Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21547 Utricularia gibba HOM05D001663 ORTHO05D005717 1.6e-219 765.8 385 100.0
SGA_v2.0_scaffold48G18009 Striga asiatica HOM05D001663 ORTHO05D005717 1.6e-142 510.0 449 62.6
MSTRG.24955 Avicennia marina HOM05D001663 ORTHO05D005717 2.1e-142 509.6 478 59.2
Migut.C00211 Erythranthe guttata HOM05D001663 ORTHO05D005717 9.7e-140 500.7 475 58.3
Cc10_g06030 Coffea canephora HOM05D001663 ORTHO05D005717 9.7e-132 474.2 477 53.7
CSS0006833 Camellia sinensis var. sinensis HOM05D001663 ORTHO05D005717 1.8e-130 469.9 480 55.2
PGR042G1550 Punica granatum HOM05D001663 ORTHO05D005717 2.4e-130 469.5 449 56.6
Dinv44724 Davidia involucrata HOM05D001663 ORTHO05D005717 1.0e-128 464.2 477 55.1
Prupe.1G508500 Prunus persica HOM05D001663 ORTHO05D005717 3.6e-126 455.7 477 52.8
Ciclev10001001m.g Citrus clementina HOM05D001663 ORTHO05D005717 6.1e-126 454.9 477 53.0
GSVIVG01008963001 Vitis vinifera HOM05D001663 ORTHO05D005717 8.0e-126 454.5 477 53.9
Manes.18G101600 Manihot esculenta HOM05D001663 ORTHO05D005717 8.8e-125 451.1 477 52.6
SalBow7G1241 Salvia bowleyana HOM05D001663 ORTHO05D005717 1.2e-124 450.7 539 50.8
FvH4_5g38340 Fragaria vesca HOM05D001663 ORTHO05D005717 7.5e-124 448.0 477 52.8
Rhsim07G0199300 Rhododendron simsii HOM05D001663 ORTHO05D005717 9.8e-124 447.6 483 52.8
vmacro04774 Vaccinium macrocarpon HOM05D001663 ORTHO05D005717 1.3e-123 447.2 513 50.1
Cpa.g.sc1782.1 Carica papaya HOM05D001663 ORTHO05D005717 1.7e-123 446.8 477 52.6
CiPaw.05G231300 Carya illinoinensis HOM05D001663 ORTHO05D005717 2.8e-123 446.0 480 52.9
HanXRQChr05g0162261 Helianthus annuus HOM05D001663 ORTHO05D005717 3.7e-123 445.7 477 53.0
Nn5g28968 Nelumbo nucifera HOM05D001663 ORTHO05D005717 3.7e-123 445.7 477 52.0
Nitab4.5_0004952g0050 Nicotiana tabacum HOM05D001663 ORTHO05D005717 3.7e-123 445.7 475 53.1
Nitab4.5_0001915g0140 Nicotiana tabacum HOM05D001663 ORTHO05D005717 6.3e-123 444.9 479 52.6
Peaxi162Scf00756g00434 Petunia axillaris HOM05D001663 ORTHO05D005717 1.4e-122 443.7 441 56.2
TAR376G0684 Trochodendron aralioides HOM05D001663 ORTHO05D005717 2.4e-122 443.0 484 51.4
PGSC0003DMG400027563 Solanum tuberosum HOM05D001663 ORTHO05D005717 3.1e-122 442.6 482 52.7
MSTRG.947 Avicennia marina HOM05D001663 ORTHO05D005717 5.4e-122 441.8 479 54.1
FAN18G1299 Fragaria x ananassa HOM05D001663 ORTHO05D005717 5.4e-122 441.8 483 51.8
FAN08G2783 Fragaria x ananassa HOM05D001663 ORTHO05D005717 1.2e-121 440.7 476 52.3
