Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21237 Utricularia gibba HOM05D005972 ORTHO05D007548 1.4e-207 726.1 374 100.0
MSTRG.27825 Avicennia marina HOM05D005972 ORTHO05D007548 1.9e-111 406.8 408 56.1
Migut.N01012 Erythranthe guttata HOM05D005972 ORTHO05D007548 3.9e-109 399.1 410 55.6
SGA_v2.0_scaffold145G36053 Striga asiatica HOM05D005972 ORTHO05D007548 1.1e-108 397.5 407 54.3
SalBow6G6672 Salvia bowleyana HOM05D005972 ORTHO05D007548 2.7e-102 376.3 456 48.2
Oeu017286.1 Olea europaea HOM05D005972 ORTHO05D007548 3.9e-101 372.5 406 52.0
Rhsim05G0111400 Rhododendron simsii HOM05D005972 ORTHO05D007548 2.4e-95 353.2 405 49.4
CSS0039579 Camellia sinensis var. sinensis HOM05D005972 ORTHO05D007548 4.2e-95 352.4 409 49.6
Manes.16G061300 Manihot esculenta HOM05D005972 ORTHO05D007548 9.2e-95 351.3 408 49.3
Gorai.N007100 Gossypium raimondii HOM05D005972 ORTHO05D007548 6.0e-94 348.6 408 47.8
Gohir.A06G170300 Gossypium hirsutum HOM05D005972 ORTHO05D007548 1.0e-93 347.8 407 47.7
Gohir.D06G178100 Gossypium hirsutum HOM05D005972 ORTHO05D007548 1.3e-93 347.4 408 47.8
Nitab4.5_0000718g0290 Nicotiana tabacum HOM05D005972 ORTHO05D007548 5.1e-93 345.5 406 47.5
Nitab4.5_0012898g0010 Nicotiana tabacum HOM05D005972 ORTHO05D007548 8.7e-93 344.7 406 47.5
TWI73G1071 Tripterygium wilfordii HOM05D005972 ORTHO05D007548 1.9e-92 343.6 409 48.2
Cfa019136 Carpinus fangiana HOM05D005972 ORTHO05D007548 2.5e-92 343.2 406 49.0
Lj9A317T77 Lonicera japonica HOM05D005972 ORTHO05D007548 5.6e-92 342.0 406 48.5
Lsat_1_v5_gn_7_80540 Lactuca sativa HOM05D005972 ORTHO05D007548 7.3e-92 341.7 404 47.8
Atru.chr12.548 Acer truncatum HOM05D005972 ORTHO05D007548 1.2e-91 340.9 402 48.8
Thecc.10G118600 Theobroma cacao HOM05D005972 ORTHO05D007548 2.8e-91 339.7 408 47.1
MD13G1062400 Malus domestica HOM05D005972 ORTHO05D007548 4.7e-91 339.0 406 48.3
Sopen11g002990 Solanum pennellii HOM05D005972 ORTHO05D007548 6.2e-91 338.6 406 47.8
Lalb_Chr12g0208521 Lupinus albus HOM05D005972 ORTHO05D007548 8.1e-91 338.2 408 48.8
Prupe.1G287600 Prunus persica HOM05D005972 ORTHO05D007548 1.1e-90 337.8 404 47.8
CAN.G1513.3 Capsicum annuum HOM05D005972 ORTHO05D007548 1.4e-90 337.4 407 47.2
Thecc.04G023500 Theobroma cacao HOM05D005972 ORTHO05D007548 5.3e-90 335.5 408 47.1
Lj4g0025997 Lotus japonicus HOM05D005972 ORTHO05D007548 6.9e-90 335.1 407 47.4
Cpa.g.sc36.20 Carica papaya HOM05D005972 ORTHO05D007548 9.0e-90 334.7 406 47.8
HanXRQChr11g0337671 Helianthus annuus HOM05D005972 ORTHO05D007548 9.0e-90 334.7 404 46.8
