Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21289 Utricularia gibba HOM05D008155 ORTHO05D010411 9.9e-64 246.5 115 100.0
unitig_699.g19831 Utricularia gibba HOM05D008155 ORTHO05D010411 3.8e-39 164.9 124 68.5
SalBow4G1718 Salvia bowleyana HOM05D008155 ORTHO05D010411 1.7e-15 86.3 128 43.0
SalBow4G2153 Salvia bowleyana HOM05D008155 ORTHO05D010411 1.7e-15 86.3 128 43.0
Oeu034763.2 Olea europaea HOM05D008155 ORTHO05D010411 1.6e-13 79.7 122 36.9
MSTRG.5176 Avicennia marina HOM05D008155 ORTHO05D010411 2.3e-12 75.9 119 42.9
QL03p011396 Quercus lobata HOM05D008155 ORTHO05D010411 7.4e-11 70.9 51 60.8
SalBow8G5556 Salvia bowleyana HOM05D008155 ORTHO05D010411 4.8e-10 68.2 51 58.8
Lsat_1_v5_gn_5_146861 Lactuca sativa HOM05D008155 ORTHO05D010411 2.4e-09 65.9 105 37.1
CSS0018964 Camellia sinensis var. sinensis HOM05D008155 ORTHO05D010411 9.1e-09 63.9 102 41.2
Migut.N00987 Erythranthe guttata HOM05D008155 ORTHO05D010411 1.2e-08 63.5 100 39.0
Ciclev10029557m.g Citrus clementina HOM05D008155 ORTHO05D010411 2.0e-08 62.8 48 60.4
DCAR_022333 Daucus carota HOM05D008155 ORTHO05D010411 3.4e-08 62.0 119 34.5
Manes.09G182600 Manihot esculenta HOM05D008155 ORTHO05D010411 5.9e-08 61.2 48 62.5
vmacro19804 Vaccinium macrocarpon HOM05D003050 ORTHO05D003513 1.0e-07 60.5 80 45.0
Solyc01g102460.4 Solanum lycopersicum HOM05D008155 ORTHO05D010411 1.3e-07 60.1 48 54.2
Sopen01g044900 Solanum pennellii HOM05D008155 ORTHO05D010411 1.3e-07 60.1 48 54.2
Potri.013G000200 Populus trichocarpa HOM05D008155 ORTHO05D010411 3.8e-07 58.5 56 55.4
PGSC0003DMG400018233 Solanum tuberosum HOM05D008155 ORTHO05D010411 3.8e-07 58.5 48 52.1
CSS0011875 Camellia sinensis var. sinensis HOM05D008155 ORTHO05D010411 8.5e-07 57.4 101 33.7
Manes.08G106200 Manihot esculenta HOM05D008155 ORTHO05D010411 8.5e-07 57.4 48 60.4
TAR362G0658 Trochodendron aralioides HOM05D008155 ORTHO05D010411 1.1e-06 57.0 87 40.2
Gorai.013G241100 Gossypium raimondii HOM05D008155 ORTHO05D010411 1.4e-06 56.6 49 53.1
MD04G1183800 Malus domestica HOM05D008155 ORTHO05D010411 1.9e-06 56.2 48 50.0
MD12G1197100 Malus domestica HOM05D008155 ORTHO05D010411 1.9e-06 56.2 48 50.0
RcHm_v2.0_Chr3g0459031 Rosa chinensis HOM05D008155 ORTHO05D010411 3.2e-06 55.5 47 51.1
Gohir.A13G206400 Gossypium hirsutum HOM05D008155 ORTHO05D010411 4.2e-06 55.1 49 51.0
Thecc.05G331400 Theobroma cacao HOM05D008155 ORTHO05D010411 7.2e-06 54.3 49 51.0


User provided reference genes

Program Settings