Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21312 Utricularia gibba HOM05D005754 ORTHO05D006843 3.5e-161 571.6 304 100.0
SalBow5G0150 Salvia bowleyana HOM05D005754 ORTHO05D006843 3.8e-123 445.3 304 76.3
MSTRG.26599 Avicennia marina HOM05D005754 ORTHO05D006843 1.3e-118 430.3 304 74.0
Nitab4.5_0006933g0010 Nicotiana tabacum HOM05D005754 ORTHO05D006843 2.9e-115 419.1 304 71.4
Nitab4.5_0006976g0040 Nicotiana tabacum HOM05D005754 ORTHO05D006843 9.4e-114 414.1 304 70.7
CAN.G809.72 Capsicum annuum HOM05D005754 ORTHO05D006843 1.2e-113 413.7 304 70.7
Sopen02g026230 Solanum pennellii HOM05D005754 ORTHO05D006843 2.7e-113 412.5 304 70.7
PGSC0003DMG400017743 Solanum tuberosum HOM05D005754 ORTHO05D006843 2.7e-113 412.5 304 70.7
Solyc02g081610.3 Solanum lycopersicum HOM05D005754 ORTHO05D006843 1.0e-112 410.6 304 70.4
PGSC0003DMG400024410 Solanum tuberosum HOM05D005754 ORTHO05D006843 2.3e-112 409.5 304 70.4
Rhsim08G0028000 Rhododendron simsii HOM05D005754 ORTHO05D006843 4.0e-112 408.7 304 71.4
Oeu063995.1 Olea europaea HOM05D005754 ORTHO05D006843 1.2e-111 407.1 304 71.4
vmacro03555 Vaccinium macrocarpon HOM05D005754 ORTHO05D006843 1.2e-111 407.1 304 70.7
Migut.H00867 Erythranthe guttata HOM05D005754 ORTHO05D006843 4.4e-111 405.2 290 72.8
Cc09_g05360 Coffea canephora HOM05D005754 ORTHO05D006843 8.3e-110 401.0 297 70.4
Duzib151G1210 Durio zibethinus HOM05D005754 ORTHO05D006843 4.1e-109 398.7 304 67.8
Rhsim02G0117500 Rhododendron simsii HOM05D005754 ORTHO05D006843 4.1e-109 398.7 304 69.4
Thecc.04G266000 Theobroma cacao HOM05D005754 ORTHO05D006843 3.5e-108 395.6 304 66.8
CSS0030019 Camellia sinensis var. sinensis HOM05D005754 ORTHO05D006843 1.3e-107 393.7 304 69.4
COL.COLO4_15977 Corchorus olitorius HOM05D005754 ORTHO05D006843 3.8e-107 392.1 304 66.8
CiPaw.09G178700 Carya illinoinensis HOM05D005754 ORTHO05D006843 8.6e-107 391.0 304 66.4
Nn2g13637 Nelumbo nucifera HOM05D005754 ORTHO05D006843 1.9e-106 389.8 304 67.8
Nn2g13638 Nelumbo nucifera HOM05D005754 ORTHO05D006843 1.9e-106 389.8 304 67.8
CiPaw.09G178800 Carya illinoinensis HOM05D005754 ORTHO05D006843 3.3e-106 389.0 304 66.4
PSO801G0209 Papaver somniferum HOM05D005754 ORTHO05D006843 5.5e-106 388.3 295 68.1
TAR636G0743 Trochodendron aralioides HOM05D005754 ORTHO05D006843 7.2e-106 387.9 304 66.8
TAR636G1551 Trochodendron aralioides HOM05D005754 ORTHO05D006843 7.2e-106 387.9 304 66.8
Ca_04011_v3 Cicer arietinum L. HOM05D005754 ORTHO05D006843 2.1e-105 386.3 298 66.8
DCAR_002228 Daucus carota HOM05D005754 ORTHO05D006843 6.1e-105 384.8 304 67.1
Glyma.12G019600 Glycine max HOM05D005754 ORTHO05D006843 6.1e-105 384.8 298 66.4
Medtr3g077990 Medicago truncatula HOM05D005754 ORTHO05D006843 1.0e-104 384.0 298 66.8
Ciclev10016094m.g Citrus clementina HOM05D005754 ORTHO05D006843 1.4e-104 383.6 300 65.7
Potri.003G074300 Populus trichocarpa HOM05D005754 ORTHO05D006843 1.8e-104 383.3 289 67.8
Sabra03G0045000 Salix brachista HOM05D005754 ORTHO05D006843 2.3e-104 382.9 290 67.9
