Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21266 Utricularia gibba HOM05D005900 ORTHO05D007306 1.9e-128 462.6 255 100.0
Oeu001539.2 Olea europaea HOM05D005900 ORTHO05D007306 2.4e-30 136.7 231 38.5
MSTRG.22403 Avicennia marina HOM05D005900 ORTHO05D007306 1.7e-28 130.6 229 37.6
SGA_v2.0_scaffold28G11983 Striga asiatica HOM05D005900 ORTHO05D007306 1.1e-27 127.9 229 37.6
SalBow2G0170 Salvia bowleyana HOM05D005900 ORTHO05D007306 3.3e-27 126.3 230 37.0
SGA_v2.0_scaffold154G37193 Striga asiatica HOM05D005900 ORTHO05D007306 5.6e-27 125.6 229 36.7
Oeu055297.1 Olea europaea HOM05D005900 ORTHO05D007306 1.2e-24 117.9 225 36.4
Migut.C01115 Erythranthe guttata HOM05D005900 ORTHO05D007306 2.9e-23 113.2 235 34.5
Migut.C00405 Erythranthe guttata HOM05D005900 ORTHO05D007306 3.2e-22 109.8 215 37.2
Ciclev10005823m.g Citrus clementina HOM05D005900 ORTHO05D007306 5.4e-22 109.0 157 39.5
PGSC0003DMG400008953 Solanum tuberosum HOM05D005900 ORTHO05D007306 7.9e-21 105.1 231 33.3
Sopen09g004610 Solanum pennellii HOM05D005900 ORTHO05D007306 1.0e-20 104.8 231 33.3
MBI11_g07033_MAGBIO Magnolia biondii HOM05D005900 ORTHO05D007306 1.3e-20 104.4 233 34.3
RcHm_v2.0_Chr4g0428761 Rosa chinensis HOM05D005900 ORTHO05D007306 1.3e-20 104.4 220 33.2
TWI36G0396 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 1.8e-20 104.0 223 31.8
Cc04_g15880 Coffea canephora HOM05D005900 ORTHO05D007306 3.0e-20 103.2 213 34.3
Solyc09g009850.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 3.0e-20 103.2 231 32.9
Nitab4.5_0000059g0460 Nicotiana tabacum HOM05D005900 ORTHO05D007306 3.9e-20 102.8 223 34.1
FAN07G0479 Fragaria x ananassa HOM05D005900 ORTHO05D007306 5.1e-20 102.4 224 31.7
FvH4_4g22530 Fragaria vesca HOM05D005900 ORTHO05D007306 6.7e-20 102.1 224 31.7
FAN12G4206 Fragaria x ananassa HOM05D005900 ORTHO05D007306 6.7e-20 102.1 224 31.7
FAN17G1441 Fragaria x ananassa HOM05D005900 ORTHO05D007306 8.7e-20 101.7 196 33.7
Solyc01g008760.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 8.7e-20 101.7 212 33.5
GSVIVG01001102001 Vitis vinifera HOM05D005900 ORTHO05D007306 1.1e-19 101.3 203 34.5
Atru.chr12.1436 Acer truncatum HOM05D005900 ORTHO05D007306 3.3e-19 99.8 208 34.6
Nitab4.5_0000191g0220 Nicotiana tabacum HOM05D005900 ORTHO05D007306 4.3e-19 99.4 223 33.6
PGSC0003DMG400022718 Solanum tuberosum HOM05D005900 ORTHO05D007306 9.6e-19 98.2 215 34.4
Peaxi162Scf00698g00117 Petunia axillaris HOM05D005900 ORTHO05D007306 1.6e-18 97.4 230 32.6
CSS0005312 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 2.1e-18 97.1 209 33.5
Potri.001G068500 Populus trichocarpa HOM05D005900 ORTHO05D007306 2.8e-18 96.7 192 35.4
TAR371G1211 Trochodendron aralioides HOM05D005900 ORTHO05D007306 3.7e-18 96.3 97 48.5
Sabra01G0047700 Salix brachista HOM05D005900 ORTHO05D007306 4.8e-18 95.9 219 33.3
Dinv35828 Davidia involucrata HOM05D005900 ORTHO05D007306 1.1e-17 94.7 219 33.3
CsaV3_4G033440 Cucumis sativus L. HOM05D005900 ORTHO05D007306 4.0e-17 92.8 218 31.2
CANSAT80G1963 Cannabis sativa HOM05D005900 ORTHO05D007306 5.3e-17 92.4 224 32.1
