Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21568 Utricularia gibba HOM05D004389 ORTHO05D005457 6.1e-100 367.5 182 100.0
Oeu045484.1 Olea europaea HOM05D004389 ORTHO05D005457 3.7e-73 278.5 182 75.8
Migut.N00707 Erythranthe guttata HOM05D004389 ORTHO05D005457 4.1e-72 275.0 182 75.8
SGA_v2.0_scaffold16G07733 Striga asiatica HOM05D004389 ORTHO05D005457 2.2e-70 269.2 182 75.3
Cc02_g33710 Coffea canephora HOM05D004389 ORTHO05D005457 3.6e-68 261.9 182 71.4
PGR031G3032 Punica granatum HOM05D004389 ORTHO05D005457 1.0e-67 260.4 178 73.6
SGA_v2.0_scaffold11G05813 Striga asiatica HOM05D004389 ORTHO05D005457 1.8e-67 259.6 172 76.7
Thecc.05G307100 Theobroma cacao HOM05D004389 ORTHO05D005457 1.8e-67 259.6 182 71.4
Dinv23968 Davidia involucrata HOM05D004389 ORTHO05D005457 6.8e-67 257.7 182 72.0
COL.COLO4_29544 Corchorus olitorius HOM05D004389 ORTHO05D005457 1.2e-66 256.9 182 70.3
Nitab4.5_0002329g0100 Nicotiana tabacum HOM05D004389 ORTHO05D005457 1.2e-66 256.9 182 70.9
TWI73G0431 Tripterygium wilfordii HOM05D004389 ORTHO05D005457 1.2e-66 256.9 182 69.8
Gorai.004G242800 Gossypium raimondii HOM05D004389 ORTHO05D005457 1.5e-66 256.5 181 70.2
Hma1.2p1_0666F.1_g199560 Hydrangea macrophylla HOM05D004389 ORTHO05D005457 1.5e-66 256.5 182 72.5
Hma1.2p1_1362F.1_g278175 Hydrangea macrophylla HOM05D004389 ORTHO05D005457 1.5e-66 256.5 182 72.5
Glyma.05G086900 Glycine max HOM05D004389 ORTHO05D005457 2.0e-66 256.1 172 73.8
Nitab4.5_0002659g0010 Nicotiana tabacum HOM05D004389 ORTHO05D005457 2.0e-66 256.1 172 73.8
Glyma.06G240600 Glycine max HOM05D004389 ORTHO05D005457 2.6e-66 255.8 182 72.0
LjContig00312_ERROPOS870357g0027537 Lotus japonicus HOM05D004389 ORTHO05D005457 2.6e-66 255.8 181 72.4
Nn8g41138 Nelumbo nucifera HOM05D004389 ORTHO05D005457 2.6e-66 255.8 182 71.4
Haze_23899 Corylus avellana HOM05D004389 ORTHO05D005457 4.4e-66 255.0 181 70.7
Phvul.007G101500 Phaseolus vulgaris HOM05D004389 ORTHO05D005457 4.4e-66 255.0 172 75.0
Ciclev10018002m.g Citrus clementina HOM05D004389 ORTHO05D005457 5.7e-66 254.6 182 69.8
Duzib177G0146 Durio zibethinus HOM05D004389 ORTHO05D005457 5.7e-66 254.6 182 70.3
Gohir.A08G211800 Gossypium hirsutum HOM05D004389 ORTHO05D005457 5.7e-66 254.6 181 69.1
GSVIVG01006266001 Vitis vinifera HOM05D004389 ORTHO05D005457 5.7e-66 254.6 182 69.8
CiPaw.07G015300 Carya illinoinensis HOM05D004389 ORTHO05D005457 7.5e-66 254.2 181 69.6
Haze_04228 Corylus avellana HOM05D004389 ORTHO05D005457 7.5e-66 254.2 182 70.9
PSO782G4098 Papaver somniferum HOM05D004389 ORTHO05D005457 7.5e-66 254.2 179 73.2
QL03p004595 Quercus lobata HOM05D004389 ORTHO05D005457 9.8e-66 253.8 181 70.7
Aqoxy7G01925 Aquilegia oxysepala HOM05D004389 ORTHO05D005457 1.7e-65 253.1 181 71.3
MBI16_g00840_MAGBIO Magnolia biondii HOM05D004389 ORTHO05D005457 1.7e-65 253.1 182 69.2