FAN04G0194 Fragaria x ananassa HOM05D001663 ORTHO05D005717 2.0e-121 439.9 472 52.5
Solyc04g072440.4 Solanum lycopersicum HOM05D001663 ORTHO05D005717 2.7e-121 439.5 483 52.2
Hma1.2p1_0529F.1_g173150 Hydrangea macrophylla HOM05D001663 ORTHO05D005717 3.5e-121 439.1 483 52.6
CAN.G617.5 Capsicum annuum HOM05D001663 ORTHO05D005717 4.5e-121 438.7 483 52.2
Ca_26536_v3 Cicer arietinum L. HOM05D001663 ORTHO05D005717 4.5e-121 438.7 478 51.5
RhsimUnG0073000 Rhododendron simsii HOM05D001663 ORTHO05D005717 5.9e-121 438.3 483 52.4
Sopen04g028600 Solanum pennellii HOM05D001663 ORTHO05D005717 5.9e-121 438.3 483 52.0
ECA246G3782 Erigeron canadensis HOM05D001663 ORTHO05D005717 1.3e-120 437.2 473 52.0
COL.COLO4_16510 Corchorus olitorius HOM05D001663 ORTHO05D005717 2.3e-120 436.4 476 51.7
Lalb_Chr10g0102081 Lupinus albus HOM05D001663 ORTHO05D005717 3.8e-120 435.6 477 51.6
MD15G1361100 Malus domestica HOM05D001663 ORTHO05D005717 3.8e-120 435.6 473 53.3
Eucgr.H00930 Eucalyptus grandis HOM05D001663 ORTHO05D005717 5.0e-120 435.3 477 51.4
QL12p035556 Quercus lobata HOM05D001663 ORTHO05D005717 6.5e-120 434.9 479 51.8
Duzib041G0602 Durio zibethinus HOM05D001663 ORTHO05D005717 8.6e-120 434.5 478 50.8
Thecc.08G114700 Theobroma cacao HOM05D001663 ORTHO05D005717 2.8e-118 429.5 478 51.0
MD08G1174500 Malus domestica HOM05D001663 ORTHO05D005717 3.6e-118 429.1 476 52.1
Lalb_Chr04g0253241 Lupinus albus HOM05D001663 ORTHO05D005717 4.7e-118 428.7 478 51.0
Medtr5g061040 Medicago truncatula HOM05D001663 ORTHO05D005717 6.1e-118 428.3 474 51.3
Phvul.008G169200 Phaseolus vulgaris HOM05D001663 ORTHO05D005717 6.1e-118 428.3 479 51.8
TPR.G30426 Trifolium pratense HOM05D001663 ORTHO05D005717 8.0e-118 427.9 478 50.6
TWI12G1423 Tripterygium wilfordii HOM05D001663 ORTHO05D005717 8.0e-118 427.9 475 50.9
TWI56G1202 Tripterygium wilfordii HOM05D001663 ORTHO05D005717 8.0e-118 427.9 475 50.5
Lj1g0004140 Lotus japonicus HOM05D001663 ORTHO05D005717 1.4e-117 427.2 478 50.8
Nn1g05239 Nelumbo nucifera HOM05D001663 ORTHO05D005717 3.0e-117 426.0 477 50.3
Gohir.D02G082500 Gossypium hirsutum HOM05D001663 ORTHO05D005717 4.0e-117 425.6 468 50.4
Duzib093G0504 Durio zibethinus HOM05D001663 ORTHO05D005717 5.2e-117 425.2 478 50.2
EL10Ac8g18308 Beta vulgaris HOM05D001663 ORTHO05D005717 6.8e-117 424.9 473 50.3
Gorai.005G092500 Gossypium raimondii HOM05D001663 ORTHO05D005717 1.2e-116 424.1 476 49.8
Gohir.A02G075400 Gossypium hirsutum HOM05D001663 ORTHO05D005717 5.7e-116 421.8 476 49.2
