Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21193 Utricularia gibba HOM05D004568 ORTHO05D005343 5.8e-175 617.5 315 100.0
Oeu033529.1 Olea europaea HOM05D004568 ORTHO05D005343 4.5e-42 176.0 337 39.2
Nitab4.5_0004681g0010 Nicotiana tabacum HOM05D004568 ORTHO05D005343 6.5e-41 172.2 354 36.4
Nitab4.5_0001554g0060 Nicotiana tabacum HOM05D004568 ORTHO05D005343 1.9e-40 170.6 353 35.4
Peaxi162Scf00208g00131 Petunia axillaris HOM05D004568 ORTHO05D005343 4.2e-40 169.5 352 35.5
SalBow8G3235 Salvia bowleyana HOM05D004568 ORTHO05D005343 6.1e-39 165.6 323 39.0
SalBow8G5572 Salvia bowleyana HOM05D004568 ORTHO05D005343 6.1e-39 165.6 323 39.0
Hma1.2p1_1424F.1_g282720 Hydrangea macrophylla HOM05D004568 ORTHO05D005343 1.8e-38 164.1 353 36.8
unitig_699.g19898 Utricularia gibba HOM05D004568 ORTHO05D005343 4.3e-37 159.5 144 61.8
Cfa008803 Carpinus fangiana HOM05D004568 ORTHO05D005343 5.9e-34 149.1 319 35.7
Cpa.g.sc1.257 Carica papaya HOM05D004568 ORTHO05D005343 7.7e-34 148.7 193 47.7
Migut.L01125 Erythranthe guttata HOM05D004568 ORTHO05D005343 7.7e-34 148.7 345 36.2
Hma1.2p1_1459F.1_g284900 Hydrangea macrophylla HOM05D004568 ORTHO05D005343 6.5e-33 145.6 341 34.9
SGA_v2.0_scaffold36G14507 Striga asiatica HOM05D004568 ORTHO05D005343 3.2e-32 143.3 209 44.0
Sabra08G0083400 Salix brachista HOM05D004568 ORTHO05D005343 4.7e-31 139.4 360 33.1
QL03p044380 Quercus lobata HOM05D004568 ORTHO05D005343 7.9e-31 138.7 324 36.1
TWI75G0122 Tripterygium wilfordii HOM05D004568 ORTHO05D005343 1.0e-30 138.3 364 34.9
TWI79G0507 Tripterygium wilfordii HOM05D004568 ORTHO05D005343 1.0e-30 138.3 364 32.7
SGA_v2.0_scaffold16G07859 Striga asiatica HOM05D004568 ORTHO05D005343 1.4e-30 137.9 335 35.2
GSVIVG01012027001 Vitis vinifera HOM05D004568 ORTHO05D005343 3.0e-30 136.7 188 48.9
CiPaw.05G118300 Carya illinoinensis HOM05D004568 ORTHO05D005343 6.7e-30 135.6 396 31.1
Thecc.02G315200 Theobroma cacao HOM05D004568 ORTHO05D005343 1.1e-29 134.8 192 45.3
Lj2g0022626 Lotus japonicus HOM05D004568 ORTHO05D005343 1.5e-29 134.4 375 33.9
CANSAT64G0418 Cannabis sativa HOM05D004568 ORTHO05D005343 3.3e-29 133.3 192 45.3
Sc04g0007050 Simmondsia chinensis HOM05D004568 ORTHO05D005343 9.7e-29 131.7 345 31.3
Atru.chr11.1442 Acer truncatum HOM05D004568 ORTHO05D005343 2.2e-28 130.6 210 42.4
Atru.chr11.1472 Acer truncatum HOM05D004568 ORTHO05D005343 2.2e-28 130.6 210 42.4
CSS0045744 Camellia sinensis var. sinensis HOM05D004568 ORTHO05D005343 3.7e-28 129.8 347 32.6
Dinv16554 Davidia involucrata HOM05D004568 ORTHO05D005343 3.7e-28 129.8 300 35.0
MD16G1057700 Malus domestica HOM05D004568 ORTHO05D005343 8.2e-28 128.6 234 41.9
Solyc04g005920.1 Solanum lycopersicum HOM05D004568 ORTHO05D005343 1.4e-27 127.9 325 32.6
