Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21488 Utricularia gibba HOM05D003443 ORTHO05D008640 5.4e-66 254.2 132 100.0
SGA_v2.0_scaffold52G18981 Striga asiatica HOM05D003443 ORTHO05D008640 3.0e-32 142.1 119 63.0
SalBow7G4791 Salvia bowleyana HOM05D003443 ORTHO05D008640 2.4e-29 132.5 120 56.7
Migut.C01148 Erythranthe guttata HOM05D003443 ORTHO05D008640 2.0e-28 129.4 119 55.5
SalBow7G2413 Salvia bowleyana HOM05D003443 ORTHO05D008640 2.0e-28 129.4 121 57.0
MSTRG.1460 Avicennia marina HOM05D003443 ORTHO05D008640 1.3e-27 126.7 120 56.7
FAN15G0021 Fragaria x ananassa HOM05D003443 ORTHO05D008640 9.4e-26 120.6 121 53.7
FAN24G2127 Fragaria x ananassa HOM05D003443 ORTHO05D008640 4.7e-25 118.2 121 52.9
FAN27G2419 Fragaria x ananassa HOM05D003443 ORTHO05D008640 6.1e-25 117.9 121 52.1
FvH4_2g26530 Fragaria vesca HOM05D003443 ORTHO05D008640 8.8e-24 114.0 121 52.1
Thecc.08G121300 Theobroma cacao HOM05D003443 ORTHO05D008640 3.3e-23 112.1 129 52.7
DCAR_014106 Daucus carota HOM05D003443 ORTHO05D008640 5.7e-23 111.3 131 47.3
AT4G08240 Arabidopsis thaliana HOM05D003443 ORTHO05D008640 7.4e-23 110.9 123 49.6
Medtr5g058660 Medicago truncatula HOM05D003443 ORTHO05D008640 1.3e-22 110.2 121 49.6
Medtr5g059030 Medicago truncatula HOM05D003443 ORTHO05D008640 1.3e-22 110.2 121 49.6
MD03G1200300 Malus domestica HOM05D003443 ORTHO05D008640 1.7e-22 109.8 120 52.5
Nitab4.5_0002883g0010 Nicotiana tabacum HOM05D003443 ORTHO05D008640 1.7e-22 109.8 134 51.5
RcHm_v2.0_Chr6g0295401 Rosa chinensis HOM05D003443 ORTHO05D008640 2.2e-22 109.4 121 49.6
Nn4g26023 Nelumbo nucifera HOM05D003443 ORTHO05D008640 2.8e-22 109.0 124 50.0
Prupe.1G501600 Prunus persica HOM05D003443 ORTHO05D008640 3.7e-22 108.6 122 52.5
THA.LOC104817138 Tarenaya hassleriana HOM05D003443 ORTHO05D008640 3.7e-22 108.6 122 48.4
Actinidia23064 Actinidia chinensis HOM05D003443 ORTHO05D008640 4.8e-22 108.2 130 50.8
MD15G1353300 Malus domestica HOM05D003443 ORTHO05D008640 4.8e-22 108.2 120 51.7
Nitab4.5_0001926g0050 Nicotiana tabacum HOM05D003443 ORTHO05D008640 1.8e-21 106.3 134 48.5
Carub.0006s2677 Capsella rubella HOM05D003443 ORTHO05D008640 2.4e-21 105.9 123 50.4
CAN.G513.1 Capsicum annuum HOM05D003443 ORTHO05D008640 3.1e-21 105.5 121 52.1
Solyc11g013020.2 Solanum lycopersicum HOM05D003443 ORTHO05D008640 3.1e-21 105.5 123 50.4
PGSC0003DMG400000906 Solanum tuberosum HOM05D003443 ORTHO05D008640 3.1e-21 105.5 123 50.4
AL6G41970 Arabidopsis lyrata HOM05D003443 ORTHO05D008640 4.1e-21 105.1 123 48.8
CSS0034050 Camellia sinensis var. sinensis HOM05D003443 ORTHO05D008640 4.1e-21 105.1 136 47.8
Ciclev10002759m.g Citrus clementina HOM05D003443 ORTHO05D008640 4.1e-21 105.1 128 50.0
Sopen11g007760 Solanum pennellii HOM05D003443 ORTHO05D008640 4.1e-21 105.1 124 50.8
Atru.chr13.1408 Acer truncatum HOM05D003443 ORTHO05D008640 6.9e-21 104.4 127 48.0
Glyma.14G162600 Glycine max HOM05D003443 ORTHO05D008640 6.9e-21 104.4 125 46.4
CiPaw.05G224500 Carya illinoinensis HOM05D003443 ORTHO05D008640 9.1e-21 104.0 129 50.4
