Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21320 Utricularia gibba HOM05D006148 ORTHO05D007955 2.6e-66 255.4 141 100.0
unitig_46.g17987 Utricularia gibba HOM05D006148 ORTHO05D007955 9.6e-61 236.9 140 92.9
SGA_v2.0_scaffold40G15681 Striga asiatica HOM05D006148 ORTHO05D007955 1.4e-48 196.4 139 75.5
SGA_v2.0_scaffold377G50308 Striga asiatica HOM05D006148 ORTHO05D007955 4.2e-48 194.9 139 75.5
Cc02_g08620 Coffea canephora HOM05D006148 ORTHO05D007955 2.7e-47 192.2 140 72.1
CSS0033428 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 1.8e-46 189.5 138 75.4
Hma1.2p1_0840F.1_g226570 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 3.9e-46 188.3 140 71.4
Migut.I00620 Erythranthe guttata HOM05D006148 ORTHO05D007955 1.5e-45 186.4 140 70.7
Manes.02G044300 Manihot esculenta HOM05D006148 ORTHO05D007955 7.4e-45 184.1 140 70.7
Dinv21692 Davidia involucrata HOM05D006148 ORTHO05D007955 9.6e-45 183.7 142 71.1
Actinidia10861 Actinidia chinensis HOM05D006148 ORTHO05D007955 1.3e-44 183.3 128 76.6
MSTRG.9371 Avicennia marina HOM05D006148 ORTHO05D007955 1.6e-44 183.0 140 69.3
Ciclev10022620m.g Citrus clementina HOM05D006148 ORTHO05D007955 1.6e-44 183.0 137 74.5
vmacro14126 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 2.1e-44 182.6 130 73.8
Aqoxy7G03487 Aquilegia oxysepala HOM05D006148 ORTHO05D007955 6.2e-44 181.0 139 69.8
DCAR_005581 Daucus carota HOM05D006148 ORTHO05D007955 3.1e-43 178.7 140 67.1
Oeu040676.1 Olea europaea HOM05D006148 ORTHO05D007955 4.0e-43 178.3 132 69.7
CSS0030063 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 2.0e-42 176.0 132 72.7
Nitab4.5_0003456g0030 Nicotiana tabacum HOM05D006148 ORTHO05D007955 2.0e-42 176.0 140 65.7
Rhsim07G0118900 Rhododendron simsii HOM05D006148 ORTHO05D007955 2.6e-42 175.6 128 71.9
TAR375G0576 Trochodendron aralioides HOM05D006148 ORTHO05D007955 2.6e-42 175.6 139 69.1
Eucgr.D02128 Eucalyptus grandis HOM05D006148 ORTHO05D007955 3.4e-42 175.3 147 63.3
TWI15G0129 Tripterygium wilfordii HOM05D006148 ORTHO05D007955 3.4e-42 175.3 147 63.9
Oeu017209.1 Olea europaea HOM05D006148 ORTHO05D007955 4.5e-42 174.9 140 67.1
MBI15_g47175_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 5.8e-42 174.5 130 72.3
Nitab4.5_0000506g0080 Nicotiana tabacum HOM05D006148 ORTHO05D007955 5.8e-42 174.5 140 65.0
Gohir.D12G216200 Gossypium hirsutum HOM05D006148 ORTHO05D007955 7.6e-42 174.1 131 69.5
Gorai.008G231600 Gossypium raimondii HOM05D006148 ORTHO05D007955 7.6e-42 174.1 131 69.5
Gohir.A12G213600 Gossypium hirsutum HOM05D006148 ORTHO05D007955 1.0e-41 173.7 131 68.7
Duzib068G0643 Durio zibethinus HOM05D006148 ORTHO05D007955 1.7e-41 172.9 140 64.3
CANSAT21G1845 Cannabis sativa HOM05D006148 ORTHO05D007955 4.9e-41 171.4 132 68.2
