Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_6.g29275 Utricularia gibba HOM05D004332 ORTHO05D005116 1.2e-68 263.1 130 100.0
unitig_747.g21434 Utricularia gibba HOM05D004332 ORTHO05D005116 1.2e-68 263.1 130 100.0
SGA_v2.0_scaffold132G34538 Striga asiatica HOM05D004332 ORTHO05D005116 9.1e-58 226.9 131 83.2
SalBow2G0012 Salvia bowleyana HOM05D004332 ORTHO05D005116 5.9e-57 224.2 134 81.3
Migut.N00901 Erythranthe guttata HOM05D004332 ORTHO05D005116 7.7e-57 223.8 131 83.2
Oeu017398.1 Olea europaea HOM05D004332 ORTHO05D005116 1.3e-56 223.0 132 81.8
Prupe.6G074300 Prunus persica HOM05D004332 ORTHO05D005116 3.8e-56 221.5 133 81.2
MD03G1090100 Malus domestica HOM05D004332 ORTHO05D005116 8.6e-56 220.3 132 79.5
CSS0035025 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 2.5e-55 218.8 131 80.2
COL.COLO4_18528 Corchorus olitorius HOM05D004332 ORTHO05D005116 4.2e-55 218.0 130 77.7
Dinv17021 Davidia involucrata HOM05D004332 ORTHO05D005116 5.5e-55 217.6 131 79.4
Dinv42969 Davidia involucrata HOM05D004332 ORTHO05D005116 5.5e-55 217.6 131 79.4
Dinv43130 Davidia involucrata HOM05D004332 ORTHO05D005116 5.5e-55 217.6 131 79.4
MD11G1099700 Malus domestica HOM05D004332 ORTHO05D005116 7.2e-55 217.2 134 78.4
QL01p031517 Quercus lobata HOM05D004332 ORTHO05D005116 9.5e-55 216.9 129 80.6
Oeu002423.1 Olea europaea HOM05D004332 ORTHO05D005116 1.6e-54 216.1 131 80.2
Gohir.A05G094800 Gossypium hirsutum HOM05D004332 ORTHO05D005116 2.1e-54 215.7 130 77.7
Gohir.D05G095080 Gossypium hirsutum HOM05D004332 ORTHO05D005116 2.1e-54 215.7 130 77.7
Actinidia34413 Actinidia chinensis HOM05D004332 ORTHO05D005116 2.8e-54 215.3 131 78.6
Cc01_g13020 Coffea canephora HOM05D004332 ORTHO05D005116 2.8e-54 215.3 130 80.8
MELO3C025906.2 Cucumis melo HOM05D004332 ORTHO05D005116 2.8e-54 215.3 130 77.7
Dinv04179 Davidia involucrata HOM05D004332 ORTHO05D005116 2.8e-54 215.3 131 78.6
CsaV3_6G016760 Cucumis sativus L. HOM05D004332 ORTHO05D005116 3.6e-54 214.9 130 76.9
Thecc.09G319900 Theobroma cacao HOM05D004332 ORTHO05D005116 3.6e-54 214.9 130 77.7
Gohir.D05G095200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 4.7e-54 214.5 130 76.9
Duzib168G2052 Durio zibethinus HOM05D004332 ORTHO05D005116 8.0e-54 213.8 130 76.9
Gohir.D03G124100 Gossypium hirsutum HOM05D004332 ORTHO05D005116 8.0e-54 213.8 130 76.2
Manes.01G172400 Manihot esculenta HOM05D004332 ORTHO05D005116 1.0e-53 213.4 130 75.4
Rhsim01G0229500 Rhododendron simsii HOM05D004332 ORTHO05D005116 1.0e-53 213.4 130 78.5
Manes.02G131400 Manihot esculenta HOM05D004332 ORTHO05D005116 2.3e-53 212.2 130 76.9
GSVIVG01024938001 Vitis vinifera HOM05D004332 ORTHO05D005116 2.3e-53 212.2 130 77.7
Eucgr.J02045 Eucalyptus grandis HOM05D004332 ORTHO05D005116 4.0e-53 211.5 133 75.2
Gorai.009G098500 Gossypium raimondii HOM05D004332 ORTHO05D005116 4.0e-53 211.5 130 76.9