PSO170G0931 Papaver somniferum HOM05D003443 ORTHO05D008640 9.1e-21 104.0 126 50.8
VMungo0647G0179 Vigna mungo HOM05D003443 ORTHO05D008640 9.1e-21 104.0 123 48.0
Aa31LG9G14320 Aethionema arabicum HOM05D003443 ORTHO05D008640 1.2e-20 103.6 132 47.0
Dinv40389 Davidia involucrata HOM05D003443 ORTHO05D008640 1.2e-20 103.6 147 43.5
Psat2g087720 Pisum sativum HOM05D003443 ORTHO05D008640 1.2e-20 103.6 128 46.1
Gorai.009G244100 Gossypium raimondii HOM05D003443 ORTHO05D008640 1.5e-20 103.2 128 50.8
Actinidia02607 Actinidia chinensis HOM05D003443 ORTHO05D008640 2.0e-20 102.8 134 47.0
MBI15_g35999_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 2.0e-20 102.8 129 46.5
Ca_26970_v3 Cicer arietinum L. HOM05D003443 ORTHO05D008640 2.6e-20 102.4 128 47.7
MBI06_g44272_MAGBIO Magnolia biondii HOM05D003443 ORTHO05D008640 2.6e-20 102.4 129 46.5
Cc10_g11000 Coffea canephora HOM05D003443 ORTHO05D008640 3.4e-20 102.1 121 49.6
CANSAT25G1680 Cannabis sativa HOM05D003443 ORTHO05D008640 4.5e-20 101.7 126 46.8
Gohir.A05G233400 Gossypium hirsutum HOM05D003443 ORTHO05D008640 4.5e-20 101.7 128 47.7
Gohir.D05G235800 Gossypium hirsutum HOM05D003443 ORTHO05D008640 4.5e-20 101.7 128 50.0
Cpa.g.sc70.11 Carica papaya HOM05D003443 ORTHO05D008640 5.9e-20 101.3 123 51.2
Haze_00480 Corylus avellana HOM05D003443 ORTHO05D008640 5.9e-20 101.3 129 46.5
Lalb_Chr10g0101911 Lupinus albus HOM05D003443 ORTHO05D008640 7.7e-20 100.9 122 46.7
GSVIVG01008902001 Vitis vinifera HOM05D003443 ORTHO05D008640 7.7e-20 100.9 125 44.8
QL08p024382 Quercus lobata HOM05D003443 ORTHO05D008640 1.0e-19 100.5 127 49.6
Sc01g0001350 Simmondsia chinensis HOM05D003443 ORTHO05D008640 1.0e-19 100.5 127 44.1
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 1.7e-19 99.8 129 48.1
ATR0121G005 Amborella trichopoda HOM05D003443 ORTHO05D008640 5.0e-19 98.2 136 43.4
Hma1.2p1_0073F.1_g038390 Hydrangea macrophylla HOM05D003443 ORTHO05D008640 5.0e-19 98.2 122 49.2
Manes.18G075200 Manihot esculenta HOM05D003443 ORTHO05D008640 5.0e-19 98.2 133 47.4
Sabra02G0067600 Salix brachista HOM05D003443 ORTHO05D008640 5.0e-19 98.2 128 47.7
Sp6g09810 Schrenkiella parvula HOM05D003443 ORTHO05D008640 6.5e-19 97.8 125 45.6
arahy.Tifrunner.gnm1.ann1.ZIXY5S Arachis hypogaea HOM05D003443 ORTHO05D008640 1.4e-18 96.7 131 42.7
Thhalv10029053m.g Eutrema salsugineum HOM05D003443 ORTHO05D008640 1.9e-18 96.3 123 47.2
Lj1g0013808 Lotus japonicus HOM05D003443 ORTHO05D008640 1.9e-18 96.3 131 44.3
Peaxi162Scf00395g00717 Petunia axillaris HOM05D003443 ORTHO05D008640 1.9e-18 96.3 131 42.7
Potri.002G086200 Populus trichocarpa HOM05D003443 ORTHO05D008640 1.9e-18 96.3 130 45.4
ECA232G0443 Erigeron canadensis HOM05D003443 ORTHO05D008640 2.5e-18 95.9 138 47.8
Peaxi162Scf00198g00098 Petunia axillaris HOM05D003443 ORTHO05D008640 3.2e-18 95.5 131 42.7
arahy.Tifrunner.gnm1.ann1.B00VWE Arachis hypogaea HOM05D003443 ORTHO05D008640 5.5e-18 94.7 131 43.5
AUR62004720 Chenopodium quinoa HOM05D003443 ORTHO05D008640 7.2e-18 94.4 143 41.3
BcaB01g02870 Brassica carinata HOM05D003443 ORTHO05D008640 9.4e-18 94.0 121 43.8
