Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21379 Utricularia gibba HOM05D007860 ORTHO05D009950 4.5e-42 174.1 84 100.0
Cc00_g31060 Coffea canephora HOM05D007860 ORTHO05D009950 4.6e-18 94.4 53 77.4
Cc02_g07910 Coffea canephora HOM05D007860 ORTHO05D009950 1.3e-17 92.8 53 75.5
Phvul.008G011200 Phaseolus vulgaris HOM05D007860 ORTHO05D009950 2.3e-17 92.0 58 74.1
Cfa009596 Carpinus fangiana HOM05D007860 ORTHO05D009950 3.0e-17 91.7 49 83.7
Glyma.18G290700 Glycine max HOM05D007860 ORTHO05D009950 3.0e-17 91.7 49 83.7
Gohir.D04G062700 Gossypium hirsutum HOM05D007860 ORTHO05D009950 3.9e-17 91.3 61 67.2
Gorai.012G070100 Gossypium raimondii HOM05D007860 ORTHO05D009950 3.9e-17 91.3 61 67.2
Glyma.02G092000 Glycine max HOM05D007860 ORTHO05D009950 8.6e-17 90.1 49 81.6
Gohir.A05G349600 Gossypium hirsutum HOM05D007860 ORTHO05D009950 1.1e-16 89.7 61 65.6
TPR.G1333 Trifolium pratense HOM05D007860 ORTHO05D009950 1.9e-16 89.0 49 77.6
Gohir.A07G000500 Gossypium hirsutum HOM05D007860 ORTHO05D009950 2.5e-16 88.6 49 79.6
CiPaw.01G285600 Carya illinoinensis HOM05D007860 ORTHO05D009950 7.3e-16 87.0 58 69.0
AT4G26055 Arabidopsis thaliana HOM05D007860 ORTHO05D009950 9.5e-16 86.7 61 68.9
CiPaw.01G286200 Carya illinoinensis HOM05D007860 ORTHO05D009950 9.5e-16 86.7 49 75.5
SalBow8G2293 Salvia bowleyana HOM05D007860 ORTHO05D009950 9.5e-16 86.7 46 87.0
Thecc.10G043200 Theobroma cacao HOM05D007860 ORTHO05D009950 9.5e-16 86.7 49 75.5
VMungo1383G1282 Vigna mungo HOM05D007860 ORTHO05D009950 9.5e-16 86.7 52 75.0
Migut.E01407 Erythranthe guttata HOM05D007860 ORTHO05D009950 1.6e-15 85.9 45 86.7
Migut.E01421 Erythranthe guttata HOM05D007860 ORTHO05D009950 1.6e-15 85.9 45 86.7
Peaxi162Scf00760g00224 Petunia axillaris HOM05D007860 ORTHO05D009950 1.6e-15 85.9 49 75.5
Solyc04g150108.1 Solanum lycopersicum HOM05D007860 ORTHO05D009950 1.6e-15 85.9 49 77.6
PGSC0003DMG400027747 Solanum tuberosum HOM05D007860 ORTHO05D009950 1.6e-15 85.9 49 77.6
Prupe.1G341800 Prunus persica HOM05D007860 ORTHO05D009950 2.1e-15 85.5 49 75.5
RcHm_v2.0_Chr4g0445811 Rosa chinensis HOM05D007860 ORTHO05D009950 2.1e-15 85.5 49 77.6
CDE08G0617 Ceratophyllum demersum HOM05D007860 ORTHO05D009950 2.8e-15 85.1 54 70.4
COL.COLO4_15031 Corchorus olitorius HOM05D007860 ORTHO05D009950 2.8e-15 85.1 50 78.0
Nn4g22694 Nelumbo nucifera HOM05D007860 ORTHO05D009950 2.8e-15 85.1 49 81.6
Lalb_Chr11g0073451 Lupinus albus HOM05D007860 ORTHO05D009950 3.6e-15 84.7 49 73.5
Medtr7g026210 Medicago truncatula HOM05D007860 ORTHO05D009950 3.6e-15 84.7 49 77.6
Sabra10G0157800 Salix brachista HOM05D007860 ORTHO05D009950 3.6e-15 84.7 49 73.5
Sc10g0001510 Simmondsia chinensis HOM05D007860 ORTHO05D009950 3.6e-15 84.7 43 88.4
CAN.G786.12 Capsicum annuum HOM05D007860 ORTHO05D009950 4.7e-15 84.3 49 75.5
Nn3g16785 Nelumbo nucifera HOM05D007860 ORTHO05D009950 4.7e-15 84.3 60 56.7
TWI63G0334 Tripterygium wilfordii HOM05D007860 ORTHO05D009950 4.7e-15 84.3 49 79.6
Lj1g0016082 Lotus japonicus HOM05D007860 ORTHO05D009950 6.2e-15 84.0 49 75.5
THA.LOC104817766 Tarenaya hassleriana HOM05D007860 ORTHO05D009950 8.1e-15 83.6 49 81.6
Aa31LG3G410 Aethionema arabicum HOM05D007860 ORTHO05D009950 1.4e-14 82.8 51 76.5
arahy.Tifrunner.gnm1.ann1.WKZY2Y Arachis hypogaea HOM05D007860 ORTHO05D009950 1.4e-14 82.8 42 85.7
Psat3g182840 Pisum sativum HOM05D007860 ORTHO05D009950 1.8e-14 82.4 43 83.7
Hund16092 Selenicereus undatus HOM05D007860 ORTHO05D009950 1.8e-14 82.4 50 74.0
Aqoxy4G02946 Aquilegia oxysepala HOM05D007860 ORTHO05D009950 2.4e-14 82.0 49 73.5
Lalb_Chr10g0091671 Lupinus albus HOM05D007860 ORTHO05D009950 2.4e-14 82.0 49 73.5