Sed0022479 Sechium edule HOM05D004568 ORTHO05D005343 1.2e-26 124.8 369 31.7
VMungo1215G2036 Vigna mungo HOM05D004568 ORTHO05D005343 3.4e-26 123.2 381 28.6
Sopen04g001970 Solanum pennellii HOM05D004568 ORTHO05D005343 4.5e-26 122.9 325 32.3
CSS0002717 Camellia sinensis var. sinensis HOM05D004568 ORTHO05D005343 5.9e-26 122.5 336 32.1
Lalb_Chr10g0099511 Lupinus albus HOM05D004568 ORTHO05D005343 7.7e-26 122.1 283 32.9
COL.COLO4_27716 Corchorus olitorius HOM05D004568 ORTHO05D005343 1.0e-25 121.7 388 29.9
TWI31G1373 Tripterygium wilfordii HOM05D004568 ORTHO05D005343 1.0e-25 121.7 320 32.5
Thecc.09G210800 Theobroma cacao HOM05D004568 ORTHO05D005343 1.7e-25 120.9 193 43.5
MD13G1052200 Malus domestica HOM05D004568 ORTHO05D005343 3.8e-25 119.8 387 34.1
Potri.008G109600 Populus trichocarpa HOM05D004568 ORTHO05D005343 1.4e-24 117.9 381 27.8
Gohir.D12G160800 Gossypium hirsutum HOM05D004568 ORTHO05D005343 1.9e-24 117.5 338 31.7
Manes.06G076600 Manihot esculenta HOM05D004568 ORTHO05D005343 2.5e-24 117.1 369 30.1
Gohir.A12G157850 Gossypium hirsutum HOM05D004568 ORTHO05D005343 3.2e-24 116.7 340 32.1
Gohir.A12G157951 Gossypium hirsutum HOM05D004568 ORTHO05D005343 3.2e-24 116.7 340 32.1
Potri.T062072 Populus trichocarpa HOM05D004568 ORTHO05D005343 4.2e-24 116.3 381 27.6
Prupe.1G299900 Prunus persica HOM05D004568 ORTHO05D005343 4.2e-24 116.3 352 32.4
CiPaw.06G097400 Carya illinoinensis HOM05D004568 ORTHO05D005343 5.5e-24 115.9 188 43.6
TAR374G1393 Trochodendron aralioides HOM05D004568 ORTHO05D005343 1.2e-23 114.8 357 31.1
Potri.010G133600 Populus trichocarpa HOM05D004568 ORTHO05D005343 1.6e-23 114.4 383 28.7
COL.COLO4_34999 Corchorus olitorius HOM05D004568 ORTHO05D005343 2.7e-23 113.6 321 29.6
Gorai.008G173800 Gossypium raimondii HOM05D004568 ORTHO05D005343 8.0e-23 112.1 342 31.0
Sabra10G0102200 Salix brachista HOM05D004568 ORTHO05D005343 1.0e-22 111.7 203 37.9
PGSC0003DMG400002843 Solanum tuberosum HOM05D004568 ORTHO05D005343 1.8e-22 110.9 335 31.3
Duzib168G1705 Durio zibethinus HOM05D004568 ORTHO05D005343 2.3e-22 110.5 194 41.2
HanXRQChr12g0365221 Helianthus annuus HOM05D004568 ORTHO05D005343 2.3e-22 110.5 339 33.0
ClCG05G023290 Citrullus lanatus HOM05D004568 ORTHO05D005343 5.2e-22 109.4 304 32.6
CsaV3_5G033720 Cucumis sativus L. HOM05D004568 ORTHO05D005343 6.7e-22 109.0 305 30.8
FAN07G0048 Fragaria x ananassa HOM05D004568 ORTHO05D005343 8.8e-22 108.6 330 31.5
Manes.14G094400 Manihot esculenta HOM05D004568 ORTHO05D005343 8.8e-22 108.6 373 30.0
Actinidia37881 Actinidia chinensis HOM05D004568 ORTHO05D005343 1.5e-21 107.8 258 34.9
DCAR_030135 Daucus carota HOM05D004568 ORTHO05D005343 1.5e-21 107.8 314 32.8