CiPaw.13G092600 Carya illinoinensis HOM05D004332 ORTHO05D005116 5.2e-53 211.1 130 78.5
ClCG02G020050 Citrullus lanatus HOM05D004332 ORTHO05D005116 5.2e-53 211.1 126 78.6
CANSAT54G0234 Cannabis sativa HOM05D004332 ORTHO05D005116 8.9e-53 210.3 130 76.9
CiPaw.14G067900 Carya illinoinensis HOM05D004332 ORTHO05D005116 8.9e-53 210.3 130 77.7
Gohir.A03G043200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 8.9e-53 210.3 130 75.4
Sed0013921 Sechium edule HOM05D004332 ORTHO05D005116 8.9e-53 210.3 130 74.6
MBI05_g28381_MAGBIO Magnolia biondii HOM05D004332 ORTHO05D005116 1.2e-52 209.9 130 77.7
arahy.Tifrunner.gnm1.ann1.KAW7XL Arachis hypogaea HOM05D004332 ORTHO05D005116 1.5e-52 209.5 130 79.2
FAN25G2250 Fragaria x ananassa HOM05D004332 ORTHO05D005116 1.5e-52 209.5 130 77.7
FvH4_3g36490 Fragaria vesca HOM05D004332 ORTHO05D005116 2.0e-52 209.1 130 77.7
FAN11G3576 Fragaria x ananassa HOM05D004332 ORTHO05D005116 2.0e-52 209.1 130 77.7
FAN16G1081 Fragaria x ananassa HOM05D004332 ORTHO05D005116 2.0e-52 209.1 130 76.9
Gorai.003G130800 Gossypium raimondii HOM05D004332 ORTHO05D005116 2.6e-52 208.8 131 75.6
RcHm_v2.0_Chr5g0065351 Rosa chinensis HOM05D004332 ORTHO05D005116 2.6e-52 208.8 128 79.7
TWI31G0816 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 3.4e-52 208.4 130 74.6
Glyma.11G138900 Glycine max HOM05D004332 ORTHO05D005116 4.4e-52 208.0 130 78.5
AL8G35880 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 5.7e-52 207.6 130 73.8
Duzib150G0187 Durio zibethinus HOM05D004332 ORTHO05D005116 5.7e-52 207.6 130 76.9
TWI75G0441 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 5.7e-52 207.6 130 74.6
Carub.0008s2008 Capsella rubella HOM05D004332 ORTHO05D005116 9.8e-52 206.8 132 74.2
ClCG03G001410 Citrullus lanatus HOM05D004332 ORTHO05D005116 9.8e-52 206.8 130 76.9
CSS0027892 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 1.3e-51 206.5 133 75.9
Glyma.12G062500 Glycine max HOM05D004332 ORTHO05D005116 1.3e-51 206.5 130 76.9
HanXRQChr08g0237001 Helianthus annuus HOM05D004332 ORTHO05D005116 1.3e-51 206.5 130 76.2
Psat5g286720 Pisum sativum HOM05D004332 ORTHO05D005116 1.3e-51 206.5 126 80.2
TPR.G34281 Trifolium pratense HOM05D004332 ORTHO05D005116 1.3e-51 206.5 130 78.5
ATR0559G209 Amborella trichopoda HOM05D004332 ORTHO05D005116 1.7e-51 206.1 130 76.9
TAR633G2148 Trochodendron aralioides HOM05D004332 ORTHO05D005116 1.7e-51 206.1 130 75.4
Actinidia37195 Actinidia chinensis HOM05D004332 ORTHO05D005116 2.2e-51 205.7 130 76.2
Hma1.2p1_0615F.1_g189860 Hydrangea macrophylla HOM05D004332 ORTHO05D005116 2.8e-51 205.3 130 76.2
Rhsim13G0081500 Rhododendron simsii HOM05D004332 ORTHO05D005116 2.8e-51 205.3 130 75.4
Hund04945 Selenicereus undatus HOM05D004332 ORTHO05D005116 2.8e-51 205.3 130 74.6
CARHR285780 Cardamine hirsuta HOM05D004332 ORTHO05D005116 3.7e-51 204.9 132 74.2