Solyc11g007070.2 Solanum lycopersicum HOM05D005972 ORTHO05D007548 9.0e-90 334.7 406 47.0
arahy.Tifrunner.gnm1.ann1.41EE5L Arachis hypogaea HOM05D005972 ORTHO05D007548 9.9e-89 331.3 410 47.1
arahy.Tifrunner.gnm1.ann1.UKM804 Arachis hypogaea HOM05D005972 ORTHO05D007548 1.7e-88 330.5 410 47.1
COL.COLO4_27930 Corchorus olitorius HOM05D005972 ORTHO05D007548 2.2e-88 330.1 410 46.8
Duzib106G0263 Durio zibethinus HOM05D005972 ORTHO05D007548 2.2e-88 330.1 407 45.5
Eucgr.H00021 Eucalyptus grandis HOM05D005972 ORTHO05D007548 2.9e-88 329.7 410 46.6
Nn6g35524 Nelumbo nucifera HOM05D005972 ORTHO05D007548 3.8e-88 329.3 373 46.9
vmacro19910 Vaccinium macrocarpon HOM05D005972 ORTHO05D007548 3.8e-88 329.3 407 47.7
RcHm_v2.0_Chr4g0438261 Rosa chinensis HOM05D005972 ORTHO05D007548 6.4e-88 328.6 406 47.8
CiPaw.11G025800 Carya illinoinensis HOM05D005972 ORTHO05D007548 8.4e-88 328.2 406 46.8
Ca_18332_v3 Cicer arietinum L. HOM05D005972 ORTHO05D007548 8.4e-88 328.2 406 47.5
Ciclev10031864m.g Citrus clementina HOM05D005972 ORTHO05D007548 8.4e-88 328.2 399 48.1
Dinv24228 Davidia involucrata HOM05D001691 ORTHO05D007548 1.1e-87 327.8 391 48.8
GSVIVG01020853001 Vitis vinifera HOM05D005972 ORTHO05D007548 1.1e-87 327.8 405 46.7
Psat0s2194g0120 Pisum sativum HOM05D005972 ORTHO05D007548 1.9e-87 327.0 405 46.9
TPR.G31487 Trifolium pratense HOM05D005972 ORTHO05D007548 5.4e-87 325.5 407 47.7
Haze_07503 Corylus avellana HOM05D005972 ORTHO05D007548 7.1e-87 325.1 390 48.2
Actinidia28072 Actinidia chinensis HOM05D005972 ORTHO05D007548 2.3e-85 320.1 405 45.7
Ah.12g057320 Amaranthus hybridus HOM05D005972 ORTHO05D007548 3.0e-85 319.7 408 45.3
FvH4_4g29980 Fragaria vesca HOM05D005972 ORTHO05D007548 6.6e-85 318.5 406 46.3
Glyma.05G120600 Glycine max HOM05D005972 ORTHO05D007548 8.7e-85 318.2 408 45.3
FAN12G3642 Fragaria x ananassa HOM05D005972 ORTHO05D007548 1.1e-84 317.8 406 46.3
FAN07G1127 Fragaria x ananassa HOM05D005972 ORTHO05D007548 1.5e-84 317.4 406 45.8
FAN22G0246 Fragaria x ananassa HOM05D005972 ORTHO05D007548 5.6e-84 315.5 406 46.1
THA.LOC104808523 Tarenaya hassleriana HOM05D005972 ORTHO05D007548 7.3e-84 315.1 404 45.0
Potri.001G222400 Populus trichocarpa HOM05D005972 ORTHO05D007548 9.6e-84 314.7 405 45.2
AL7G40820 Arabidopsis lyrata HOM05D005972 ORTHO05D007548 2.8e-83 313.2 406 44.8
CANSAT80G0182 Cannabis sativa HOM05D005972 ORTHO05D007548 2.8e-83 313.2 404 44.3
Thhalv10025456m.g Eutrema salsugineum HOM05D005972 ORTHO05D007548 8.1e-83 311.6 410 43.7
Medtr4g094305 Medicago truncatula HOM05D005972 ORTHO05D007548 1.4e-82 310.8 406 45.6