Nitab4.5_0007628g0010 Nicotiana tabacum HOM05D006148 ORTHO05D007955 6.5e-41 171.0 145 62.8
PGSC0003DMG400026577 Solanum tuberosum HOM05D006148 ORTHO05D007955 6.5e-41 171.0 140 62.9
Potri.012G038600 Populus trichocarpa HOM05D006148 ORTHO05D007955 8.4e-41 170.6 129 69.8
Peaxi162Scf00190g00088 Petunia axillaris HOM05D006148 ORTHO05D007955 1.9e-40 169.5 137 62.8
Atru.chr9.1220 Acer truncatum HOM05D006148 ORTHO05D007955 2.5e-40 169.1 139 64.7
CAN.G761.17 Capsicum annuum HOM05D006148 ORTHO05D007955 2.5e-40 169.1 142 63.4
ClCG09G012770 Citrullus lanatus HOM05D006148 ORTHO05D007955 2.5e-40 169.1 140 63.6
PGR031G0321 Punica granatum HOM05D006148 ORTHO05D007955 3.2e-40 168.7 128 68.0
Glyma.16G092500 Glycine max HOM05D006148 ORTHO05D007955 5.5e-40 167.9 131 66.4
Solyc06g060920.3 Solanum lycopersicum HOM05D006148 ORTHO05D007955 5.5e-40 167.9 140 62.1
Solyc08g077970.2 Solanum lycopersicum HOM05D006148 ORTHO05D007955 5.5e-40 167.9 140 62.9
Sopen06g021070 Solanum pennellii HOM05D006148 ORTHO05D007955 5.5e-40 167.9 140 62.1
CiPaw.12G047200 Carya illinoinensis HOM05D006148 ORTHO05D007955 1.2e-39 166.8 131 66.4
Sed0014825 Sechium edule HOM05D006148 ORTHO05D007955 1.6e-39 166.4 146 60.3
Thecc.03G242700 Theobroma cacao HOM05D006148 ORTHO05D007955 2.1e-39 166.0 123 70.7
Sopen08g026480 Solanum pennellii HOM05D006148 ORTHO05D007955 2.7e-39 165.6 140 62.1
Ca_20510_v3 Cicer arietinum L. HOM05D006148 ORTHO05D007955 3.5e-39 165.2 129 65.9
PGSC0003DMG400026249 Solanum tuberosum HOM05D006148 ORTHO05D007955 3.5e-39 165.2 140 62.1
Prupe.5G058400 Prunus persica HOM05D006148 ORTHO05D007955 6.0e-39 164.5 126 68.3
CsaV3_3G049830 Cucumis sativus L. HOM05D006148 ORTHO05D007955 7.9e-39 164.1 140 64.3
Rhsim07G0118700 Rhododendron simsii HOM05D006148 ORTHO05D007955 7.9e-39 164.1 147 62.6
DCAR_008334 Daucus carota HOM05D006148 ORTHO05D007955 1.0e-38 163.7 129 66.7
Lj3A721T48 Lonicera japonica HOM05D006148 ORTHO05D007955 1.3e-38 163.3 118 72.0
Medtr3g086600 Medicago truncatula HOM05D006148 ORTHO05D007955 1.8e-38 162.9 131 64.1
MD04G1051900 Malus domestica HOM05D006148 ORTHO05D007955 2.3e-38 162.5 140 62.1
Sabra12G0027000 Salix brachista HOM05D006148 ORTHO05D007955 3.9e-38 161.8 140 63.6
Psat5g091640 Pisum sativum HOM05D006148 ORTHO05D007955 5.1e-38 161.4 131 64.9
MELO3C003333.2 Cucumis melo HOM05D006148 ORTHO05D007955 1.1e-37 160.2 125 66.4
MD06G1048200 Malus domestica HOM05D006148 ORTHO05D007955 1.5e-37 159.8 140 61.4
Lj2A228G47 Lonicera japonica HOM05D006148 ORTHO05D007955 1.9e-37 159.5 112 75.0
Sc22g0005540 Simmondsia chinensis HOM05D006148 ORTHO05D007955 1.9e-37 159.5 143 62.9