DCAR_030841 Daucus carota HOM05D005900 ORTHO05D007306 5.3e-17 92.4 210 31.0
Sed0015511 Sechium edule HOM05D005900 ORTHO05D007306 1.2e-16 91.3 208 34.6
ClCG11G017800 Citrullus lanatus HOM05D005900 ORTHO05D007306 2.0e-16 90.5 219 32.0
TAR629G1598 Trochodendron aralioides HOM05D005900 ORTHO05D007306 2.0e-16 90.5 217 31.3
PGR102G3094 Punica granatum HOM05D005900 ORTHO05D007306 5.8e-16 89.0 89 50.6
CANSAT80G1771 Cannabis sativa HOM05D005900 ORTHO05D007306 7.6e-16 88.6 224 31.7
Dinv16498 Davidia involucrata HOM05D005900 ORTHO05D007306 1.7e-15 87.4 198 33.3
Lsat_1_v5_gn_2_95001 Lactuca sativa HOM05D005900 ORTHO05D007306 1.7e-15 87.4 90 50.0
PSO170G6181 Papaver somniferum HOM05D005900 ORTHO05D007306 1.7e-15 87.4 187 31.0
Hma1.2p1_1494F.1_g286930 Hydrangea macrophylla HOM05D005900 ORTHO05D007306 2.9e-15 86.7 148 34.5
QL03p048972 Quercus lobata HOM05D005900 ORTHO05D007306 4.9e-15 85.9 215 30.7
Peaxi162Scf00079g01513 Petunia axillaris HOM05D005900 ORTHO05D007306 8.4e-15 85.1 209 31.1
Eucgr.E01503 Eucalyptus grandis HOM05D005900 ORTHO05D007306 1.9e-14 84.0 193 32.1
Thecc.02G191100 Theobroma cacao HOM05D005900 ORTHO05D007306 4.2e-14 82.8 215 30.7
Hund20854 Selenicereus undatus HOM05D005900 ORTHO05D007306 7.1e-14 82.0 214 29.0
Eucgr.B02910 Eucalyptus grandis HOM05D005900 ORTHO05D007306 9.3e-14 81.6 222 29.3
Sc06g0007790 Simmondsia chinensis HOM05D005900 ORTHO05D007306 1.2e-13 81.3 97 42.3
PSO017G3279 Papaver somniferum HOM05D005900 ORTHO05D007306 1.6e-13 80.9 210 30.5
EL10Ac1g01696 Beta vulgaris HOM05D005900 ORTHO05D007306 2.1e-13 80.5 182 31.9
Manes.08G100300 Manihot esculenta HOM05D005900 ORTHO05D007306 2.1e-13 80.5 63 58.7
COL.COLO4_27171 Corchorus olitorius HOM05D005900 ORTHO05D007306 3.5e-13 79.7 217 29.5
Rhsim12G0016500 Rhododendron simsii HOM05D005900 ORTHO05D007306 4.6e-13 79.3 201 32.8
AUR62025013 Chenopodium quinoa HOM05D005900 ORTHO05D007306 6.0e-13 79.0 207 29.5
Cc04_g15860 Coffea canephora HOM05D005900 ORTHO05D007306 6.0e-13 79.0 84 47.6
Cpa.g.sc36.199 Carica papaya HOM05D005900 ORTHO05D007306 7.9e-13 78.6 213 28.2
CDE09G0879 Ceratophyllum demersum HOM05D005900 ORTHO05D007306 7.9e-13 78.6 89 42.7
Atru.chr12.1335 Acer truncatum HOM05D005900 ORTHO05D007306 1.0e-12 78.2 68 52.9
Os08g0422600 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 1.0e-12 78.2 93 41.9
Os01g0259900 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 1.3e-12 77.8 90 43.3
AUR62006518 Chenopodium quinoa HOM05D005900 ORTHO05D007306 1.8e-12 77.4 216 28.2
arahy.Tifrunner.gnm1.ann1.UQH0GN Arachis hypogaea HOM05D005900 ORTHO05D007306 2.3e-12 77.0 167 29.9
Ca_13890_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 3.9e-12 76.3 92 42.4
Lalb_Chr15g0079851 Lupinus albus HOM05D005900 ORTHO05D007306 5.1e-12 75.9 208 30.8
Prupe.1G213900 Prunus persica HOM05D005900 ORTHO05D007306 5.1e-12 75.9 195 29.2
CiPaw.03G184600 Carya illinoinensis HOM05D005900 ORTHO05D007306 6.7e-12 75.5 217 27.6
Gohir.A01G020300 Gossypium hirsutum HOM05D005900 ORTHO05D007306 1.1e-11 74.7 224 29.9