Oeu064111.2 Olea europaea HOM05D004332 ORTHO05D005116 3.7e-51 204.9 130 73.1
Ciclev10029562m.g Citrus clementina HOM05D004332 ORTHO05D005116 4.9e-51 204.5 134 73.1
VMungo1127G1024 Vigna mungo HOM05D004332 ORTHO05D005116 4.9e-51 204.5 126 77.0
Lalb_Chr03g0026581 Lupinus albus HOM05D004332 ORTHO05D005116 6.3e-51 204.1 130 75.4
AT5G59410 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 8.3e-51 203.8 131 73.3
Medtr2g097270 Medicago truncatula HOM05D004332 ORTHO05D005116 1.1e-50 203.4 120 80.8
CsaV3_1G034360 Cucumis sativus L. HOM05D004332 ORTHO05D005116 1.4e-50 203.0 130 75.4
Gohir.D07G103500 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.8e-50 202.6 129 75.2
MELO3C020622.2 Cucumis melo HOM05D004332 ORTHO05D005116 2.4e-50 202.2 130 73.1
Lsat_1_v5_gn_9_23661 Lactuca sativa HOM05D004332 ORTHO05D005116 3.1e-50 201.8 130 73.1
EL10Ac7g16034 Beta vulgaris HOM05D004332 ORTHO05D005116 5.4e-50 201.1 130 72.3
Lalb_Chr19g0137881 Lupinus albus HOM05D004332 ORTHO05D005116 5.4e-50 201.1 130 75.4
Phvul.011G063600 Phaseolus vulgaris HOM05D004332 ORTHO05D005116 5.4e-50 201.1 130 76.2
Sp6g21090 Schrenkiella parvula HOM05D004332 ORTHO05D005116 5.4e-50 201.1 130 72.3
Ah.08g219640 Amaranthus hybridus HOM05D004332 ORTHO05D005116 7.0e-50 200.7 130 70.8
AUR62009559 Chenopodium quinoa HOM05D004332 ORTHO05D005116 7.0e-50 200.7 130 73.1
Thhalv10015001m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 7.0e-50 200.7 132 72.7
Nn2g11136 Nelumbo nucifera HOM05D004332 ORTHO05D005116 7.0e-50 200.7 130 73.8
Nitab4.5_0000463g0140 Nicotiana tabacum HOM05D004332 ORTHO05D005116 7.0e-50 200.7 130 73.8
Sed0025770 Sechium edule HOM05D004332 ORTHO05D005116 7.0e-50 200.7 130 73.8
Nitab4.5_0001326g0120 Nicotiana tabacum HOM05D004332 ORTHO05D005116 9.2e-50 200.3 130 73.8
Aa31sc23G410 Aethionema arabicum HOM05D004332 ORTHO05D005116 1.6e-49 199.5 132 73.5
ECA247G3838 Erigeron canadensis HOM05D004332 ORTHO05D005116 1.6e-49 199.5 128 73.4
Potri.009G032100 Populus trichocarpa HOM05D004332 ORTHO05D005116 2.7e-49 198.7 134 70.9
PGSC0003DMG400030417 Solanum tuberosum HOM05D004332 ORTHO05D005116 2.7e-49 198.7 130 73.8
Lj3g0024178 Lotus japonicus HOM05D004332 ORTHO05D005116 3.5e-49 198.4 130 73.8
Sed0019241 Sechium edule HOM05D004332 ORTHO05D005116 5.9e-49 197.6 130 73.1
Sc12g0001450 Simmondsia chinensis HOM05D004332 ORTHO05D005116 5.9e-49 197.6 130 71.5
THA.LOC104814879 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 7.8e-49 197.2 130 70.8
AUR62001771 Chenopodium quinoa HOM05D004332 ORTHO05D005116 1.0e-48 196.8 130 71.5
PGR102G2585 Punica granatum HOM05D004332 ORTHO05D005116 1.0e-48 196.8 132 73.5
Potri.001G241500 Populus trichocarpa HOM05D004332 ORTHO05D005116 2.9e-48 195.3 133 72.2
Solyc06g076260.3 Solanum lycopersicum HOM05D004332 ORTHO05D005116 3.9e-48 194.9 130 71.5