Aqoxy2G00957 Aquilegia oxysepala HOM05D005754 ORTHO05D006843 3.0e-104 382.5 300 67.7
Potri.001G160600 Populus trichocarpa HOM05D005754 ORTHO05D006843 4.0e-104 382.1 297 65.7
TPR.G24478 Trifolium pratense HOM05D005754 ORTHO05D006843 4.0e-104 382.1 298 66.8
Cfa001129 Carpinus fangiana HOM05D005754 ORTHO05D006843 5.2e-104 381.7 304 66.4
Lalb_Chr17g0344101 Lupinus albus HOM05D005754 ORTHO05D006843 5.2e-104 381.7 297 65.7
Manes.16G050000 Manihot esculenta HOM05D005754 ORTHO05D006843 5.2e-104 381.7 304 65.8
QL03p068630 Quercus lobata HOM05D005754 ORTHO05D006843 5.2e-104 381.7 303 64.7
QL05p030092 Quercus lobata HOM05D005754 ORTHO05D006843 5.2e-104 381.7 303 64.7
VMungo1127G0046 Vigna mungo HOM05D005754 ORTHO05D006843 8.9e-104 380.9 298 66.1
Cpa.g.sc17.6 Carica papaya HOM05D005754 ORTHO05D006843 1.2e-103 380.6 304 65.5
Haze_05263 Corylus avellana HOM05D005754 ORTHO05D006843 1.5e-103 380.2 303 66.0
PSO339G5576 Papaver somniferum HOM05D005754 ORTHO05D006843 2.6e-103 379.4 294 67.3
SGA_v2.0_scaffold184G40027 Striga asiatica HOM05D005754 ORTHO05D006843 3.4e-103 379.0 305 68.5
HanXRQChr04g0115041 Helianthus annuus HOM05D005754 ORTHO05D006843 1.3e-102 377.1 281 69.0
Sc15g0000060 Simmondsia chinensis HOM05D005754 ORTHO05D006843 1.7e-102 376.7 304 64.5
THA.LOC104798565 Tarenaya hassleriana HOM05D005754 ORTHO05D006843 2.2e-102 376.3 305 65.6
Gohir.D09G228000 Gossypium hirsutum HOM05D005754 ORTHO05D006843 2.8e-102 375.9 304 64.1
Gorai.006G250700 Gossypium raimondii HOM05D005754 ORTHO05D006843 3.7e-102 375.6 304 63.8
Lj2P343T23 Lonicera japonica HOM05D005754 ORTHO05D006843 1.4e-101 373.6 281 70.5
TPR.G21775 Trifolium pratense HOM05D005754 ORTHO05D006843 1.4e-101 373.6 298 64.8
Gohir.A09G227000 Gossypium hirsutum HOM05D005754 ORTHO05D006843 2.4e-101 372.9 304 63.8
TWI74G1242 Tripterygium wilfordii HOM05D005754 ORTHO05D006843 3.2e-101 372.5 304 63.8
Atru.chr10.361 Acer truncatum HOM05D005754 ORTHO05D006843 4.1e-101 372.1 297 64.0
arahy.Tifrunner.gnm1.ann1.RJAX1V Arachis hypogaea HOM05D005754 ORTHO05D006843 4.1e-101 372.1 305 63.9
Os02g0622200 Oryza sativa ssp. japonica HOM05D005754 ORTHO05D006843 9.2e-101 370.9 290 66.9
TAR633G0926 Trochodendron aralioides HOM05D005754 ORTHO05D006843 9.2e-101 370.9 304 65.8
MD05G1011700 Malus domestica HOM05D005754 ORTHO05D006843 1.2e-100 370.5 304 64.8
ATR0618G331 Amborella trichopoda HOM05D005754 ORTHO05D006843 1.3e-99 367.1 295 64.7
TWI53G2110 Tripterygium wilfordii HOM05D005754 ORTHO05D006843 1.3e-99 367.1 296 65.5
arahy.Tifrunner.gnm1.ann1.9I9HCV Arachis hypogaea HOM05D005754 ORTHO05D006843 2.3e-99 366.3 305 63.3
CARHR129140 Cardamine hirsuta HOM05D005754 ORTHO05D006843 2.3e-99 366.3 305 64.3
MELO3C021702.2 Cucumis melo HOM05D005754 ORTHO05D006843 2.9e-99 365.9 304 64.8
ClCG01G009960 Citrullus lanatus HOM05D005754 ORTHO05D006843 8.6e-99 364.4 304 64.8
FvH4_2g14913 Fragaria vesca HOM05D005754 ORTHO05D006843 1.1e-98 364.0 296 65.5
AT2G34980 Arabidopsis thaliana HOM05D005754 ORTHO05D006843 1.5e-98 363.6 305 63.6
