Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21502 Utricularia gibba HOM05D004728 ORTHO05D002375 5.6e-105 384.4 214 100.0
unitig_0.g2111 Utricularia gibba HOM05D004728 ORTHO05D002375 2.9e-53 212.6 240 60.0
Migut.C01097 Erythranthe guttata HOM05D004728 ORTHO05D002375 2.4e-23 113.2 122 63.9
MSTRG.1388 Avicennia marina HOM05D004728 ORTHO05D002375 3.3e-20 102.8 221 44.8
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 6.2e-19 98.6 129 51.9
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 8.1e-19 98.2 133 52.6
MSTRG.1387 Avicennia marina HOM05D004728 ORTHO05D002375 3.4e-17 92.8 127 53.5
Cfa017899 Carpinus fangiana HOM05D004728 ORTHO05D002375 3.4e-17 92.8 137 52.6
Haze_18251 Corylus avellana HOM05D004728 ORTHO05D002375 1.7e-16 90.5 137 51.8
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 3.2e-15 86.3 119 53.8
Oeu045992.1 Olea europaea HOM05D004728 ORTHO05D002375 4.1e-15 85.9 133 48.9
DCAR_012878 Daucus carota HOM05D004728 ORTHO05D002375 1.6e-14 84.0 122 53.3
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 2.1e-14 83.6 107 59.8
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 4.6e-14 82.4 145 43.4
Oeu000784.1 Olea europaea HOM05D004728 ORTHO05D002375 1.3e-13 80.9 111 59.5
Eucgr.I02631 Eucalyptus grandis HOM05D007310 ORTHO05D002375 1.7e-13 80.5 136 44.1
Migut.C01161 Erythranthe guttata HOM05D004728 ORTHO05D002375 2.3e-13 80.1 136 52.2
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 8.6e-13 78.2 119 48.7
Migut.C01096 Erythranthe guttata HOM05D004728 ORTHO05D002375 1.1e-12 77.8 131 46.6
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 1.5e-12 77.4 125 51.2
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 1.5e-12 77.4 132 45.5
Lsat_1_v5_gn_9_73441 Lactuca sativa HOM05D004728 ORTHO05D002375 1.5e-12 77.4 148 33.8
SalBow7G1327 Salvia bowleyana HOM05D004728 ORTHO05D002375 1.9e-12 77.0 132 42.4
Gorai.009G233300 Gossypium raimondii HOM05D004728 ORTHO05D002375 2.5e-12 76.6 128 45.3
DCAR_012879 Daucus carota HOM05D004728 ORTHO05D002375 4.3e-12 75.9 132 50.8
CiPaw.15G045000 Carya illinoinensis HOM05D004728 ORTHO05D002375 5.6e-12 75.5 120 44.2
Gohir.A05G223100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 5.6e-12 75.5 128 45.3
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 9.6e-12 74.7 120 50.0
Hund26995 Selenicereus undatus HOM05D004728 ORTHO05D002375 9.6e-12 74.7 129 48.1
CiPaw.15G045100 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.2e-11 74.3 120 43.3
Gohir.D05G225800 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.2e-11 74.3 129 40.3
Thecc.08G100900 Theobroma cacao HOM05D004728 ORTHO05D002375 1.2e-11 74.3 131 43.5
ECA247G2878 Erigeron canadensis HOM05D004728 ORTHO05D002375 1.6e-11 73.9 123 49.6
HanXRQChr17g0556311 Helianthus annuus HOM05D004728 ORTHO05D002375 2.1e-11 73.6 123 47.2
Gorai.009G233200 Gossypium raimondii HOM05D004728 ORTHO05D002375 2.8e-11 73.2 159 42.8
