Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21528 Utricularia gibba HOM05D006579 ORTHO05D007783 1.3e-129 466.5 251 100.0
SalBow3G0048 Salvia bowleyana HOM05D006579 ORTHO05D007783 4.5e-69 265.4 282 61.0
Migut.D00005 Erythranthe guttata HOM05D006579 ORTHO05D007783 7.6e-69 264.6 285 61.4
Oeu038082.1 Olea europaea HOM05D006579 ORTHO05D007783 2.2e-68 263.1 281 59.1
MSTRG.18055 Avicennia marina HOM05D006579 ORTHO05D007783 2.9e-68 262.7 269 60.6
Nitab4.5_0001628g0050 Nicotiana tabacum HOM05D006579 ORTHO05D007783 4.2e-67 258.8 293 58.4
HanXRQChr01g0017841 Helianthus annuus HOM05D006579 ORTHO05D007783 2.1e-66 256.5 292 56.5
Cc06_g22680 Coffea canephora HOM05D006579 ORTHO05D007783 2.7e-66 256.1 288 58.7
Ciclev10021552m.g Citrus clementina HOM05D006579 ORTHO05D007783 2.3e-65 253.1 255 61.6
Dinv33186 Davidia involucrata HOM05D006579 ORTHO05D007783 2.3e-65 253.1 287 57.8
Cpa.g.sc57.48 Carica papaya HOM05D006579 ORTHO05D007783 5.7e-64 248.4 276 57.2
Thecc.01G328000 Theobroma cacao HOM05D006579 ORTHO05D007783 9.7e-64 247.7 285 57.5
Nitab4.5_0002103g0080 Nicotiana tabacum HOM05D006579 ORTHO05D007783 2.2e-63 246.5 291 56.4
Nn8g39570 Nelumbo nucifera HOM05D006579 ORTHO05D007783 1.8e-62 243.4 283 57.2
Duzib138G1509 Durio zibethinus HOM05D006579 ORTHO05D007783 2.4e-62 243.0 285 56.8
Gohir.D11G111000 Gossypium hirsutum HOM05D006579 ORTHO05D007783 3.1e-62 242.7 282 55.3
Potri.014G110200 Populus trichocarpa HOM05D006579 ORTHO05D007783 4.1e-62 242.3 283 54.4
CAN.G179.22 Capsicum annuum HOM05D006579 ORTHO05D007783 1.2e-61 240.7 289 56.1
Gorai.007G118800 Gossypium raimondii HOM05D006579 ORTHO05D007783 1.2e-61 240.7 282 55.0
PGR042G1939 Punica granatum HOM05D006579 ORTHO05D007783 1.5e-61 240.4 289 56.4
Hund07814 Selenicereus undatus HOM05D006579 ORTHO05D007783 1.5e-61 240.4 280 56.4
ATR0796G267 Amborella trichopoda HOM05D006579 ORTHO05D007783 2.0e-61 240.0 280 56.4
Manes.14G164500 Manihot esculenta HOM05D006579 ORTHO05D007783 2.6e-61 239.6 286 54.5
THA.LOC104825921 Tarenaya hassleriana HOM05D006579 ORTHO05D007783 2.6e-61 239.6 288 54.5
Gohir.A11G106100 Gossypium hirsutum HOM05D006579 ORTHO05D007783 3.4e-61 239.2 276 54.7
TAR362G0572 Trochodendron aralioides HOM05D006579 ORTHO05D007783 3.4e-61 239.2 286 55.2
COL.COLO4_23096 Corchorus olitorius HOM05D006579 ORTHO05D007783 5.9e-61 238.4 284 54.6
Solyc01g068580.4 Solanum lycopersicum HOM05D006579 ORTHO05D007783 5.9e-61 238.4 290 54.5
SGA_v2.0_scaffold417G51243 Striga asiatica HOM05D006579 ORTHO05D007783 7.7e-61 238.0 315 54.3
Sopen01g030530 Solanum pennellii HOM05D006579 ORTHO05D007783 1.0e-60 237.7 292 54.8
ECA248G0873 Erigeron canadensis HOM05D006579 ORTHO05D007783 3.8e-60 235.7 293 55.3
Eucgr.A00989 Eucalyptus grandis HOM05D006579 ORTHO05D007783 6.5e-60 235.0 287 54.7
MBI15_g35678_MAGBIO Magnolia biondii HOM05D006579 ORTHO05D007783 1.4e-59 233.8 284 55.3
Ca_10226_v3 Cicer arietinum L. HOM05D006579 ORTHO05D007783 1.9e-59 233.4 290 53.8
DCAR_018237 Daucus carota HOM05D006579 ORTHO05D007783 1.9e-59 233.4 288 55.9
Cfa004929 Carpinus fangiana HOM05D006579 ORTHO05D007783 2.5e-59 233.0 296 53.4
Lsat_1_v5_gn_1_78561 Lactuca sativa HOM05D006579 ORTHO05D007783 6.1e-58 228.4 231 59.3
Glyma.02G006400 Glycine max HOM05D006579 ORTHO05D007783 1.8e-57 226.9 291 52.9
CANSAT25G2874 Cannabis sativa HOM05D006579 ORTHO05D007783 3.9e-57 225.7 301 50.8