DCAR_003554 Daucus carota HOM05D001663 ORTHO05D005717 1.3e-115 420.6 475 50.7
Actinidia29571 Actinidia chinensis HOM05D001663 ORTHO05D005717 4.9e-115 418.7 398 58.5
Aa31LG9G14450 Aethionema arabicum HOM05D001663 ORTHO05D005717 6.3e-115 418.3 478 50.6
Gohir.D05G269900 Gossypium hirsutum HOM05D001663 ORTHO05D005717 5.4e-114 415.2 478 49.2
Gorai.009G282600 Gossypium raimondii HOM05D001663 ORTHO05D005717 7.0e-114 414.8 478 49.2
Ah.09g230050 Amaranthus hybridus HOM05D001663 ORTHO05D005717 9.2e-114 414.5 477 50.3
Potri.002G090900 Populus trichocarpa HOM05D001663 ORTHO05D005717 4.5e-113 412.1 477 50.1
Sabra02G0071900 Salix brachista HOM05D001663 ORTHO05D005717 1.3e-112 410.6 494 48.2
Aqoxy3G00244 Aquilegia oxysepala HOM05D001663 ORTHO05D005717 5.0e-112 408.7 506 46.0
Haze_00550 Corylus avellana HOM05D001663 ORTHO05D005717 5.0e-112 408.7 459 51.4
Lj6A263G20 Lonicera japonica HOM05D001663 ORTHO05D005717 1.1e-111 407.5 451 52.1
PSO210G6007 Papaver somniferum HOM05D001663 ORTHO05D005717 1.1e-111 407.5 478 47.3
arahy.Tifrunner.gnm1.ann1.7M6WCL Arachis hypogaea HOM05D001663 ORTHO05D005717 1.5e-111 407.1 477 49.5
PSO447G0047 Papaver somniferum HOM05D001663 ORTHO05D005717 1.5e-111 407.1 478 47.3
CANSAT25G1457 Cannabis sativa HOM05D001663 ORTHO05D005717 1.9e-111 406.8 482 48.5
Thhalv10028627m.g Eutrema salsugineum HOM05D001663 ORTHO05D005717 3.3e-111 406.0 477 48.4
FAN13G3230 Fragaria x ananassa HOM05D001663 ORTHO05D005717 3.3e-111 406.0 405 56.0
Glyma.13G085400 Glycine max HOM05D001663 ORTHO05D005717 4.3e-111 405.6 478 49.0
Sp6g09330 Schrenkiella parvula HOM05D001663 ORTHO05D005717 2.8e-110 402.9 477 48.6
BcaC04g20910 Brassica carinata HOM05D001663 ORTHO05D005717 5.2e-109 398.7 476 48.7
C09p38040 Brassica napus HOM05D001663 ORTHO05D005717 5.2e-109 398.7 476 48.7
BolC9t56640H Brassica oleracea HOM05D001663 ORTHO05D005717 5.2e-109 398.7 476 48.7
A09p30170 Brassica napus HOM05D001663 ORTHO05D005717 8.9e-109 397.9 476 47.9
CARHR259570 Cardamine hirsuta HOM05D001663 ORTHO05D005717 8.9e-109 397.9 471 48.4
THA.LOC104816946 Tarenaya hassleriana HOM05D001663 ORTHO05D005717 2.6e-108 396.4 479 47.6
AT4G08540 Arabidopsis thaliana HOM05D001663 ORTHO05D005717 4.9e-107 392.1 477 48.0
BcaB01g01352 Brassica carinata HOM05D001663 ORTHO05D005717 4.9e-107 392.1 476 47.7
THA.LOC104813136 Tarenaya hassleriana HOM05D001663 ORTHO05D005717 6.4e-107 391.7 483 48.9
Lsat_1_v5_gn_6_102021 Lactuca sativa HOM05D001663 ORTHO05D005717 2.4e-106 389.8 477 49.3