Manes.09G185000 Manihot esculenta HOM05D007860 ORTHO05D009950 3.1e-14 81.6 46 78.3
Sed0021911 Sechium edule HOM05D007860 ORTHO05D009950 3.1e-14 81.6 49 75.5
Zm00001eb205410 Zea mays HOM05D007860 ORTHO05D009950 3.1e-14 81.6 47 76.6
HPP92_012590 Vanilla planifolia HOM05D007860 ORTHO05D009950 4.0e-14 81.3 47 74.5
AL7G26930 Arabidopsis lyrata HOM05D007860 ORTHO05D009950 6.8e-14 80.5 49 79.6
Thhalv10026736m.g Eutrema salsugineum HOM05D007860 ORTHO05D009950 6.8e-14 80.5 49 79.6
Oeu017367.1 Olea europaea HOM05D007860 ORTHO05D009950 6.8e-14 80.5 46 80.4
SpUn0576_0010 Schrenkiella parvula HOM05D007860 ORTHO05D009950 6.8e-14 80.5 49 77.6
MD16G1008700 Malus domestica HOM05D007860 ORTHO05D009950 1.5e-13 79.3 48 72.9
BcaC07g38219 Brassica carinata HOM05D007860 ORTHO05D009950 2.0e-13 79.0 61 63.9
A08p20930 Brassica napus HOM05D007860 ORTHO05D009950 2.0e-13 79.0 61 63.9
C08p09770 Brassica napus HOM05D002589 ORTHO05D002742 2.0e-13 79.0 61 63.9
BolC8t48648H Brassica oleracea HOM05D002589 ORTHO05D002742 2.0e-13 79.0 61 63.9
BraA08t34046Z Brassica rapa HOM05D007860 ORTHO05D009950 2.0e-13 79.0 61 63.9
Carub.0007s1490 Capsella rubella HOM05D007860 ORTHO05D009950 2.0e-13 79.0 43 83.7
Potri.010G204200 Populus trichocarpa HOM05D007860 ORTHO05D009950 2.0e-13 79.0 49 69.4
C07p54670 Brassica napus HOM05D007860 ORTHO05D009950 2.6e-13 78.6 49 77.6
BolC7t45956H Brassica oleracea HOM05D007860 ORTHO05D009950 2.6e-13 78.6 49 77.6
HanXRQChr08g0220681 Helianthus annuus HOM05D007860 ORTHO05D009950 2.6e-13 78.6 51 74.5
A03p56460 Brassica napus HOM05D002589 ORTHO05D002742 3.4e-13 78.2 49 75.5
BraA03t14716Z Brassica rapa HOM05D007860 ORTHO05D009950 3.4e-13 78.2 49 75.5
CARHR233560 Cardamine hirsuta HOM05D007860 ORTHO05D009950 3.4e-13 78.2 61 65.6
Ciclev10033443m.g Citrus clementina HOM05D007860 ORTHO05D009950 3.4e-13 78.2 45 82.2
CSS0034636 Camellia sinensis var. sinensis HOM05D007860 ORTHO05D009950 4.4e-13 77.8 43 79.1
MBI05_g22876_MAGBIO Magnolia biondii HOM05D007860 ORTHO05D009950 4.4e-13 77.8 51 68.6
Lsat_1_v5_gn_8_15760 Lactuca sativa HOM05D007860 ORTHO05D009950 5.8e-13 77.4 49 73.5
Actinidia13876 Actinidia chinensis HOM05D007860 ORTHO05D009950 1.7e-12 75.9 45 66.7
MELO3C033702.2 Cucumis melo HOM05D007860 ORTHO05D009950 1.7e-12 75.9 51 64.7
CsaV3_5G026630 Cucumis sativus L. HOM05D007860 ORTHO05D009950 1.7e-12 75.9 51 62.7
vmacro04194 Vaccinium macrocarpon HOM05D007860 ORTHO05D009950 1.7e-12 75.9 87 43.7
PSO170G0009 Papaver somniferum HOM05D007860 ORTHO05D009950 2.2e-12 75.5 44 79.5
FAN22G0325 Fragaria x ananassa HOM05D007860 ORTHO05D009950 4.9e-12 74.3 59 62.7
EL10Ac2g04657 Beta vulgaris HOM05D007860 ORTHO05D009950 6.4e-12 73.9 68 54.4
DCAR_011692 Daucus carota HOM05D007860 ORTHO05D009950 6.4e-12 73.9 49 69.4
ClCG09G019790 Citrullus lanatus HOM05D007860 ORTHO05D009950 2.4e-11 72.0 44 70.5
AT5G57080 Arabidopsis thaliana HOM05D007860 ORTHO05D009950 7.1e-11 70.5 44 77.3
Sp6g18800 Schrenkiella parvula HOM05D007860 ORTHO05D009950 1.6e-10 69.3 42 78.6
BcaB01g04442 Brassica carinata HOM05D007860 ORTHO05D009950 3.0e-09 65.1 42 73.8
BraA03t10609Z Brassica rapa HOM05D007860 ORTHO05D009950 5.1e-09 64.3 42 73.8
SEGI_33557 Sequoiadendron giganteum HOM05D007860 ORTHO05D009950 6.6e-09 63.9 48 66.7
BcaNung07291 Brassica carinata HOM05D007860 ORTHO05D009950 2.1e-07 58.9 42 71.4
RcHm_v2.0_Chr4g0445941 Rosa chinensis HOM05D007860 ORTHO05D009950 4.0e-06 54.7 45 64.4
Pp3c3_14890 Physcomitrium patens HOM05D007860 ORTHO05D009950 5.2e-06 54.3 40 65.0


User provided reference genes

Program Settings