Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21446 Utricularia gibba HOM05D007512 ORTHO05D009524 3.5e-103 378.3 185 100.0
Nn7g38060 Nelumbo nucifera HOM05D007512 ORTHO05D009524 2.2e-57 226.1 183 56.3
Haze_01852 Corylus avellana HOM05D007512 ORTHO05D009524 6.5e-57 224.6 187 55.6
Nn7g38052 Nelumbo nucifera HOM05D007512 ORTHO05D009524 6.5e-57 224.6 183 55.7
CAN.G946.8 Capsicum annuum HOM05D007512 ORTHO05D009524 1.4e-56 223.4 179 55.9
Nitab4.5_0007814g0010 Nicotiana tabacum HOM05D007512 ORTHO05D009524 1.4e-56 223.4 178 53.9
Peaxi162Scf00359g00113 Petunia axillaris HOM05D007512 ORTHO05D009524 2.5e-56 222.6 180 55.0
MBI18_g45404_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 4.2e-56 221.9 179 54.7
SGA_v2.0_scaffold45G17047 Striga asiatica HOM05D007512 ORTHO05D009524 4.2e-56 221.9 184 59.2
Cfa005459 Carpinus fangiana HOM05D007512 ORTHO05D009524 7.1e-56 221.1 194 53.6
PGSC0003DMG400045865 Solanum tuberosum HOM05D007512 ORTHO05D009524 2.3e-54 216.1 182 54.9
PGSC0003DMG402000923 Solanum tuberosum HOM05D007512 ORTHO05D009524 2.3e-54 216.1 182 54.9
Solyc07g044970.1 Solanum lycopersicum HOM05D007512 ORTHO05D009524 3.9e-54 215.3 182 54.9
Nitab4.5_0001552g0120 Nicotiana tabacum HOM05D007512 ORTHO05D009524 5.1e-54 214.9 182 53.3
QL08p045474 Quercus lobata HOM05D007512 ORTHO05D009524 1.1e-53 213.8 184 54.9
Migut.J01325 Erythranthe guttata HOM05D007512 ORTHO05D009524 1.5e-53 213.4 182 54.9
CiPaw.09G218400 Carya illinoinensis HOM05D007512 ORTHO05D009524 2.5e-53 212.6 182 52.7
Sopen07g023500 Solanum pennellii HOM05D007512 ORTHO05D009524 3.3e-53 212.2 182 54.4
Lj1C588G3 Lonicera japonica HOM05D007512 ORTHO05D009524 7.4e-53 211.1 186 52.2
Oeu021245.2 Olea europaea HOM05D007512 ORTHO05D009524 1.6e-52 209.9 181 53.6
RcHm_v2.0_Chr2g0152451 Rosa chinensis HOM05D007512 ORTHO05D009524 2.1e-52 209.5 184 52.7
TAR626G1484 Trochodendron aralioides HOM05D007512 ORTHO05D009524 6.3e-52 208.0 185 51.4
Ciclev10032522m.g Citrus clementina HOM05D007512 ORTHO05D009524 1.8e-51 206.5 198 48.5
CSS0030250 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 4.1e-51 205.3 178 55.6
Sabra02G0045700 Salix brachista HOM05D007512 ORTHO05D009524 4.1e-51 205.3 178 52.8
FvH4_6g38852 Fragaria vesca HOM05D007512 ORTHO05D009524 6.9e-51 204.5 180 53.9
Glyma.02G283200 Glycine max HOM05D007512 ORTHO05D009524 2.0e-50 203.0 180 51.1
Potri.002G056400 Populus trichocarpa HOM05D007512 ORTHO05D009524 3.4e-50 202.2 178 52.2
Zm00001eb300410 Zea mays HOM05D007512 ORTHO05D009524 3.4e-50 202.2 187 53.5
Cpa.g.sc53.33 Carica papaya HOM05D007512 ORTHO05D009524 7.6e-50 201.1 185 49.2
Os07g0160300 Oryza sativa ssp. japonica HOM05D007512 ORTHO05D009524 1.3e-49 200.3 183 53.6
GSVIVG01020824001 Vitis vinifera HOM05D007512 ORTHO05D009524 1.3e-49 200.3 183 50.8
MBI18_g43440_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 2.2e-49 199.5 179 52.5
ClCG11G016580 Citrullus lanatus HOM05D007512 ORTHO05D009524 2.9e-49 199.1 182 52.7