Sabra14G0081200 Salix brachista HOM05D006579 ORTHO05D007783 6.7e-57 224.9 314 49.0
arahy.Tifrunner.gnm1.ann1.E1WP71 Arachis hypogaea HOM05D006579 ORTHO05D007783 8.8e-57 224.6 258 57.0
CARHR001640 Cardamine hirsuta HOM05D006579 ORTHO05D007783 8.8e-57 224.6 290 52.4
Sc12g0008270 Simmondsia chinensis HOM05D006579 ORTHO05D007783 8.8e-57 224.6 277 54.5
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 1.1e-56 224.2 258 57.0
Carub.0001s0137 Capsella rubella HOM05D006579 ORTHO05D007783 1.1e-56 224.2 289 52.2
Lj5g0006855 Lotus japonicus HOM05D006579 ORTHO05D007783 1.1e-56 224.2 293 53.2
PGSC0003DMG400000840 Solanum tuberosum HOM05D006579 ORTHO05D007783 1.1e-56 224.2 327 48.0
Atru.chr5.832 Acer truncatum HOM05D006579 ORTHO05D007783 1.5e-56 223.8 251 56.2
CiPaw.07G127500 Carya illinoinensis HOM05D006579 ORTHO05D007783 2.5e-56 223.0 301 51.5
TWI23G0058 Tripterygium wilfordii HOM05D006579 ORTHO05D007783 3.3e-56 222.6 285 52.6
Aqoxy2G02395 Aquilegia oxysepala HOM05D006579 ORTHO05D007783 9.7e-56 221.1 298 52.3
EL10Ac9g20927 Beta vulgaris HOM05D006579 ORTHO05D007783 1.3e-55 220.7 279 54.1
Lalb_Chr21g0309921 Lupinus albus HOM05D006579 ORTHO05D007783 1.3e-55 220.7 295 52.2
TPR.G3075 Trifolium pratense HOM05D006579 ORTHO05D007783 1.3e-55 220.7 297 51.5
HPP92_026046 Vanilla planifolia HOM05D006579 ORTHO05D007783 1.3e-55 220.7 286 53.1
VMungo0720G0607 Vigna mungo HOM05D006579 ORTHO05D007783 1.3e-55 220.7 258 56.2
Phvul.007G207700 Phaseolus vulgaris HOM05D006579 ORTHO05D007783 2.2e-55 219.9 291 51.9
Psat6g157680 Pisum sativum HOM05D006579 ORTHO05D007783 2.2e-55 219.9 292 51.7
Aa31LG1G10170 Aethionema arabicum HOM05D006579 ORTHO05D007783 4.8e-55 218.8 255 54.1
Medtr1g085470 Medicago truncatula HOM05D006579 ORTHO05D007783 4.8e-55 218.8 259 56.0
GSVIVG01028219001 Vitis vinifera HOM05D006579 ORTHO05D007783 8.2e-55 218.0 285 52.3
BcaC05g24612 Brassica carinata HOM05D006579 ORTHO05D007783 1.4e-54 217.2 258 53.1
C05p01100 Brassica napus HOM05D006579 ORTHO05D007783 1.4e-54 217.2 258 53.1
Thhalv10008452m.g Eutrema salsugineum HOM05D006579 ORTHO05D007783 1.4e-54 217.2 258 53.9
Glyma.10G140000 Glycine max HOM05D006579 ORTHO05D007783 1.4e-54 217.2 258 55.0
MD17G1285900 Malus domestica HOM05D006579 ORTHO05D007783 1.4e-54 217.2 308 50.0
Peaxi162Scf00309g00059 Petunia axillaris HOM05D006579 ORTHO05D007783 1.4e-54 217.2 214 63.1
QL09p037462 Quercus lobata HOM05D006579 ORTHO05D007783 1.4e-54 217.2 270 52.2
MELO3C005183.2 Cucumis melo HOM05D006579 ORTHO05D007783 3.1e-54 216.1 304 50.3
Prupe.3G000500 Prunus persica HOM05D006579 ORTHO05D007783 3.1e-54 216.1 312 49.7
Sp1g01410 Schrenkiella parvula HOM05D006579 ORTHO05D007783 3.1e-54 216.1 259 52.9
BraA10t42384Z Brassica rapa HOM05D006579 ORTHO05D007783 4.1e-54 215.7 258 52.7
BolC5t28891H Brassica oleracea HOM05D006579 ORTHO05D007783 5.3e-54 215.3 258 52.7
AUR62037602 Chenopodium quinoa HOM05D006579 ORTHO05D007783 2.6e-53 213.0 279 52.0
Sed0009510 Sechium edule HOM05D006579 ORTHO05D007783 4.5e-53 212.2 296 50.3
AL1G11660 Arabidopsis lyrata HOM05D006579 ORTHO05D007783 7.7e-53 211.5 260 53.5
PSO210G5405 Papaver somniferum HOM05D006579 ORTHO05D007783 7.7e-53 211.5 256 53.5
Pp3c6_17910 Physcomitrium patens HOM05D006579 ORTHO05D007783 7.7e-53 211.5 281 50.5
AT1G02330 Arabidopsis thaliana HOM05D006579 ORTHO05D007783 1.0e-52 211.1 262 52.3
SHI19775 Sapria himalayana HOM05D006579 ORTHO05D007783 1.0e-52 211.1 283 53.0