CARHR259340 Cardamine hirsuta HOM05D003443 ORTHO05D008640 9.4e-18 94.0 123 46.3
Rhsim06G0105400 Rhododendron simsii HOM05D003443 ORTHO05D008640 9.4e-18 94.0 137 44.5
Sed0028054 Sechium edule HOM05D003443 ORTHO05D008640 4.7e-17 91.7 135 40.0
BcaC01g04776 Brassica carinata HOM05D003443 ORTHO05D008640 6.1e-17 91.3 122 43.4
C03p33840 Brassica napus HOM05D003443 ORTHO05D008640 6.1e-17 91.3 122 43.4
BolC3t15700H Brassica oleracea HOM05D003443 ORTHO05D008640 6.1e-17 91.3 122 43.4
BraA03t12014Z Brassica rapa HOM05D003443 ORTHO05D008640 6.1e-17 91.3 121 43.8
vmacro12548 Vaccinium macrocarpon HOM05D003443 ORTHO05D008640 1.0e-16 90.5 138 43.5
A03p27990 Brassica napus HOM05D003443 ORTHO05D008640 1.4e-16 90.1 122 42.6
MD08G1167900 Malus domestica HOM05D003443 ORTHO05D008640 2.3e-16 89.4 129 45.7
HPP92_002301 Vanilla planifolia HOM05D003443 ORTHO05D008640 6.7e-16 87.8 122 41.0
Aqoxy6G00163 Aquilegia oxysepala HOM05D003443 ORTHO05D008640 1.1e-15 87.0 129 41.9
CsaV3_6G003590 Cucumis sativus L. HOM05D003443 ORTHO05D008640 2.0e-15 86.3 133 37.6
HanXRQChr09g0254131 Helianthus annuus HOM05D003443 ORTHO05D008640 2.0e-15 86.3 113 44.2
MELO3C011587.2 Cucumis melo HOM05D003443 ORTHO05D008640 2.6e-15 85.9 141 37.6
Oeu047933.1 Olea europaea HOM05D003443 ORTHO05D008640 1.7e-14 83.2 134 37.3
Lsat_1_v5_gn_4_136221 Lactuca sativa HOM05D003443 ORTHO05D008640 4.1e-13 78.6 128 39.1
CDE08G0113 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 7.0e-13 77.8 109 45.0
MELO3C011304.2 Cucumis melo HOM05D003443 ORTHO05D008640 7.0e-13 77.8 145 35.2
Zm00001eb244530 Zea mays HOM05D003443 ORTHO05D008640 9.1e-13 77.4 114 40.4
AUR62023639 Chenopodium quinoa HOM05D003443 ORTHO05D008640 3.5e-12 75.5 120 38.3
Ah.16g110170 Amaranthus hybridus HOM05D003443 ORTHO05D008640 5.9e-12 74.7 68 48.5
Migut.G00969 Erythranthe guttata HOM05D003443 ORTHO05D008640 5.9e-12 74.7 119 42.9
TAR628G1666 Trochodendron aralioides HOM05D003443 ORTHO05D008640 5.9e-12 74.7 82 51.2
TPR.G8499 Trifolium pratense HOM05D028375 ORTHO05D008640 2.2e-11 72.8 128 35.9
Eucgr.L01689 Eucalyptus grandis HOM05D003443 ORTHO05D008640 2.9e-11 72.4 68 52.9
SEGI_04119 Sequoiadendron giganteum HOM05D003443 ORTHO05D008640 2.9e-11 72.4 113 39.8
CDE06G0537 Ceratophyllum demersum HOM05D003443 ORTHO05D008640 3.8e-11 72.0 109 38.5
Phvul.008G165400 Phaseolus vulgaris HOM05D003443 ORTHO05D008640 5.0e-11 71.6 122 40.2
Os02g0567000 Oryza sativa ssp. japonica HOM05D003443 ORTHO05D008640 8.5e-11 70.9 123 37.4
TWI12G0841 Tripterygium wilfordii HOM05D003443 ORTHO05D008640 8.5e-11 70.9 68 54.4
Hund27039 Selenicereus undatus HOM05D003443 ORTHO05D008640 1.2e-09 67.0 68 44.1
Mapoly0161s0025 Marchantia polymorpha HOM05D003443 ORTHO05D008640 2.1e-09 66.2 118 33.1
Duzib093G0610 Durio zibethinus HOM05D003443 ORTHO05D008640 3.6e-09 65.5 120 37.5
PGR044G0044 Punica granatum HOM05D003443 ORTHO05D008640 1.0e-08 63.9 140 35.0
ClCG08G005410 Citrullus lanatus HOM05D003443 ORTHO05D008640 6.7e-08 61.2 69 40.6


User provided reference genes

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