TWI14G0908 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 2.9e-49 199.1 185 49.2
MELO3C022965.2 Cucumis melo HOM05D007512 ORTHO05D009524 6.5e-49 198.0 182 52.2
CsaV3_4G032050 Cucumis sativus L. HOM05D007512 ORTHO05D009524 6.5e-49 198.0 182 51.6
Gohir.A11G061700 Gossypium hirsutum HOM05D007512 ORTHO05D009524 6.5e-49 198.0 179 50.8
Gorai.007G071100 Gossypium raimondii HOM05D007512 ORTHO05D009524 8.5e-49 197.6 179 50.8
Rhsim12G0013200 Rhododendron simsii HOM05D007512 ORTHO05D009524 1.1e-48 197.2 178 53.4
Ca_06252_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 1.9e-48 196.4 180 52.2
Sc23g0003420 Simmondsia chinensis HOM05D007512 ORTHO05D009524 1.9e-48 196.4 181 51.4
VMungo0647G1345 Vigna mungo HOM05D007512 ORTHO05D009524 2.5e-48 196.1 180 50.6
Psat2g017680 Pisum sativum HOM05D007512 ORTHO05D009524 3.2e-48 195.7 180 51.7
Prupe.3G178900 Prunus persica HOM05D007512 ORTHO05D009524 3.2e-48 195.7 182 47.3
LjContig00049g0018887 Lotus japonicus HOM05D007512 ORTHO05D009524 4.2e-48 195.3 179 49.2
Phvul.008G196000 Phaseolus vulgaris HOM05D007512 ORTHO05D009524 4.2e-48 195.3 180 51.1
HanXRQChr05g0157121 Helianthus annuus HOM05D007512 ORTHO05D009524 5.5e-48 194.9 166 53.0
Duzib147G0049 Durio zibethinus HOM05D007512 ORTHO05D009524 7.2e-48 194.5 179 49.7
ECA246G3016 Erigeron canadensis HOM05D007512 ORTHO05D009524 9.3e-48 194.1 181 50.8
Eucgr.A02034 Eucalyptus grandis HOM05D007512 ORTHO05D009524 9.3e-48 194.1 161 55.9
Gohir.D11G065833 Gossypium hirsutum HOM05D007512 ORTHO05D009524 2.7e-47 192.6 161 54.0
Manes.12G132100 Manihot esculenta HOM05D007512 ORTHO05D009524 2.7e-47 192.6 182 46.7
Aqoxy1G01494 Aquilegia oxysepala HOM05D007512 ORTHO05D009524 1.0e-46 190.7 181 49.2
Gohir.D11G065600 Gossypium hirsutum HOM05D007512 ORTHO05D009524 1.0e-46 190.7 179 49.7
Thecc.01G167000 Theobroma cacao HOM05D007512 ORTHO05D009524 1.8e-46 189.9 179 49.7
Sed0022455 Sechium edule HOM05D007512 ORTHO05D009524 2.3e-46 189.5 182 48.9
arahy.Tifrunner.gnm1.ann1.EFEG4J Arachis hypogaea HOM05D007512 ORTHO05D009524 8.7e-46 187.6 184 48.9
Medtr5g090740 Medicago truncatula HOM05D007512 ORTHO05D009524 8.7e-46 187.6 180 48.9
COL.COLO4_29884 Corchorus olitorius HOM05D007512 ORTHO05D009524 1.1e-45 187.2 190 47.4
TPR.G8778 Trifolium pratense HOM05D007512 ORTHO05D009524 1.1e-45 187.2 180 48.9
HPP92_026664 Vanilla planifolia HOM05D007512 ORTHO05D009524 4.3e-45 185.3 181 51.4
ATR0763G176 Amborella trichopoda HOM05D007512 ORTHO05D009524 7.4e-45 184.5 190 44.7
Gohir.A11G061633 Gossypium hirsutum HOM05D007512 ORTHO05D009524 7.4e-45 184.5 179 48.6
Lalb_Chr11g0069491 Lupinus albus HOM05D007512 ORTHO05D009524 1.4e-43 180.3 164 50.6
CAN.G358.11 Capsicum annuum HOM05D007512 ORTHO05D009524 1.8e-43 179.9 181 49.2
AagrBONN_evm.TU.Sc2ySwM_368.3309 Anthoceros agrestis HOM05D007512 ORTHO05D009524 2.4e-43 179.5 182 51.6
Dinv27197 Davidia involucrata HOM05D007512 ORTHO05D009524 3.1e-43 179.1 161 54.0