RcHm_v2.0_Chr7g0240361 Rosa chinensis HOM05D001663 ORTHO05D005717 1.3e-104 384.0 427 52.0
Carub.0006s2708 Capsella rubella HOM05D001663 ORTHO05D005717 2.3e-104 383.3 476 47.7
AUR62033240 Chenopodium quinoa HOM05D001663 ORTHO05D005717 6.8e-101 371.7 423 50.4
Cfa015941 Carpinus fangiana HOM05D001663 ORTHO05D005717 2.6e-100 369.8 459 48.8
AL6G42350 Arabidopsis lyrata HOM05D001663 ORTHO05D005717 1.3e-99 367.5 454 49.3
AUR62021323 Chenopodium quinoa HOM05D001663 ORTHO05D005717 3.0e-96 356.3 450 46.4
CsaV3_2G033570 Cucumis sativus L. HOM05D001663 ORTHO05D005717 1.5e-95 354.0 477 45.7
Hund26324 Selenicereus undatus HOM05D001663 ORTHO05D005717 2.5e-95 353.2 382 51.6
MELO3C008130.2 Cucumis melo HOM05D001663 ORTHO05D005717 7.3e-95 351.7 476 45.4
Glyma.14G167200 Glycine max HOM05D001663 ORTHO05D005717 2.1e-94 350.1 409 49.4
Sed0003415 Sechium edule HOM05D001663 ORTHO05D005717 2.0e-92 343.6 468 44.2
ClCG11G008030 Citrullus lanatus HOM05D001663 ORTHO05D005717 1.4e-90 337.4 504 42.7
CSS0003227 Camellia sinensis var. sinensis HOM05D001663 ORTHO05D005717 2.5e-87 326.6 336 54.5
Dinv13062 Davidia involucrata HOM05D001663 ORTHO05D005717 2.5e-87 326.6 299 59.2
BraA09t38581Z Brassica rapa HOM05D001663 ORTHO05D005717 1.1e-85 321.2 576 37.3
Atru.chr13.1295 Acer truncatum HOM05D001663 ORTHO05D005717 3.2e-82 309.7 336 53.0
Psat2g076640 Pisum sativum HOM05D001663 ORTHO05D005717 7.1e-82 308.5 413 45.5
Sc18g0007560 Simmondsia chinensis HOM05D001663 ORTHO05D005717 3.9e-80 302.8 298 54.0
ATR0564G349 Amborella trichopoda HOM05D001663 ORTHO05D005717 1.5e-79 300.8 482 40.2
Gohir.A05G268300 Gossypium hirsutum HOM05D001663 ORTHO05D005717 7.6e-76 288.5 311 51.1
MBI02_g34272_MAGBIO Magnolia biondii HOM05D001663 ORTHO05D005717 1.3e-75 287.7 313 51.1
Oeu035400.3 Olea europaea HOM05D001663 ORTHO05D005717 1.2e-68 264.6 809 29.4
HPP92_009232 Vanilla planifolia HOM05D001663 ORTHO05D005717 7.1e-66 255.4 341 42.8
CDE05G2350 Ceratophyllum demersum HOM05D001663 ORTHO05D005717 4.6e-65 252.7 349 43.8
Carub.0002s2479 Capsella rubella HOM05D001663 ORTHO05D005717 9.9e-60 235.0 452 37.6
AL2G38170 Arabidopsis lyrata HOM05D001663 ORTHO05D005717 1.9e-58 230.7 452 36.9
VMungo0647G1200 Vigna mungo HOM05D001663 ORTHO05D005717 4.6e-57 226.1 226 53.5
Zm00001eb327970 Zea mays HOM05D001663 ORTHO05D005717 4.6e-57 226.1 446 35.0
Aa31LG4G7980 Aethionema arabicum HOM05D001663 ORTHO05D005717 6.0e-57 225.7 474 34.2
AT1G77890 Arabidopsis thaliana HOM05D001663 ORTHO05D005717 7.9e-57 225.3 452 36.5