EL10Ac5g12767 Beta vulgaris HOM05D005972 ORTHO05D007548 1.8e-82 310.5 411 45.5
AT4G15010 Arabidopsis thaliana HOM05D005972 ORTHO05D007548 2.4e-82 310.1 404 43.6
VMungo0251G2526 Vigna mungo HOM05D005972 ORTHO05D007548 3.1e-82 309.7 410 44.1
Sc22g0000350 Simmondsia chinensis HOM05D005972 ORTHO05D007548 4.0e-82 309.3 408 45.3
ClCG05G021510 Citrullus lanatus HOM05D005972 ORTHO05D007548 5.3e-82 308.9 408 44.6
CARHR221700 Cardamine hirsuta HOM05D005972 ORTHO05D007548 6.9e-82 308.5 407 42.8
FAN17G2742 Fragaria x ananassa HOM05D005972 ORTHO05D007548 1.2e-81 307.8 419 44.4
Carub.0007s2708 Capsella rubella HOM05D005972 ORTHO05D007548 2.0e-81 307.0 404 43.3
Sed0010539 Sechium edule HOM05D005972 ORTHO05D007548 2.6e-81 306.6 408 44.1
PGR142G0064 Punica granatum HOM05D005972 ORTHO05D007548 5.8e-81 305.4 407 44.2
Aa31LG9G2330 Aethionema arabicum HOM05D005972 ORTHO05D007548 3.8e-80 302.8 406 43.6
BcaC09g50180 Brassica carinata HOM05D005972 ORTHO05D007548 4.9e-80 302.4 405 42.7
BolC1t02740H Brassica oleracea HOM05D005972 ORTHO05D007548 4.9e-80 302.4 405 42.7
Glyma.08G075400 Glycine max HOM05D005972 ORTHO05D007548 4.9e-80 302.4 408 43.9
PSO782G4197 Papaver somniferum HOM05D005972 ORTHO05D007548 8.4e-80 301.6 403 42.2
BraA01t02169Z Brassica rapa HOM05D005972 ORTHO05D007548 1.1e-79 301.2 405 42.5
PSO063G2120 Papaver somniferum HOM05D005972 ORTHO05D007548 1.1e-79 301.2 403 42.2
BcaNung00313 Brassica carinata HOM05D005972 ORTHO05D007548 1.9e-79 300.4 405 43.0
QL04p050517 Quercus lobata HOM05D005972 ORTHO05D007548 3.2e-79 299.7 318 52.2
A01p22560 Brassica napus HOM05D005972 ORTHO05D007548 7.1e-79 298.5 405 42.2
C01p28060 Brassica napus HOM05D005972 ORTHO05D007548 1.6e-78 297.4 405 42.0
BcaB02g07844 Brassica carinata HOM05D005972 ORTHO05D007548 2.7e-78 296.6 406 42.4
Aqoxy4G02449 Aquilegia oxysepala HOM05D005972 ORTHO05D007548 7.9e-78 295.0 434 41.5
CsaV3_5G035730 Cucumis sativus L. HOM05D005972 ORTHO05D007548 7.9e-78 295.0 408 42.6
MELO3C012375.2 Cucumis melo HOM05D005972 ORTHO05D007548 1.3e-77 294.3 408 42.6
Phvul.002G206200 Phaseolus vulgaris HOM05D005972 ORTHO05D007548 1.3e-75 287.7 408 44.1
CDE04G1870 Ceratophyllum demersum HOM05D005972 ORTHO05D007548 3.7e-75 286.2 407 41.0
MD16G1060700 Malus domestica HOM05D005972 ORTHO05D007548 6.2e-75 285.4 383 44.6
Peaxi162Scf00152g01221 Petunia axillaris HOM05D005972 ORTHO05D007548 3.1e-74 283.1 375 44.0
ECA236G4176 Erigeron canadensis HOM05D005972 ORTHO05D007548 2.9e-72 276.6 294 49.3
HPP92_021056 Vanilla planifolia HOM05D005972 ORTHO05D007548 2.9e-72 276.6 400 40.2