Aa31LG9G16220 Aethionema arabicum HOM05D005754 ORTHO05D006843 1.9e-98 363.2 305 64.6
Ah.01g016960 Amaranthus hybridus HOM05D005754 ORTHO05D006843 2.5e-98 362.8 296 65.5
Thhalv10016993m.g Eutrema salsugineum HOM05D005754 ORTHO05D006843 7.3e-98 361.3 291 65.6
Lsat_1_v5_gn_5_184141 Lactuca sativa HOM05D005754 ORTHO05D006843 9.5e-98 360.9 298 64.1
Dinv31187 Davidia involucrata HOM05D005754 ORTHO05D006843 1.2e-97 360.5 304 65.5
BraA05t20016Z Brassica rapa HOM05D005754 ORTHO05D006843 1.6e-97 360.1 291 65.6
Prupe.8G016600 Prunus persica HOM05D005754 ORTHO05D006843 2.8e-97 359.4 295 64.7
PGR142G3917 Punica granatum HOM05D005754 ORTHO05D006843 3.6e-97 359.0 298 62.4
Lj3g0027197 Lotus japonicus HOM05D005754 ORTHO05D006843 8.0e-97 357.8 297 63.0
Zm00001eb185080 Zea mays HOM05D005754 ORTHO05D006843 8.0e-97 357.8 289 65.1
RcHm_v2.0_Chr6g0277521 Rosa chinensis HOM05D005754 ORTHO05D006843 1.4e-96 357.1 296 64.2
Sed0006244 Sechium edule HOM05D005754 ORTHO05D006843 6.8e-96 354.8 304 62.8
FvH4_1g22930 Fragaria vesca HOM05D005754 ORTHO05D006843 8.9e-96 354.4 304 63.2
FAN24G3472 Fragaria x ananassa HOM05D005754 ORTHO05D006843 2.6e-95 352.8 296 64.2
BolC4t22971H Brassica oleracea HOM05D005754 ORTHO05D006843 3.4e-95 352.4 291 64.3
BcaB02g09492 Brassica carinata HOM05D005754 ORTHO05D006843 4.4e-95 352.1 290 64.1
C04p13810 Brassica napus HOM05D005754 ORTHO05D006843 5.8e-95 351.7 308 61.7
RcHm_v2.0_Chr3g0496061 Rosa chinensis HOM05D005754 ORTHO05D006843 1.3e-94 350.5 304 61.8
BcaB02g09491 Brassica carinata HOM05D005754 ORTHO05D006843 1.7e-94 350.1 306 62.4
A05p10720 Brassica napus HOM05D005754 ORTHO05D006843 2.9e-94 349.4 291 63.6
Prupe.7G012900 Prunus persica HOM05D005754 ORTHO05D006843 2.9e-94 349.4 304 60.9
MD12G1011000 Malus domestica HOM05D005754 ORTHO05D006843 8.3e-94 347.8 304 60.2
SEGI_24883 Sequoiadendron giganteum HOM05D005754 ORTHO05D006843 8.3e-94 347.8 302 58.9
EL10Ac9g21106 Beta vulgaris HOM05D005754 ORTHO05D006843 1.1e-93 347.4 296 62.8
FAN28G1898 Fragaria x ananassa HOM05D005754 ORTHO05D006843 1.4e-93 347.1 304 61.5
AUR62038334 Chenopodium quinoa HOM05D005754 ORTHO05D006843 1.6e-92 343.6 295 62.7
HPP92_025694 Vanilla planifolia HOM05D005754 ORTHO05D006843 3.5e-92 342.4 290 62.4
Carub.0004s1667 Capsella rubella HOM05D005754 ORTHO05D006843 1.0e-91 340.9 305 61.0
BcaC02g07743 Brassica carinata HOM05D004145 ORTHO05D006843 8.6e-91 337.8 304 61.2
AL4G30990 Arabidopsis lyrata HOM05D005754 ORTHO05D006843 2.5e-90 336.3 305 60.7
SHI51133 Sapria himalayana HOM05D005754 ORTHO05D006843 7.3e-90 334.7 299 60.9
FAN19G0110 Fragaria x ananassa HOM05D005754 ORTHO05D006843 3.6e-89 332.4 281 63.7
Lsat_1_v5_gn_2_60361 Lactuca sativa HOM05D005754 ORTHO05D006843 5.2e-88 328.6 273 64.1
AUR62023912 Chenopodium quinoa HOM05D005754 ORTHO05D006843 8.3e-86 321.2 281 62.3
FAN26G0490 Fragaria x ananassa HOM05D005754 ORTHO05D006843 1.2e-84 317.4 281 61.9
Eucgr.G02638 Eucalyptus grandis HOM05D005754 ORTHO05D006843 5.1e-83 312.0 297 57.6