TAR383G0075 Trochodendron aralioides HOM05D004389 ORTHO05D005457 1.7e-65 253.1 182 69.8
Medtr3g115100 Medicago truncatula HOM05D004389 ORTHO05D005457 2.2e-65 252.7 181 71.8
Manes.09G078200 Manihot esculenta HOM05D004389 ORTHO05D005457 2.8e-65 252.3 180 72.2
COL.COLO4_19842 Corchorus olitorius HOM05D004389 ORTHO05D005457 4.9e-65 251.5 182 69.2
Gohir.D08G228501 Gossypium hirsutum HOM05D004389 ORTHO05D005457 8.3e-65 250.8 181 68.5
Lj7A473T46 Lonicera japonica HOM05D004389 ORTHO05D005457 1.4e-64 250.0 172 74.4
Lj1g0012007 Lotus japonicus HOM05D004389 ORTHO05D005457 1.4e-64 250.0 181 70.2
ECA236G1487 Erigeron canadensis HOM05D004389 ORTHO05D005457 2.4e-64 249.2 172 70.9
Nitab4.5_0000401g0080 Nicotiana tabacum HOM05D004389 ORTHO05D005457 2.4e-64 249.2 182 69.2
PSO063G2909 Papaver somniferum HOM05D004389 ORTHO05D005457 3.1e-64 248.8 182 69.8
TPR.G33525 Trifolium pratense HOM05D004389 ORTHO05D005457 3.1e-64 248.8 172 75.0
EL10Ac4g09330 Beta vulgaris HOM05D004389 ORTHO05D005457 5.4e-64 248.1 174 71.3
Cfa006553 Carpinus fangiana HOM05D004389 ORTHO05D003318 5.4e-64 248.1 176 71.6
Eucgr.H04472 Eucalyptus grandis HOM05D004389 ORTHO05D005457 5.4e-64 248.1 182 68.1
Rhsim05G0143800 Rhododendron simsii HOM05D004389 ORTHO05D005457 7.0e-64 247.7 182 68.7
THA.LOC104805865 Tarenaya hassleriana HOM05D004389 ORTHO05D005457 7.0e-64 247.7 182 68.7
vmacro19638 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 7.0e-64 247.7 172 73.8
Lj9C683G9 Lonicera japonica HOM05D004389 ORTHO05D005457 9.2e-64 247.3 181 69.1
HPP92_010418 Vanilla planifolia HOM05D004389 ORTHO05D005457 9.2e-64 247.3 173 71.7
Actinidia05713 Actinidia chinensis HOM05D004389 ORTHO05D005457 1.2e-63 246.9 180 70.0
TAR626G0408 Trochodendron aralioides HOM05D004389 ORTHO05D005457 1.6e-63 246.5 182 69.2
Solyc12g009810.3 Solanum lycopersicum HOM05D004389 ORTHO05D005457 3.5e-63 245.4 172 72.1
Atru.chr2.467 Acer truncatum HOM05D004389 ORTHO05D005457 4.5e-63 245.0 182 67.0
PGSC0003DMG400030976 Solanum tuberosum HOM05D004389 ORTHO05D005457 5.9e-63 244.6 172 72.1
Sc16g0008410 Simmondsia chinensis HOM05D004389 ORTHO05D005457 7.7e-63 244.2 179 69.3
Sopen12g004700 Solanum pennellii HOM05D004389 ORTHO05D005457 7.7e-63 244.2 168 73.8
DCAR_008416 Daucus carota HOM05D004389 ORTHO05D005457 1.0e-62 243.8 172 72.7
Sabra05G0037000 Salix brachista HOM05D004389 ORTHO05D005457 1.0e-62 243.8 168 72.6
AUR62006921 Chenopodium quinoa HOM05D004389 ORTHO05D005457 1.3e-62 243.4 181 68.5
CSS0010710 Camellia sinensis var. sinensis HOM05D004389 ORTHO05D005457 1.7e-62 243.0 182 67.0
HanXRQChr14g0460141 Helianthus annuus HOM05D004389 ORTHO05D005457 1.7e-62 243.0 168 72.6
Medtr3g096610 Medicago truncatula HOM05D004389 ORTHO05D005457 1.7e-62 243.0 176 70.5
PGSC0003DMG402007838 Solanum tuberosum HOM05D004389 ORTHO05D005457 1.7e-62 243.0 182 68.7
Potri.005G036500 Populus trichocarpa HOM05D004389 ORTHO05D005457 2.3e-62 242.7 172 70.3