AUR62004262 Chenopodium quinoa HOM05D007512 ORTHO05D009524 5.3e-43 178.3 181 50.3
AUR62042750 Chenopodium quinoa HOM05D007512 ORTHO05D009524 6.9e-43 177.9 181 49.7
Ah.05g175540 Amaranthus hybridus HOM05D007512 ORTHO05D009524 3.4e-42 175.6 178 50.6
CSS0045166 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 1.0e-41 174.1 177 52.0
SEGI_32907 Sequoiadendron giganteum HOM05D007512 ORTHO05D009524 1.1e-37 160.6 161 44.7
Mapoly0032s0087 Marchantia polymorpha HOM05D007512 ORTHO05D009524 2.5e-32 142.9 190 42.1
Lsat_1_v5_gn_5_21320 Lactuca sativa HOM05D007512 ORTHO05D009524 2.1e-31 139.8 180 41.1
Pp3c26_9780 Physcomitrium patens HOM05D007512 ORTHO05D009524 3.7e-28 129.0 254 31.5
Pp3c3_10350 Physcomitrium patens HOM05D007512 ORTHO05D009524 8.2e-28 127.9 242 32.2
Nitab4.5_0000241g0240 Nicotiana tabacum HOM05D007512 ORTHO05D009524 3.1e-27 125.9 179 38.5
Actinidia25705 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.7e-23 112.8 182 35.2
SMO367G0698 Selaginella moellendorffii HOM05D007512 ORTHO05D009524 2.3e-22 109.8 199 32.7
PGR142G3775 Punica granatum HOM05D007512 ORTHO05D009524 4.4e-21 105.5 183 36.1
Actinidia18710 Actinidia chinensis HOM05D007512 ORTHO05D009524 9.7e-21 104.4 183 31.1
Atru.chr6.2019 Acer truncatum HOM05D007512 ORTHO05D009524 1.3e-20 104.0 84 48.8
Actinidia24468 Actinidia chinensis HOM05D007512 ORTHO05D009524 6.3e-20 101.7 178 34.8
Actinidia25706 Actinidia chinensis HOM05D007512 ORTHO05D009524 6.3e-20 101.7 172 31.4
Actinidia24467 Actinidia chinensis HOM05D007512 ORTHO05D009524 3.1e-19 99.4 112 47.3
CSS0013803 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 3.1e-19 99.4 161 32.9
TWI36G1125 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 1.2e-18 97.4 163 37.4
Actinidia40448 Actinidia chinensis HOM05D007512 ORTHO05D009524 3.8e-17 92.4 172 35.5
FAN14G4311 Fragaria x ananassa HOM05D000876 ORTHO05D000285 8.5e-17 91.3 110 45.5
Actinidia02493 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.9e-16 90.1 173 35.3
FvH4_6g38850 Fragaria vesca HOM05D000876 ORTHO05D000285 4.7e-15 85.5 79 54.4
Ca_06242_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 1.8e-14 83.6 97 46.4
Actinidia18709 Actinidia chinensis HOM05D007512 ORTHO05D009524 8.8e-14 81.3 163 29.4
Actinidia22804 Actinidia chinensis HOM05D007512 ORTHO05D009524 5.7e-13 78.6 171 27.5
Actinidia02491 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.1e-11 74.3 170 28.8
CSS0000822 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D009524 1.1e-11 74.3 94 40.4
Actinidia09356 Actinidia chinensis HOM05D007512 ORTHO05D009524 9.5e-08 61.2 95 35.8
Sabra01G0030800 Salix brachista HOM05D007512 ORTHO05D009524 1.0e-06 57.8 174 29.3
Sabra09G0120600 Salix brachista HOM05D000125 ORTHO05D020513 1.0e-06 57.8 111 29.7
Actinidia14260 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.3e-06 56.6 78 35.9


User provided reference genes

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