Phvul.010G018500 Phaseolus vulgaris HOM05D006148 ORTHO05D007955 2.5e-37 159.1 131 63.4
Lalb_Chr18g0047251 Lupinus albus HOM05D006148 ORTHO05D007955 3.3e-37 158.7 139 65.5
RcHm_v2.0_Chr7g0205301 Rosa chinensis HOM05D006148 ORTHO05D007955 5.7e-37 157.9 147 59.9
TPR.G30538 Trifolium pratense HOM05D006148 ORTHO05D007955 7.4e-37 157.5 131 61.8
Glyma.09G078400 Glycine max HOM05D006148 ORTHO05D007955 1.3e-36 156.8 113 71.7
VMungo0331G0425 Vigna mungo HOM05D006148 ORTHO05D007955 1.3e-36 156.8 121 69.4
Lj3g0001636 Lotus japonicus HOM05D006148 ORTHO05D007955 1.6e-36 156.4 130 64.6
Sed0021147 Sechium edule HOM05D006148 ORTHO05D007955 2.8e-36 155.6 129 61.2
SalBow1G4160 Salvia bowleyana HOM05D006148 ORTHO05D007955 3.7e-36 155.2 123 67.5
Carub.0007s2441 Capsella rubella HOM05D006148 ORTHO05D007955 6.3e-36 154.5 134 60.4
Lalb_Chr15g0078661 Lupinus albus HOM05D006148 ORTHO05D007955 6.3e-36 154.5 129 63.6
ATR0767G234 Amborella trichopoda HOM05D006148 ORTHO05D007955 1.1e-35 153.7 119 68.1
EL10Ac5g12797 Beta vulgaris HOM05D006148 ORTHO05D007955 1.1e-35 153.7 125 65.6
FvH4_5g20230 Fragaria vesca HOM05D006148 ORTHO05D007955 1.1e-35 153.7 147 58.5
PSO541G2943 Papaver somniferum HOM05D006148 ORTHO05D007955 1.1e-35 153.7 124 63.7
Hund11457 Selenicereus undatus HOM05D006148 ORTHO05D007955 1.1e-35 153.7 125 68.0
FAN13G2154 Fragaria x ananassa HOM05D006148 ORTHO05D007955 3.1e-35 152.1 147 57.8
FAN13G3051 Fragaria x ananassa HOM05D006148 ORTHO05D007955 3.1e-35 152.1 147 57.8
HPP92_005702 Vanilla planifolia HOM05D006148 ORTHO05D007955 6.9e-35 151.0 124 64.5
BcaNung00135 Brassica carinata HOM05D006148 ORTHO05D007955 9.0e-35 150.6 134 60.4
AUR62017180 Chenopodium quinoa HOM05D006148 ORTHO05D007955 9.0e-35 150.6 125 63.2
CDE04G1348 Ceratophyllum demersum HOM05D006148 ORTHO05D007955 2.0e-34 149.4 142 57.0
Lsat_1_v5_gn_3_16181 Lactuca sativa HOM05D006148 ORTHO05D007955 2.0e-34 149.4 139 56.1
arahy.Tifrunner.gnm1.ann1.0GR2GF Arachis hypogaea HOM05D006148 ORTHO05D007955 2.6e-34 149.1 129 58.9
arahy.Tifrunner.gnm1.ann1.L2DS42 Arachis hypogaea HOM05D006148 ORTHO05D007955 2.6e-34 149.1 129 58.9
THA.LOC104814463 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 2.6e-34 149.1 134 61.9
COL.COLO4_07508 Corchorus olitorius HOM05D006148 ORTHO05D007955 3.4e-34 148.7 140 57.1
HanXRQChr17g0550021 Helianthus annuus HOM05D006148 ORTHO05D007955 3.4e-34 148.7 129 59.7
A01p20300 Brassica napus HOM05D006148 ORTHO05D007955 4.5e-34 148.3 131 61.1
BolC1t02497H Brassica oleracea HOM05D006148 ORTHO05D007955 4.5e-34 148.3 131 60.3
Aa31LG2G13090 Aethionema arabicum HOM05D006148 ORTHO05D007955 5.9e-34 147.9 130 60.8
BcaC09g50434 Brassica carinata HOM05D006148 ORTHO05D007955 5.9e-34 147.9 131 60.3