Potri.013G025600 Populus trichocarpa HOM05D004389 ORTHO05D005457 2.3e-62 242.7 183 66.7
CsaV3_1G039140 Cucumis sativus L. HOM05D004389 ORTHO05D005457 2.9e-62 242.3 182 68.1
Duzib128G0997 Durio zibethinus HOM05D004389 ORTHO05D005457 2.9e-62 242.3 182 67.6
MELO3C015339.2 Cucumis melo HOM05D004389 ORTHO05D005457 3.8e-62 241.9 182 68.1
Hund07052 Selenicereus undatus HOM05D004389 ORTHO05D005457 3.8e-62 241.9 196 64.8
CDE02G2165 Ceratophyllum demersum HOM05D004389 ORTHO05D005457 5.0e-62 241.5 181 67.4
Zm00001eb272600 Zea mays HOM05D004389 ORTHO05D005457 5.0e-62 241.5 167 73.7
arahy.Tifrunner.gnm1.ann1.95MSG7 Arachis hypogaea HOM05D004389 ORTHO05D005457 6.6e-62 241.1 172 69.8
CSS0006579 Camellia sinensis var. sinensis HOM05D004389 ORTHO05D005457 8.6e-62 240.7 182 66.5
FAN18G1342 Fragaria x ananassa HOM05D004389 ORTHO05D005457 8.6e-62 240.7 172 69.8
CANSAT21G2311 Cannabis sativa HOM05D004389 ORTHO05D005457 1.1e-61 240.4 171 70.2
AUR62005084 Chenopodium quinoa HOM05D004389 ORTHO05D005457 1.9e-61 239.6 168 70.8
CANSAT21G1920 Cannabis sativa HOM05D004389 ORTHO05D005457 2.5e-61 239.2 171 70.2
ClCG03G016830 Citrullus lanatus HOM05D004389 ORTHO05D005457 2.5e-61 239.2 181 69.1
Ciclev10002655m.g Citrus clementina HOM05D004389 ORTHO05D005457 2.5e-61 239.2 177 67.8
Sed0018697 Sechium edule HOM05D004389 ORTHO05D005457 2.5e-61 239.2 171 70.8
BcaNung00158 Brassica carinata HOM05D004389 ORTHO05D005457 5.6e-61 238.0 180 66.7
Ah.04g159790 Amaranthus hybridus HOM05D004389 ORTHO05D005457 7.3e-61 237.7 182 65.4
AUR62000890 Chenopodium quinoa HOM05D004389 ORTHO05D005457 1.2e-60 236.9 178 68.5
TWI53G0891 Tripterygium wilfordii HOM05D004389 ORTHO05D005457 1.2e-60 236.9 170 70.0
Aa31sc17G40 Aethionema arabicum HOM05D004389 ORTHO05D005457 2.8e-60 235.7 174 67.2
BcaB03g14176 Brassica carinata HOM05D004389 ORTHO05D005457 6.1e-60 234.6 180 66.1
MD04G1208300 Malus domestica HOM05D004389 ORTHO05D005457 6.1e-60 234.6 172 69.2
Zm00001eb264580 Zea mays HOM05D004389 ORTHO05D005457 6.1e-60 234.6 172 71.5
Aa31sc17G90 Aethionema arabicum HOM05D004389 ORTHO05D005457 8.0e-60 234.2 174 66.7
BcaC09g50404 Brassica carinata HOM05D004389 ORTHO05D005457 8.0e-60 234.2 180 66.7
Cpa.g.sc58.76 Carica papaya HOM05D004389 ORTHO05D005457 8.0e-60 234.2 182 63.7
C01p25870 Brassica napus HOM05D004389 ORTHO05D005457 1.4e-59 233.4 180 66.7
BolC1t02532H Brassica oleracea HOM05D004389 ORTHO05D005457 1.8e-59 233.0 180 66.1
FvH4_6g05471 Fragaria vesca HOM05D004389 ORTHO05D005457 2.3e-59 232.6 172 68.0
FAN05G0231 Fragaria x ananassa HOM05D004389 ORTHO05D005457 2.3e-59 232.6 172 68.6
FAN05G0672 Fragaria x ananassa HOM05D004389 ORTHO05D005457 2.3e-59 232.6 172 68.6
Sp7g15350 Schrenkiella parvula HOM05D004389 ORTHO05D005457 2.3e-59 232.6 182 66.5
A01p20570 Brassica napus HOM05D004389 ORTHO05D005457 4.0e-59 231.9 180 66.1