CiPaw.05G100400 Carya illinoinensis HOM05D005900 ORTHO05D007306 1.5e-11 74.3 229 27.9
THA.LOC104799437 Tarenaya hassleriana HOM05D005900 ORTHO05D007306 1.9e-11 73.9 175 30.9
Ca_13888_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 3.3e-11 73.2 224 28.1
Zm00001eb127900 Zea mays HOM05D005900 ORTHO05D007306 4.3e-11 72.8 215 27.9
TWI18G0365 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 7.4e-11 72.0 221 28.5
ECA238G4295 Erigeron canadensis HOM05D005900 ORTHO05D007306 1.6e-10 70.9 232 29.7
vmacro15379 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 1.6e-10 70.9 261 30.3
Gorai.002G021100 Gossypium raimondii HOM05D005900 ORTHO05D007306 3.7e-10 69.7 219 27.4
BcaC08g46818 Brassica carinata HOM05D005900 ORTHO05D007306 4.8e-10 69.3 185 28.6
Gohir.D01G018900 Gossypium hirsutum HOM05D005900 ORTHO05D007306 4.8e-10 69.3 216 29.2
MD16G1142000 Malus domestica HOM05D005900 ORTHO05D007306 4.8e-10 69.3 172 28.5
Psat4g204640 Pisum sativum HOM05D005900 ORTHO05D007306 8.2e-10 68.6 221 26.2
C02p63500 Brassica napus HOM05D005900 ORTHO05D007306 1.1e-09 68.2 217 26.7
Duzib052G0736 Durio zibethinus HOM05D005900 ORTHO05D007306 1.8e-09 67.4 69 44.9
BolC6t39862H Brassica oleracea HOM05D005900 ORTHO05D007306 2.4e-09 67.0 204 27.9
BraA02t09265Z Brassica rapa HOM05D005900 ORTHO05D007306 2.4e-09 67.0 232 29.7
Ca_23210_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 3.1e-09 66.6 222 26.6
Aa31LG1G17260 Aethionema arabicum HOM05D005900 ORTHO05D007306 5.3e-09 65.9 231 25.5
BcaC03g18270 Brassica carinata HOM05D005900 ORTHO05D007306 6.9e-09 65.5 217 25.8
A02p43400 Brassica napus HOM05D005900 ORTHO05D007306 6.9e-09 65.5 232 29.3
SEGI_10970 Sequoiadendron giganteum HOM05D005900 ORTHO05D007306 6.9e-09 65.5 107 38.3
ATR0582G041 Amborella trichopoda HOM05D005900 ORTHO05D007306 1.2e-08 64.7 96 38.5
arahy.Tifrunner.gnm1.ann1.5NZU5R Arachis hypogaea HOM05D005900 ORTHO05D007306 1.2e-08 64.7 239 25.5
Sp2g27740 Schrenkiella parvula HOM05D005900 ORTHO05D007306 2.6e-08 63.5 231 27.3
BolC2t12415H Brassica oleracea HOM05D005900 ORTHO05D007306 5.8e-08 62.4 218 25.7
MD13G1131700 Malus domestica HOM05D005900 ORTHO05D007306 1.0e-07 61.6 215 27.4
vmacro01013 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 1.7e-07 60.8 277 27.4
BcaB07g29751 Brassica carinata HOM05D005900 ORTHO05D007306 2.2e-07 60.5 221 25.8
Thhalv10004934m.g Eutrema salsugineum HOM05D005900 ORTHO05D007306 2.2e-07 60.5 221 25.8
Cfa011664 Carpinus fangiana HOM05D005900 ORTHO05D007306 3.8e-07 59.7 233 27.0
Glyma.07G200400 Glycine max HOM05D005900 ORTHO05D007306 6.5e-07 58.9 100 38.0
Lj3g0021746 Lotus japonicus HOM05D005900 ORTHO05D007306 6.5e-07 58.9 243 28.4
Medtr8g012410 Medicago truncatula HOM05D005900 ORTHO05D007306 1.1e-06 58.2 217 24.0
C03p61480 Brassica napus HOM05D005900 ORTHO05D007306 1.4e-06 57.8 220 24.5
Cfa010215 Carpinus fangiana HOM05D005900 ORTHO05D007306 1.4e-06 57.8 233 27.5
TPR.G16445 Trifolium pratense HOM05D005900 ORTHO05D007306 4.2e-06 56.2 196 22.4


User provided reference genes

Program Settings