GSVIVG01009093001 Vitis vinifera HOM05D004728 ORTHO05D002375 3.6e-11 72.8 121 50.4
CiPaw.16G032400 Carya illinoinensis HOM05D004728 ORTHO05D002375 4.7e-11 72.4 121 47.1
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 4.7e-11 72.4 186 38.7
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 6.2e-11 72.0 186 38.2
HanXRQChr09g0250741 Helianthus annuus HOM05D004728 ORTHO05D002375 6.2e-11 72.0 135 37.0
Lj4A728T44 Lonicera japonica HOM05D004728 ORTHO05D002375 8.1e-11 71.6 114 53.5
Rhsim06G0077100 Rhododendron simsii HOM05D004728 ORTHO05D002375 8.1e-11 71.6 118 50.8
Actinidia33119 Actinidia chinensis HOM05D004728 ORTHO05D002375 2.4e-10 70.1 156 44.2
Peaxi162Scf01184g00014 Petunia axillaris HOM05D004728 ORTHO05D002375 2.4e-10 70.1 139 46.8
CANSAT01G0157 Cannabis sativa HOM05D004728 ORTHO05D002375 4.0e-10 69.3 114 46.5
ECA247G1585 Erigeron canadensis HOM05D004728 ORTHO05D002375 4.0e-10 69.3 155 27.7
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 4.0e-10 69.3 124 46.8
Sc01g0000880 Simmondsia chinensis HOM05D004728 ORTHO05D002375 4.0e-10 69.3 111 48.6
MSTRG.25340 Avicennia marina HOM05D004728 ORTHO05D002375 5.2e-10 68.9 120 45.8
ECA247G3235 Erigeron canadensis HOM05D004728 ORTHO05D002375 5.2e-10 68.9 128 43.8
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 6.9e-10 68.6 128 46.1
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 6.9e-10 68.6 108 49.1
Cfa005685 Carpinus fangiana HOM05D007310 ORTHO05D002375 8.9e-10 68.2 125 44.8
Cpa.g.sc42.21 Carica papaya HOM05D007310 ORTHO05D002375 1.2e-09 67.8 134 44.8
Lsat_1_v5_gn_1_2940 Lactuca sativa HOM05D004728 ORTHO05D002375 1.2e-09 67.8 172 34.3
MD08G1189800 Malus domestica HOM05D004728 ORTHO05D002375 1.2e-09 67.8 124 45.2
MSTRG.1389 Avicennia marina HOM05D004728 ORTHO05D002375 2.0e-09 67.0 122 46.7
Haze_10565 Corylus avellana HOM05D007310 ORTHO05D002375 2.6e-09 66.6 124 46.0
Hma1.2p1_1180F.1_g264660 Hydrangea macrophylla HOM05D004728 ORTHO05D002375 2.6e-09 66.6 106 55.7
Actinidia10350 Actinidia chinensis HOM05D004728 ORTHO05D002375 7.6e-09 65.1 124 46.8
FvH4_1g20180 Fragaria vesca HOM05D004728 ORTHO05D002375 7.6e-09 65.1 128 46.1
AUR62012905 Chenopodium quinoa HOM05D007310 ORTHO05D002375 9.9e-09 64.7 131 41.2
DCAR_003461 Daucus carota HOM05D004728 ORTHO05D002375 9.9e-09 64.7 109 35.8
MD15G1377600 Malus domestica HOM05D004728 ORTHO05D002375 9.9e-09 64.7 124 44.4
EL10Ac1g01137 Beta vulgaris HOM05D004728 ORTHO05D002375 1.3e-08 64.3 140 33.6
Gohir.A02G076900 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.7e-08 63.9 123 48.0
Gorai.005G094700 Gossypium raimondii HOM05D004728 ORTHO05D002375 1.7e-08 63.9 122 48.4
HanXRQChr17g0556321 Helianthus annuus HOM05D004728 ORTHO05D002375 1.7e-08 63.9 118 29.7
HanXRQChr17g0556301 Helianthus annuus HOM05D037404 ORTHO05D035140 2.2e-08 63.5 125 42.4
AUR62027821 Chenopodium quinoa HOM05D059013 ORTHO05D002375 2.9e-08 63.2 118 33.1