BraA01t01985Z Brassica rapa HOM05D004389 ORTHO05D005457 4.0e-59 231.9 180 66.1
Sabra13G0026700 Salix brachista HOM05D004389 ORTHO05D005457 4.0e-59 231.9 210 60.5
FvH4_5g27531 Fragaria vesca HOM05D004389 ORTHO05D005457 5.2e-59 231.5 163 71.2
FAN05G1752 Fragaria x ananassa HOM05D004389 ORTHO05D005457 8.9e-59 230.7 172 68.6
ATR0626G001 Amborella trichopoda HOM05D004389 ORTHO05D005457 1.2e-58 230.3 172 65.7
FAN05G0500 Fragaria x ananassa HOM05D004389 ORTHO05D005457 2.0e-58 229.6 172 68.0
Prupe.6G329200 Prunus persica HOM05D004389 ORTHO05D005457 2.6e-58 229.2 172 66.9
CARHR223240 Cardamine hirsuta HOM05D004389 ORTHO05D005457 3.4e-58 228.8 172 66.3
RcHm_v2.0_Chr3g0454251 Rosa chinensis HOM05D004389 ORTHO05D005457 3.4e-58 228.8 172 66.9
FAN09G0842 Fragaria x ananassa HOM05D004389 ORTHO05D005457 5.7e-58 228.0 172 67.4
FAN14G5008 Fragaria x ananassa HOM05D004389 ORTHO05D005457 9.8e-58 227.3 172 66.9
GSVIVG01000019001 Vitis vinifera HOM05D004389 ORTHO05D005457 1.3e-57 226.9 160 71.9
Peaxi162Scf00523g00530 Petunia axillaris HOM05D004389 ORTHO05D005457 1.7e-57 226.5 178 66.3
AUR62000567 Chenopodium quinoa HOM05D004389 ORTHO05D005457 2.9e-57 225.7 165 67.9
vmacro08924 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 3.7e-57 225.3 213 58.2
SEGI_15909 Sequoiadendron giganteum HOM05D004389 ORTHO05D005457 8.3e-57 224.2 172 65.7
Carub.0007s2468 Capsella rubella HOM05D004389 ORTHO05D005457 1.1e-56 223.8 172 66.3
AL7G38020 Arabidopsis lyrata HOM05D004389 ORTHO05D005457 1.4e-56 223.4 177 64.4
AT4G16710 Arabidopsis thaliana HOM05D004389 ORTHO05D005457 2.4e-56 222.6 182 63.7
HanXRQChr04g0126711 Helianthus annuus HOM05D004389 ORTHO05D005457 4.1e-56 221.9 172 66.3
Thhalv10026361m.g Eutrema salsugineum HOM05D004389 ORTHO05D005457 5.4e-56 221.5 181 62.4
Lsat_1_v5_gn_7_96081 Lactuca sativa HOM05D004389 ORTHO05D005457 1.6e-55 219.9 173 65.3
Rhsim05G0010600 Rhododendron simsii HOM05D004389 ORTHO05D005457 1.0e-54 217.2 201 57.7
Psat0s1802g0120 Pisum sativum HOM05D004389 ORTHO05D005457 5.6e-53 211.5 153 71.2
Psat0s2070g0160 Pisum sativum HOM05D004389 ORTHO05D005457 1.2e-52 210.3 153 70.6
Lalb_Chr05g0219701 Lupinus albus HOM05D004389 ORTHO05D005457 4.0e-51 205.3 178 62.4
RcHm_v2.0_Chr7g0218901 Rosa chinensis HOM05D004389 ORTHO05D005457 4.0e-51 205.3 149 68.5
AagrBONN_evm.TU.Sc2ySwM_117.3666 Anthoceros agrestis HOM05D004389 ORTHO05D005457 1.8e-43 179.9 177 51.4
SMO171G0140 Selaginella moellendorffii HOM05D004389 ORTHO05D005457 5.2e-43 178.3 165 53.9
Dinv40263 Davidia involucrata HOM05D004389 ORTHO05D005457 9.8e-42 174.1 122 72.1
AagrBONN_evm.TU.Sc2ySwM_344.4143 Anthoceros agrestis HOM05D007251 ORTHO05D009266 2.2e-41 172.9 177 50.3
Mapoly0013s0083 Marchantia polymorpha HOM05D004389 ORTHO05D005457 2.4e-40 169.5 167 51.5
Peaxi162Scf02135g00022 Petunia axillaris HOM05D004389 ORTHO05D005457 1.2e-39 167.2 172 57.0