vmacro14542 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 6.6e-48 194.1 118 77.1
Sabra16G0146000 Salix brachista HOM05D004332 ORTHO05D005116 8.6e-48 193.7 145 66.9
BraA04t17767Z Brassica rapa HOM05D004332 ORTHO05D005116 1.1e-47 193.4 133 69.2
CARHR122250 Cardamine hirsuta HOM05D004332 ORTHO05D005116 1.1e-47 193.4 133 68.4
A04p21990 Brassica napus HOM05D004332 ORTHO05D005116 1.5e-47 193.0 133 68.4
AL146U10030 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 3.3e-47 191.8 133 68.4
CAN.G394.64 Capsicum annuum HOM05D004332 ORTHO05D005116 3.3e-47 191.8 131 72.5
Gohir.A07G099000 Gossypium hirsutum HOM05D004332 ORTHO05D005116 3.3e-47 191.8 130 71.5
BcaB06g28270 Brassica carinata HOM05D004332 ORTHO05D005116 5.6e-47 191.0 133 68.4
BcaC02g08120 Brassica carinata HOM05D004332 ORTHO05D005116 5.6e-47 191.0 133 67.7
C04p58150 Brassica napus HOM05D004332 ORTHO05D005116 5.6e-47 191.0 133 67.7
Aa31LG5G7210 Aethionema arabicum HOM05D004332 ORTHO05D005116 7.3e-47 190.7 133 68.4
AT2G29020 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 7.3e-47 190.7 134 67.9
BolC4t27343H Brassica oleracea HOM05D004332 ORTHO05D005116 7.3e-47 190.7 133 67.7
CDE04G0625 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 7.3e-47 190.7 130 69.2
Thhalv10017410m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 9.5e-47 190.3 133 67.7
Gorai.001G111400 Gossypium raimondii HOM05D004332 ORTHO05D005116 9.5e-47 190.3 122 73.8
A07p19440 Brassica napus HOM05D004332 ORTHO05D005116 1.2e-46 189.9 134 66.4
Sc21g0005870 Simmondsia chinensis HOM05D004332 ORTHO05D005116 1.2e-46 189.9 130 70.8
BraA07t29650Z Brassica rapa HOM05D004332 ORTHO05D005116 2.1e-46 189.1 134 65.7
Carub.0004s1001 Capsella rubella HOM05D004332 ORTHO05D005116 2.8e-46 188.7 133 67.7
SEGI_11468 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 3.6e-46 188.3 130 66.2
THA.LOC104810775 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 3.6e-46 188.3 130 69.2
BcaC02g11036 Brassica carinata HOM05D004332 ORTHO05D005116 4.7e-46 188.0 134 65.7
C04p21940 Brassica napus HOM05D004332 ORTHO05D005116 4.7e-46 188.0 134 65.7
BolC4t23714H Brassica oleracea HOM05D004332 ORTHO05D005116 4.7e-46 188.0 134 65.7
CDE07G0755 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 4.7e-46 188.0 130 67.7
arahy.Tifrunner.gnm1.ann1.WMUR0J Arachis hypogaea HOM05D004332 ORTHO05D005116 8.0e-46 187.2 117 77.8
PSO151G0214 Papaver somniferum HOM05D004332 ORTHO05D005116 8.0e-46 187.2 110 76.4
PSO339G1935 Papaver somniferum HOM05D004332 ORTHO05D005116 8.0e-46 187.2 110 76.4
THA.LOC104826319 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 4.0e-45 184.9 133 68.4
Sp4g11830 Schrenkiella parvula HOM05D004332 ORTHO05D005116 5.2e-45 184.5 133 66.2
Aqoxy1G00923 Aquilegia oxysepala HOM05D004332 ORTHO05D005116 6.8e-45 184.1 128 68.8