PSO761G0510 Papaver somniferum HOM05D006579 ORTHO05D007783 2.9e-52 209.5 291 49.5
Lalb_Chr06g0167181 Lupinus albus HOM05D006579 ORTHO05D007783 3.8e-52 209.1 293 50.5
CSS0004948 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 5.0e-52 208.8 290 50.7
ClCG01G007260 Citrullus lanatus HOM05D006579 ORTHO05D007783 6.5e-52 208.4 305 49.2
CsaV3_5G018690 Cucumis sativus L. HOM05D006579 ORTHO05D007783 1.4e-51 207.2 303 47.9
FvH4_1g26040 Fragaria vesca HOM05D006579 ORTHO05D007783 2.5e-51 206.5 283 48.8
FAN19G0998 Fragaria x ananassa HOM05D006579 ORTHO05D007783 2.5e-51 206.5 283 48.8
FAN28G1483 Fragaria x ananassa HOM05D006579 ORTHO05D007783 9.4e-51 204.5 279 49.5
FAN23G1885 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.6e-50 203.8 283 48.8
FAN23G2819 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.6e-50 203.8 283 48.8
Os03g0374100 Oryza sativa ssp. japonica HOM05D006579 ORTHO05D007783 3.9e-49 199.1 282 47.2
Zm00001eb018120 Zea mays HOM05D006579 ORTHO05D007783 3.9e-49 199.1 282 48.2
Mapoly0012s0210 Marchantia polymorpha HOM05D006579 ORTHO05D007783 6.7e-49 198.4 290 49.0
Actinidia21333 Actinidia chinensis HOM05D006579 ORTHO05D007783 1.1e-48 197.6 227 56.8
FAN26G1368 Fragaria x ananassa HOM05D006579 ORTHO05D007783 2.0e-48 196.8 307 45.3
RcHm_v2.0_Chr3g0485501 Rosa chinensis HOM05D006579 ORTHO05D007783 2.6e-48 196.4 300 47.3
AagrBONN_evm.TU.Sc2ySwM_117.1030 Anthoceros agrestis HOM05D006579 ORTHO05D007783 3.7e-47 192.6 287 48.1
Pp3c5_5390 Physcomitrium patens HOM05D006579 ORTHO05D007783 1.1e-46 191.0 276 48.9
Hma1.2p1_1372F.1_g278650 Hydrangea macrophylla HOM05D006579 ORTHO05D007783 3.0e-41 172.9 182 59.3
HPP92_013492 Vanilla planifolia HOM05D006579 ORTHO05D007783 7.0e-38 161.8 175 57.1
CSS0018503 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 1.6e-37 160.6 175 57.7
Ah.01g015750 Amaranthus hybridus HOM05D006579 ORTHO05D007783 3.5e-37 159.5 404 35.6
Rhsim01G0001200 Rhododendron simsii HOM05D006579 ORTHO05D007783 7.7e-37 158.3 175 58.9
CBR_g3462 Chara braunii HOM05D006579 ORTHO05D007783 1.3e-36 157.5 214 47.7
Haze_05169 Corylus avellana HOM05D006579 ORTHO05D007783 3.4e-32 142.9 164 54.3
SMO367G0899 Selaginella moellendorffii HOM05D006579 ORTHO05D007783 7.0e-30 135.2 149 58.4
AUR62039016 Chenopodium quinoa HOM05D006579 ORTHO05D007783 1.1e-27 127.9 146 53.4
SEGI_10424 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 5.4e-22 109.0 151 48.3
Rhsim01G0001100 Rhododendron simsii HOM05D006579 ORTHO05D007783 1.0e-20 104.8 115 58.3
vmacro02350 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 5.0e-20 102.4 134 54.5
HanXRQChr09g0263751 Helianthus annuus HOM05D006579 ORTHO05D007783 8.6e-20 101.7 183 43.7
Lju2566A1G36 Lonicera japonica HOM05D006579 ORTHO05D007783 9.5e-19 98.2 159 46.5
vmacro02349 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 9.5e-19 98.2 112 56.2
COL.COLO4_00282 Corchorus olitorius HOM05D006579 ORTHO05D007783 5.2e-17 92.4 110 52.7
SEGI_25815 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 6.8e-17 92.0 125 50.4
Cc00_g21250 Coffea canephora HOM05D006579 ORTHO05D007783 5.4e-14 82.4 54 74.1
MCO04G420 Micromonas commoda HOM05D006579 ORTHO05D007783 3.0e-12 76.6 224 34.4
Lju2566A1T42 Lonicera japonica HOM05D006579 ORTHO05D007783 2.1e-10 70.5 111 47.7
Lju2566A1T41 Lonicera japonica HOM05D006579 ORTHO05D007783 8.9e-09 65.1 43 72.1


User provided reference genes

Program Settings