Os02g0467700 Oryza sativa ssp. japonica HOM05D004389 ORTHO05D005457 2.1e-39 166.4 123 69.1
Aqoxy4G02160 Aquilegia oxysepala HOM05D004389 ORTHO05D005457 2.7e-39 166.0 112 75.9
Pp3c11_4930 Physcomitrium patens HOM05D004389 ORTHO05D005457 4.6e-39 165.2 168 49.4
vmacro22564 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 3.0e-38 162.5 173 53.8
Prupe.5G030200 Prunus persica HOM05D004389 ORTHO05D005457 5.1e-38 161.8 118 72.0
PRCOL_00003734 Prasinoderma coloniale HOM05D004389 ORTHO05D005457 3.3e-37 159.1 160 51.9
Cre13.g585850 Chlamydomonas reinhardtii HOM05D004389 ORTHO05D005457 1.2e-36 157.1 172 50.0
CBR_g24390 Chara braunii HOM05D004389 ORTHO05D005457 2.0e-34 149.8 230 40.0
CAN.G551.74 Capsicum annuum HOM05D004389 ORTHO05D005457 9.9e-34 147.5 107 71.0
vmacro15018 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 4.1e-32 142.1 163 50.3
MCO09G816 Micromonas commoda HOM05D004389 ORTHO05D005457 9.2e-32 141.0 163 47.2
vmacro22211 Vaccinium macrocarpon HOM05D004389 ORTHO05D005457 1.7e-30 136.7 188 45.2
Ca_16978_v3 Cicer arietinum L. HOM05D004389 ORTHO05D005457 8.6e-30 134.4 86 75.6
Zm00001eb058290 Zea mays HOM05D004389 ORTHO05D005457 9.6e-29 131.0 82 78.0
TPR.G33563 Trifolium pratense HOM05D004389 ORTHO05D005457 1.1e-27 127.5 83 74.7
Nitab4.5_0006964g0010 Nicotiana tabacum HOM05D004389 ORTHO05D005457 1.3e-25 120.6 96 62.5
RhsimUnG0192500 Rhododendron simsii HOM05D004389 ORTHO05D005457 1.4e-24 117.1 83 67.5
Aqoxy5G02271 Aquilegia oxysepala HOM05D004389 ORTHO05D005457 4.2e-24 115.5 93 61.3
TPR.G30972 Trifolium pratense HOM05D004389 ORTHO05D005457 4.2e-24 115.5 91 64.8
SHI18162 Sapria himalayana HOM05D004389 ORTHO05D005457 7.8e-23 111.3 142 45.8
Zm00001eb380920 Zea mays HOM05D004389 ORTHO05D005457 3.9e-22 109.0 85 63.5
MD15G1188200 Malus domestica HOM05D004389 ORTHO05D005457 4.0e-19 99.0 115 50.4
QL07p009462 Quercus lobata HOM05D004389 ORTHO05D005457 2.0e-18 96.7 78 61.5
FvH4_6g10990 Fragaria vesca HOM05D004389 ORTHO05D005457 9.9e-18 94.4 90 55.6
Actinidia39666 Actinidia chinensis HOM05D004389 ORTHO05D056204 4.9e-17 92.0 141 41.8
vmacro15154 Vaccinium macrocarpon HOM05D004389 ORTHO05D022937 2.3e-14 83.2 52 73.1
SHI18161 Sapria himalayana HOM05D004389 ORTHO05D005457 9.6e-13 77.8 52 65.4
Cfa025624 Carpinus fangiana HOM05D004389 ORTHO05D125512 6.2e-12 75.1 161 37.9
HPP92_010328 Vanilla planifolia HOM05D004389 ORTHO05D022937 5.3e-11 72.0 60 51.7
Medtr6g452950 Medicago truncatula HOM05D029366 ORTHO05D022937 1.5e-10 70.5 41 78.0
QL07p009230 Quercus lobata HOM05D004389 ORTHO05D005457 1.2e-07 60.8 88 40.9
vmacro17239 Vaccinium macrocarpon HOM05D040504 ORTHO05D426804 4.6e-07 58.9 149 30.9
CDE04G0800 Ceratophyllum demersum HOM05D000328 ORTHO05D000191 8.7e-06 54.7 35 68.6


User provided reference genes

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