MBI03_g03956_MAGBIO Magnolia biondii HOM05D005972 ORTHO05D007548 1.4e-71 274.2 388 40.5
ATR0594G009 Amborella trichopoda HOM05D005972 ORTHO05D007548 1.2e-70 271.2 403 40.7
ATR0174G007 Amborella trichopoda HOM05D005972 ORTHO05D007548 7.4e-68 261.9 415 40.0
DCAR_006139 Daucus carota HOM05D005972 ORTHO05D007548 4.8e-67 259.2 322 46.9
SHI11404 Sapria himalayana HOM05D005972 ORTHO05D007548 9.7e-60 235.0 309 45.6
SEGI_29488 Sequoiadendron giganteum HOM05D005972 ORTHO05D007548 7.7e-57 225.3 407 33.4
Zm00001eb427070 Zea mays HOM05D005972 ORTHO05D007548 5.5e-55 219.2 399 36.1
Sabra16G0132100 Salix brachista HOM05D005972 ORTHO05D007548 9.4e-55 218.4 269 44.2
Cc02_g21900 Coffea canephora HOM05D005972 ORTHO05D007548 7.7e-49 198.7 218 50.0
Mapoly0188s0014 Marchantia polymorpha HOM05D005972 ORTHO05D007548 1.5e-44 184.5 404 34.2
COL.COLO4_10011 Corchorus olitorius HOM05D005972 ORTHO05D007548 1.4e-42 177.9 302 38.7
Pp3c15_20500 Physcomitrium patens HOM05D005972 ORTHO05D007548 2.6e-33 147.1 404 27.2
Sp7g13170 Schrenkiella parvula HOM05D005972 ORTHO05D007548 3.0e-29 133.7 192 40.6
C06p16620 Brassica napus HOM05D005972 ORTHO05D007548 7.5e-28 129.0 252 37.3
BolC6t36864H Brassica oleracea HOM05D005972 ORTHO05D007548 7.5e-28 129.0 252 37.3
Aqoxy3G01225 Aquilegia oxysepala HOM05D005972 ORTHO05D007548 5.9e-25 119.4 141 44.0
SpUn0490_0010 Schrenkiella parvula HOM05D005972 ORTHO05D007548 2.1e-22 110.9 146 47.3
A05p16900 Brassica napus HOM05D005972 ORTHO05D007548 3.0e-21 107.1 167 40.1
BcaC08g44257 Brassica carinata HOM05D005972 ORTHO05D024007 2.4e-18 97.4 157 38.9
CAN.G730.4 Capsicum annuum HOM05D005972 ORTHO05D007548 1.7e-16 91.3 374 26.7
Os04g0527500 Oryza sativa ssp. japonica HOM05D005972 ORTHO05D007548 1.7e-16 91.3 146 38.4
CSS0032497 Camellia sinensis var. sinensis HOM05D001087 ORTHO05D007548 1.5e-15 88.2 84 57.1
BraA05t20595Z Brassica rapa HOM05D005972 ORTHO05D007548 5.5e-15 86.3 110 47.3
CAN.G730.17 Capsicum annuum HOM05D005972 ORTHO05D007548 9.8e-12 75.5 110 41.8
Cc02_g21910 Coffea canephora HOM05D005972 ORTHO05D007548 2.4e-10 70.9 64 57.8
CSS0030864 Camellia sinensis var. sinensis HOM05D000451 ORTHO05D000351 7.0e-10 69.3 71 53.5
COL.COLO4_10012 Corchorus olitorius HOM05D005972 ORTHO05D007548 1.2e-09 68.6 73 50.7
HanXRQChr15g0481161 Helianthus annuus HOM05D005972 ORTHO05D007548 1.0e-08 65.5 94 39.4
CAN.G1940.2 Capsicum annuum HOM05D005972 ORTHO05D007548 2.3e-08 64.3 51 54.9


User provided reference genes

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