Duzib116G0314 Durio zibethinus HOM05D004728 ORTHO05D002375 2.9e-08 63.2 142 40.1
MD05G1054900 Malus domestica HOM05D007310 ORTHO05D002375 2.9e-08 63.2 103 48.5
Actinidia28038 Actinidia chinensis HOM05D007310 ORTHO05D002375 3.8e-08 62.8 112 45.5
COL.COLO4_11993 Corchorus olitorius HOM05D004728 ORTHO05D002375 3.8e-08 62.8 126 45.2
Dinv24166 Davidia involucrata HOM05D007310 ORTHO05D002375 3.8e-08 62.8 117 45.3
ECA247G0078 Erigeron canadensis HOM05D004728 ORTHO05D002375 3.8e-08 62.8 102 52.0
Rhsim05G0103200 Rhododendron simsii HOM05D007310 ORTHO05D002375 3.8e-08 62.8 112 42.9
PSO675G6306 Papaver somniferum HOM05D004728 ORTHO05D002375 4.9e-08 62.4 162 42.0
PSO761G0559 Papaver somniferum HOM05D015253 ORTHO05D002375 4.9e-08 62.4 115 33.9
RcHm_v2.0_Chr2g0112251 Rosa chinensis HOM05D004728 ORTHO05D002375 4.9e-08 62.4 126 44.4
AUR62011722 Chenopodium quinoa HOM05D007310 ORTHO05D002375 6.4e-08 62.0 131 38.9
HanXRQChr05g0149651 Helianthus annuus HOM05D004728 ORTHO05D002375 6.4e-08 62.0 136 39.7
Solyc04g074770.2 Solanum lycopersicum HOM05D012586 ORTHO05D012196 6.4e-08 62.0 124 46.0
Actinidia29600 Actinidia chinensis HOM05D004728 ORTHO05D002375 8.4e-08 61.6 169 40.8
HanXRQChr17g0561041 Helianthus annuus HOM05D004728 ORTHO05D002375 8.4e-08 61.6 123 27.6
Nitab4.5_0006625g0010 Nicotiana tabacum HOM05D007310 ORTHO05D002375 8.4e-08 61.6 130 37.7
Hund14099 Selenicereus undatus HOM05D004728 ORTHO05D002375 8.4e-08 61.6 130 43.1
SGA_v2.0_scaffold14G07142 Striga asiatica HOM05D007310 ORTHO05D002375 8.4e-08 61.6 114 31.6
Lsat_1_v5_gn_1_2840 Lactuca sativa HOM05D004728 ORTHO05D002375 1.1e-07 61.2 124 44.4
MD15G1317700 Malus domestica HOM05D004728 ORTHO05D002375 1.1e-07 61.2 125 43.2
Migut.B00577 Erythranthe guttata HOM05D007310 ORTHO05D002375 1.4e-07 60.8 132 30.3
PGSC0003DMG400030842 Solanum tuberosum HOM05D012586 ORTHO05D012196 1.4e-07 60.8 124 46.0
Lsat_1_v5_gn_1_2800 Lactuca sativa HOM05D037404 ORTHO05D035140 1.9e-07 60.5 107 32.7
Glyma.13G042400 Glycine max HOM05D007310 ORTHO05D002375 2.4e-07 60.1 113 49.6
Gohir.D02G084100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 3.2e-07 59.7 113 48.7
Lsat_1_v5_gn_1_2860 Lactuca sativa HOM05D004728 ORTHO05D002375 3.2e-07 59.7 120 48.3
Prupe.8G066300 Prunus persica HOM05D007310 ORTHO05D002375 3.2e-07 59.7 96 49.0
RcHm_v2.0_Chr2g0112261 Rosa chinensis HOM05D004728 ORTHO05D002375 3.2e-07 59.7 117 43.6
COL.COLO4_32323 Corchorus olitorius HOM05D007310 ORTHO05D002375 4.2e-07 59.3 176 34.7
Lsat_1_v5_gn_9_73501 Lactuca sativa HOM05D004728 ORTHO05D002375 4.2e-07 59.3 148 41.2
SalBow8G1210 Salvia bowleyana HOM05D007310 ORTHO05D002375 4.2e-07 59.3 113 29.2
PGSC0003DMG400030843 Solanum tuberosum HOM05D021150 ORTHO05D002375 4.2e-07 59.3 119 48.7
Lsat_1_v5_gn_9_73380 Lactuca sativa HOM05D004728 ORTHO05D002375 7.1e-07 58.5 148 40.5
QL02p002250 Quercus lobata HOM05D004728 ORTHO05D002375 7.1e-07 58.5 94 55.3
SGA_v2.0_scaffold24G10482 Striga asiatica HOM05D004728 ORTHO05D002375 7.1e-07 58.5 127 44.1