SHI47983 Sapria himalayana HOM05D005754 ORTHO05D006843 7.8e-76 288.1 279 59.1
Pp3c1_31960 Physcomitrium patens HOM05D005754 ORTHO05D006843 1.8e-72 276.9 306 49.7
Psat4g130160 Pisum sativum HOM05D005754 ORTHO05D006843 1.6e-68 263.8 230 61.7
Phvul.011G021750 Phaseolus vulgaris HOM05D005754 ORTHO05D006843 4.3e-66 255.8 192 67.2
QL06p000087 Quercus lobata HOM05D005754 ORTHO05D006843 5.3e-64 248.8 295 50.2
AagrBONN_evm.TU.Sc2ySwM_368.2727 Anthoceros agrestis HOM05D005754 ORTHO05D006843 9.0e-64 248.1 294 48.3
SMO174G0201 Selaginella moellendorffii HOM05D005754 ORTHO05D006843 7.9e-60 235.0 291 47.8
FAN27G3249 Fragaria x ananassa HOM05D005754 ORTHO05D006843 1.7e-59 233.8 198 65.2
AUR62040653 Chenopodium quinoa HOM05D002008 ORTHO05D006843 4.9e-54 215.7 200 61.5
Atru.chr10.357 Acer truncatum HOM05D005754 ORTHO05D006843 2.4e-53 213.4 169 63.3
SEGI_06024 Sequoiadendron giganteum HOM05D005754 ORTHO05D006843 4.2e-53 212.6 194 57.2
Mapoly0096s0067 Marchantia polymorpha HOM05D005754 ORTHO05D006843 1.6e-52 210.7 336 40.5
GSVIVG01012143001 Vitis vinifera HOM05D005754 ORTHO05D006843 2.0e-47 193.7 159 62.9
Phvul.011G022000 Phaseolus vulgaris HOM05D005754 ORTHO05D006843 9.3e-45 184.9 139 66.9
ECA238G2846 Erigeron canadensis HOM05D005754 ORTHO05D006843 1.3e-43 181.0 142 64.8
ClCG01G008540 Citrullus lanatus HOM05D005754 ORTHO05D006843 2.3e-43 180.3 293 41.0
Psat4g130000 Pisum sativum HOM05D005754 ORTHO05D006843 5.5e-37 159.1 238 46.2
CBR_g21245 Chara braunii HOM05D005754 ORTHO05D006843 1.0e-35 154.8 182 45.6
Peaxi162Scf00048g00146 Petunia axillaris HOM05D005754 ORTHO05D006843 2.5e-34 150.2 211 46.4
Psat7g123440 Pisum sativum HOM05D005754 ORTHO05D006843 2.4e-32 143.7 186 45.7
TPR.G29739 Trifolium pratense HOM05D005754 ORTHO05D006843 6.5e-30 135.6 113 63.7
CSS0033773 Camellia sinensis var. sinensis HOM05D005754 ORTHO05D006843 3.2e-29 133.3 169 47.9
Nitab4.5_0011913g0010 Nicotiana tabacum HOM05D005754 ORTHO05D006843 2.1e-28 130.6 99 68.7
Sp2g07050 Schrenkiella parvula HOM05D005754 ORTHO05D006843 7.9e-28 128.6 109 64.2
FAN15G0194 Fragaria x ananassa HOM05D005754 ORTHO05D006843 7.2e-21 105.5 93 61.3
Cre02.g109850 Chlamydomonas reinhardtii HOM05D005754 ORTHO05D006843 8.8e-19 98.6 296 30.7
CARHR278340 Cardamine hirsuta HOM05D005754 ORTHO05D006843 2.6e-18 97.1 86 59.3
BcaC02g11579 Brassica carinata HOM05D005754 ORTHO05D006843 3.5e-15 86.7 60 66.7
Hund00745 Selenicereus undatus HOM05D005754 ORTHO05D006843 1.3e-14 84.7 46 80.4
CsaV3_1G018460 Cucumis sativus L. HOM05D001859 ORTHO05D001836 2.5e-13 80.5 54 66.7
Cfa024382 Carpinus fangiana HOM05D005754 ORTHO05D006843 4.2e-13 79.7 172 33.7
MCO15G034 Micromonas commoda HOM05D005754 ORTHO05D006843 6.1e-12 75.9 302 26.2
Medtr3g464840 Medicago truncatula HOM05D000092 ORTHO05D005910 1.4e-11 74.7 85 51.8
Psat4g159400 Pisum sativum HOM05D003463 ORTHO05D004846 3.1e-08 63.5 150 31.3
BcaB06g28814 Brassica carinata HOM05D005754 ORTHO05D006843 8.5e-06 55.5 56 48.2


User provided reference genes

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