DCAR_018915 Daucus carota HOM05D004332 ORTHO05D005116 6.8e-45 184.1 120 69.2
BcaB02g10224 Brassica carinata HOM05D004332 ORTHO05D005116 8.9e-45 183.7 134 64.9
THA.LOC104800671 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 4.4e-44 181.4 132 66.7
Atru.chr3.3947 Acer truncatum HOM05D004332 ORTHO05D005116 9.8e-44 180.3 138 68.1
Sabra09G0022800 Salix brachista HOM05D004332 ORTHO05D005116 9.8e-44 180.3 125 69.6
TAR636G3330 Trochodendron aralioides HOM05D004332 ORTHO05D005116 1.7e-43 179.5 119 72.3
arahy.Tifrunner.gnm1.ann1.TT4C38 Arachis hypogaea HOM05D004332 ORTHO05D005116 6.4e-43 177.6 127 69.3
arahy.Tifrunner.gnm1.ann1.A22IES Arachis hypogaea HOM05D004332 ORTHO05D005116 4.1e-42 174.9 120 70.0
Mapoly0045s0062 Marchantia polymorpha HOM05D004332 ORTHO05D005116 6.0e-41 171.0 132 64.4
Zm00001eb266910 Zea mays HOM05D004332 ORTHO05D005116 7.8e-41 170.6 129 62.8
Lsat_1_v5_gn_8_73521 Lactuca sativa HOM05D004332 ORTHO05D005116 1.7e-40 169.5 120 65.8
Os05g0110600 Oryza sativa ssp. japonica HOM05D004332 ORTHO05D005116 1.5e-39 166.4 131 61.8
SMO304G0081 Selaginella moellendorffii HOM05D004332 ORTHO05D005116 1.5e-39 166.4 130 58.5
HanXRQChr07g0197291 Helianthus annuus HOM05D004332 ORTHO05D005116 3.3e-39 165.2 139 60.4
Pp3c16_16760 Physcomitrium patens HOM05D004332 ORTHO05D005116 1.2e-36 156.8 102 72.5
Nn2g13368 Nelumbo nucifera HOM05D004332 ORTHO05D005116 2.0e-36 156.0 91 80.2
AagrBONN_evm.TU.Sc2ySwM_228.3328 Anthoceros agrestis HOM05D004332 ORTHO05D005116 2.6e-36 155.6 132 61.4
Pp3c6_17300 Physcomitrium patens HOM05D004332 ORTHO05D005116 2.5e-31 139.0 119 52.9
Sopen06g032690 Solanum pennellii HOM05D004332 ORTHO05D005116 3.1e-29 132.1 78 80.8
Actinidia07026 Actinidia chinensis HOM05D004332 ORTHO05D005116 3.7e-27 125.2 85 75.3
Haze_24115 Corylus avellana HOM05D004332 ORTHO05D005116 3.2e-26 122.1 76 73.7
FAN21G1178 Fragaria x ananassa HOM05D004332 ORTHO05D005116 6.6e-24 114.4 73 75.3
vmacro03061 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 1.9e-23 112.8 74 70.3
TAR369G0503 Trochodendron aralioides HOM05D004332 ORTHO05D005116 1.1e-21 107.1 75 65.3
AL4G23580 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 1.4e-21 106.7 77 63.6
SEGI_12680 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 3.1e-21 105.5 84 54.8
Actinidia23932 Actinidia chinensis HOM05D004332 ORTHO05D005116 6.4e-19 97.8 60 80.0
Peaxi162Scf00774g00129 Petunia axillaris HOM05D004332 ORTHO05D005116 1.4e-18 96.7 56 83.9
Cre08.g376000 Chlamydomonas reinhardtii HOM05D004332 ORTHO05D005116 9.9e-12 73.9 95 34.7
SHI47893 Sapria himalayana HOM05D004332 ORTHO05D005116 1.3e-11 73.6 50 66.0
HPP92_028206 Vanilla planifolia HOM05D004332 ORTHO05D005116 1.3e-11 73.6 44 72.7
Eucgr.H02119 Eucalyptus grandis HOM05D004332 ORTHO05D005116 6.6e-08 61.2 50 62.0


User provided reference genes

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