Thecc.02G133200 Theobroma cacao HOM05D007310 ORTHO05D002375 7.1e-07 58.5 152 38.2
Carub.0003s2834 Capsella rubella HOM05D007310 ORTHO05D002375 9.3e-07 58.2 136 27.2
MELO3C011050.2 Cucumis melo HOM05D039494 ORTHO05D002375 9.3e-07 58.2 109 33.9
Nitab4.5_0003374g0020 Nicotiana tabacum HOM05D012586 ORTHO05D012196 9.3e-07 58.2 119 44.5
Potri.017G050000 Populus trichocarpa HOM05D007310 ORTHO05D002375 9.3e-07 58.2 137 45.3
QL02p002263 Quercus lobata HOM05D004728 ORTHO05D002375 9.3e-07 58.2 89 53.9
CiPaw.06G156100 Carya illinoinensis HOM05D007310 ORTHO05D002375 1.2e-06 57.8 106 50.0
ECA232G3092 Erigeron canadensis HOM05D004728 ORTHO05D045252 1.2e-06 57.8 108 41.7
Potri.001G310100 Populus trichocarpa HOM05D007310 ORTHO05D002375 1.2e-06 57.8 127 44.1
Sabra16G0196000 Salix brachista HOM05D007310 ORTHO05D002375 1.2e-06 57.8 109 47.7
CSS0038738 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 1.6e-06 57.4 51 54.9
CSS0048480 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 1.6e-06 57.4 51 54.9
Duzib041G0412 Durio zibethinus HOM05D004728 ORTHO05D002375 1.6e-06 57.4 110 48.2
Solyc04g074780.4 Solanum lycopersicum HOM05D021150 ORTHO05D002375 1.6e-06 57.4 131 46.6
CiPaw.05G032100 Carya illinoinensis HOM05D007310 ORTHO05D002375 2.1e-06 57.0 119 45.4
Peaxi162Scf00299g00914 Petunia axillaris HOM05D007310 ORTHO05D002375 2.1e-06 57.0 132 33.3
SGA_v2.0_scaffold52G18993 Striga asiatica HOM05D004728 ORTHO05D002375 2.1e-06 57.0 143 42.7
Duzib248G0762 Durio zibethinus HOM05D007310 ORTHO05D002375 2.7e-06 56.6 116 44.8
Lsat_1_v5_gn_1_2980 Lactuca sativa HOM05D004728 ORTHO05D002375 2.7e-06 56.6 109 44.0
Lj4A95G12 Lonicera japonica HOM05D004728 ORTHO05D002375 2.7e-06 56.6 109 42.2
MBI06_g03314_MAGBIO Magnolia biondii HOM05D007310 ORTHO05D002375 2.7e-06 56.6 111 44.1
PGSC0003DMG400012536 Solanum tuberosum HOM05D007310 ORTHO05D002375 2.7e-06 56.6 151 27.2
Cc02_g21140 Coffea canephora HOM05D007310 ORTHO05D002375 3.5e-06 56.2 119 42.0
DCAR_021882 Daucus carota HOM05D007310 ORTHO05D002375 3.5e-06 56.2 103 43.7
FvH4_1g20190 Fragaria vesca HOM05D004728 ORTHO05D002375 3.5e-06 56.2 128 42.2
FAN19G1373 Fragaria x ananassa HOM05D004728 ORTHO05D002375 3.5e-06 56.2 128 42.2
Hma1.2p1_0784F.1_g217300 Hydrangea macrophylla HOM05D007310 ORTHO05D002375 3.5e-06 56.2 97 47.4
SGA_v2.0_scaffold115G32157 Striga asiatica HOM05D004728 ORTHO05D002375 3.5e-06 56.2 128 43.0
VMungo0251G1327 Vigna mungo HOM05D007310 ORTHO05D002375 4.6e-06 55.8 113 46.9
Lj2A538G23 Lonicera japonica HOM05D004728 ORTHO05D002375 6.0e-06 55.5 95 32.6
MSTRG.1471 Avicennia marina HOM05D004728 ORTHO05D002375 7.8e-06 55.1 106 49.1
SGA_v2.0_scaffold48G17928 Striga asiatica HOM05D004728 ORTHO05D002375 7.8e-06 55.1 116 44.0
TAR376G0192 Trochodendron aralioides HOM05D004728 ORTHO05D002375 7.8e-06 55.1 54 50.0


User provided reference genes

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