BraA01t01958Z Brassica rapa HOM05D006148 ORTHO05D007955 5.9e-34 147.9 131 60.3
ECA248G1075 Erigeron canadensis HOM05D006148 ORTHO05D007955 5.9e-34 147.9 129 57.4
Sp7g17180 Schrenkiella parvula HOM05D006148 ORTHO05D007955 5.9e-34 147.9 134 59.0
THA.LOC104807925 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 5.9e-34 147.9 134 61.9
C01p25460 Brassica napus HOM05D006148 ORTHO05D007955 7.6e-34 147.5 131 59.5
THA.LOC104812735 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 2.2e-33 146.0 134 59.0
PSO675G9254 Papaver somniferum HOM05D006148 ORTHO05D007955 1.1e-32 143.7 124 62.1
FAN04G0567 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.4e-32 143.3 148 56.1
Hma1.2p1_1008F.1_g247180 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 5.5e-32 141.4 113 72.6
AT4G17010 Arabidopsis thaliana HOM05D006148 ORTHO05D007955 3.6e-31 138.7 134 57.5
Haze_05448 Corylus avellana HOM05D006148 ORTHO05D007955 3.6e-31 138.7 199 45.2
Nn1g00796 Nelumbo nucifera HOM05D006148 ORTHO05D007955 1.8e-30 136.3 119 66.4
FAN08G3523 Fragaria x ananassa HOM05D006148 ORTHO05D007955 2.3e-30 136.0 178 47.8
Os04g0431800 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 2.3e-30 136.0 130 55.4
CARHR223570 Cardamine hirsuta HOM05D006148 ORTHO05D007955 8.7e-30 134.0 134 53.7
AL7G37710 Arabidopsis lyrata HOM05D006148 ORTHO05D007955 3.3e-29 132.1 134 55.2
Os02g0494600 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 5.7e-29 131.3 130 53.8
Thhalv10026445m.g Eutrema salsugineum HOM05D006148 ORTHO05D007955 9.7e-29 130.6 134 54.5
Zm00001eb422600 Zea mays HOM05D006148 ORTHO05D007955 5.3e-27 124.8 107 61.7
MBI06_g25325_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 2.0e-26 122.9 95 69.5
QL12p009037 Quercus lobata HOM05D006148 ORTHO05D007955 3.6e-23 112.1 298 31.2
vmacro00048 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 3.9e-22 108.6 76 75.0
Ah.07g196390 Amaranthus hybridus HOM05D006148 ORTHO05D007955 7.4e-21 104.4 96 58.3
Lj2A721G5 Lonicera japonica HOM05D006148 ORTHO05D007955 8.2e-20 100.9 73 72.6
SEGI_12345 Sequoiadendron giganteum HOM05D006148 ORTHO05D007955 1.7e-17 93.2 136 41.2
Cpa.g.sc1152.2 Carica papaya HOM05D006148 ORTHO05D007955 2.9e-17 92.4 76 61.8
AUR62010708 Chenopodium quinoa HOM05D006148 ORTHO05D007955 1.2e-15 87.0 125 44.0
AUR62027260 Chenopodium quinoa HOM05D006148 ORTHO05D007955 1.2e-15 87.0 125 44.0
Nitab4.5_0000500g0150 Nicotiana tabacum HOM05D006148 ORTHO05D007955 3.0e-14 82.4 140 40.7
MBI15_g37973_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 9.1e-11 70.9 66 60.6
Oeu017208.1 Olea europaea HOM05D002196 ORTHO05D002565 3.5e-10 68.9 67 55.2


User provided reference genes

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