-19 101.3 151 41.1
MCO10G111 Micromonas commoda HOM05D000300 ORTHO05D008505 7.4e-19 99.0 159 36.5
FAN25G2371 Fragaria x ananassa HOM05D000300 ORTHO05D008505 4.8e-18 96.3 59 76.3
GSVIVG01021702001 Vitis vinifera HOM05D000300 ORTHO05D008505 1.8e-17 94.4 80 73.8
GSVIVG01021454001 Vitis vinifera HOM05D000300 ORTHO05D008505 1.2e-16 91.7 80 71.2
AL8G13240 Arabidopsis lyrata HOM05D000300 ORTHO05D008505 2.6e-16 90.5 67 70.1
TAR626G1261 Trochodendron aralioides HOM05D000300 ORTHO05D008505 1.9e-14 84.3 69 72.5
MD11G1132100 Malus domestica HOM05D000300 ORTHO05D008505 7.2e-14 82.4 55 69.1
arahy.Tifrunner.gnm1.ann1.MM4FDC Arachis hypogaea HOM05D000300 ORTHO05D008505 1.2e-13 81.6 79 63.3
CBR_g12199 Chara braunii HOM05D000300 ORTHO05D008505 7.9e-13 79.0 57 63.2
FAN25G3258 Fragaria x ananassa HOM05D000300 ORTHO05D008505 2.3e-12 77.4 64 70.3
GSVIVG01014364001 Vitis vinifera HOM05D000300 ORTHO05D008505 1.4e-09 68.2 50 64.0
arahy.Tifrunner.gnm1.ann1.5AH57W Arachis hypogaea HOM05D000300 ORTHO05D008505 2.0e-08 64.3 51 74.5
arahy.Tifrunner.gnm1.ann1.MF7AUF Arachis hypogaea HOM05D003391 ORTHO05D008505 1.0e-07 62.0 40 80.0
arahy.Tifrunner.gnm1.ann1.VIP1CP Arachis hypogaea HOM05D000058 ORTHO05D008505 5.0e-07 59.7 32 84.4
arahy.Tifrunner.gnm1.ann1.F96EFF Arachis hypogaea HOM05D003444 ORTHO05D008505 1.9e-06 57.8 64 57.8


User provided reference genes

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