CARHR071380 Cardamine hirsuta HOM05D001663 ORTHO05D005717 4.3e-55 219.5 450 36.0
Zm00001eb109770 Zea mays HOM05D001663 ORTHO05D005717 7.4e-55 218.8 408 35.8
arahy.Tifrunner.gnm1.ann1.ZLN6KV Arachis hypogaea HOM05D001663 ORTHO05D005717 9.6e-55 218.4 231 53.2
BolC6t40206H Brassica oleracea HOM05D001663 ORTHO05D005717 2.1e-54 217.2 448 35.5
BcaB03g15913 Brassica carinata HOM05D001663 ORTHO05D005717 3.7e-54 216.5 446 35.4
Sp5g33060 Schrenkiella parvula HOM05D001663 ORTHO05D005717 6.2e-54 215.7 450 35.3
BraA07t31838Z Brassica rapa HOM05D001663 ORTHO05D005717 1.4e-53 214.5 448 35.3
Pp3c5_11170 Physcomitrium patens HOM05D001663 ORTHO05D005717 1.2e-52 211.5 481 32.8
Os07g0626300 Oryza sativa ssp. japonica HOM05D001663 ORTHO05D005717 2.0e-52 210.7 403 35.7
Actinidia33165 Actinidia chinensis HOM05D001663 ORTHO05D005717 7.6e-52 208.8 248 50.0
C06p51850 Brassica napus HOM05D001663 ORTHO05D005717 1.2e-49 201.4 336 39.3
A07p43160 Brassica napus HOM05D001663 ORTHO05D005717 4.6e-49 199.5 337 38.6
arahy.Tifrunner.gnm1.ann1.8X036G Arachis hypogaea HOM05D001663 ORTHO05D005717 5.1e-48 196.1 249 46.2
Mapoly0103s0077 Marchantia polymorpha HOM05D001663 ORTHO05D005717 3.2e-42 176.8 474 30.6
Thhalv10018451m.g Eutrema salsugineum HOM05D001663 ORTHO05D005717 4.1e-37 159.8 427 32.6
Actinidia33166 Actinidia chinensis HOM05D001663 ORTHO05D005717 7.9e-33 145.6 106 67.9
Atru.chr13.1296 Acer truncatum HOM05D001663 ORTHO05D005717 1.5e-31 141.4 102 66.7
MBI02_g34271_MAGBIO Magnolia biondii HOM05D001663 ORTHO05D005717 8.2e-30 135.6 139 51.1
AagrBONN_evm.TU.Sc2ySwM_344.1096 Anthoceros agrestis HOM05D001663 ORTHO05D005717 3.1e-29 133.7 348 31.3
SEGI_08259 Sequoiadendron giganteum HOM05D001663 ORTHO05D005717 2.9e-27 127.1 308 33.4
SEGI_31098 Sequoiadendron giganteum HOM05D001663 ORTHO05D005717 5.0e-27 126.3 192 42.7
BcaC08g47627 Brassica carinata HOM05D001663 ORTHO05D005717 1.9e-26 124.4 204 39.7
CBR_g4197 Chara braunii HOM05D001663 ORTHO05D005717 3.7e-22 110.2 257 31.1
CDE05G1781 Ceratophyllum demersum HOM05D001663 ORTHO05D005717 2.9e-11 73.9 88 43.2
Dinv13063 Davidia involucrata HOM05D001663 ORTHO05D005717 3.2e-10 70.5 77 51.9
Cre08.g377600 Chlamydomonas reinhardtii HOM05D001663 ORTHO05D005717 2.6e-07 60.8 34 64.7
PRCOL_00005117 Prasinoderma coloniale HOM05D001663 ORTHO05D005717 8.3e-06 55.8 116 32.8
Zm00001eb031630 Zea mays HOM05D001663 ORTHO05D005717 8.3e-06 55.8 101 33.7


User provided reference genes

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