MELO3C012188.2 Cucumis melo HOM05D004568 ORTHO05D005343 2.0e-21 107.5 312 30.8
Duzib251G0342 Durio zibethinus HOM05D004568 ORTHO05D005343 3.3e-21 106.7 193 38.9
FAN12G0798 Fragaria x ananassa HOM05D004568 ORTHO05D005343 3.3e-21 106.7 338 30.8
FvH4_4g28580 Fragaria vesca HOM05D004568 ORTHO05D005343 4.4e-21 106.3 338 30.8
FAN22G1274 Fragaria x ananassa HOM05D004568 ORTHO05D005343 5.7e-21 105.9 338 30.8
HanXRQChr08g0214641 Helianthus annuus HOM05D004568 ORTHO05D005343 5.7e-21 105.9 346 30.6
HanXRQChr08g0214671 Helianthus annuus HOM05D004568 ORTHO05D005343 5.7e-21 105.9 346 30.6
Nn3g17622 Nelumbo nucifera HOM05D004568 ORTHO05D005343 5.7e-21 105.9 274 33.6
Gohir.D13G217400 Gossypium hirsutum HOM05D004568 ORTHO05D005343 7.4e-21 105.5 367 31.6
Gorai.013G247900 Gossypium raimondii HOM05D004568 ORTHO05D005343 7.4e-21 105.5 367 31.6
Duzib268G1242 Durio zibethinus HOM05D004568 ORTHO05D005343 1.3e-20 104.8 192 39.6
Lsat_1_v5_gn_3_58841 Lactuca sativa HOM05D004568 ORTHO05D005343 1.3e-20 104.8 341 31.1
FAN17G1809 Fragaria x ananassa HOM05D004568 ORTHO05D005343 2.2e-20 104.0 337 30.3
DCAR_026699 Daucus carota HOM05D004568 ORTHO05D005343 1.1e-19 101.7 363 32.5
TPR.G2653 Trifolium pratense HOM05D004568 ORTHO05D005343 1.1e-19 101.7 220 34.1
Gorai.005G149300 Gossypium raimondii HOM05D004568 ORTHO05D005343 1.4e-19 101.3 197 38.1
RcHm_v2.0_Chr4g0436671 Rosa chinensis HOM05D004568 ORTHO05D005343 1.4e-19 101.3 334 30.5
BcaC04g21427 Brassica carinata HOM05D004568 ORTHO05D005343 2.4e-19 100.5 195 37.9
BcaC04g21428 Brassica carinata HOM05D004568 ORTHO05D005343 2.4e-19 100.5 195 37.9
BolC2t11302H Brassica oleracea HOM05D004568 ORTHO05D005343 3.1e-19 100.1 205 38.5
Gohir.A03G108200 Gossypium hirsutum HOM05D004568 ORTHO05D005343 3.1e-19 100.1 196 37.8
CDE04G2972 Ceratophyllum demersum HOM05D004568 ORTHO05D005343 7.0e-19 99.0 200 32.0
Haze_11819 Corylus avellana HOM05D004568 ORTHO05D005343 7.0e-19 99.0 119 47.1
Gohir.D02G133400 Gossypium hirsutum HOM05D004568 ORTHO05D005343 7.0e-19 99.0 197 37.1
PGSC0003DMG400007516 Solanum tuberosum HOM05D004568 ORTHO05D005343 7.0e-19 99.0 324 29.6
Eucgr.G02393 Eucalyptus grandis HOM05D004568 ORTHO05D005343 9.1e-19 98.6 223 35.9
Cc11_g11080 Coffea canephora HOM05D004568 ORTHO05D005343 1.2e-18 98.2 326 28.8
HanXRQChr17g0551111 Helianthus annuus HOM05D004568 ORTHO05D005343 1.2e-18 98.2 334 29.0
HanXRQChr17g0551511 Helianthus annuus HOM05D004568 ORTHO05D005343 1.2e-18 98.2 334 29.0
Glyma.02G128700 Glycine max HOM05D004568 ORTHO05D005343 1.6e-18 97.8 225 32.4
Medtr6g472100 Medicago truncatula HOM05D004568 ORTHO05D005343 1.6e-18 97.8 365 29.9
EL10Ac6g14584 Beta vulgaris HOM05D004568 ORTHO05D005343 2.6e-18 97.1 241 33.2
ECA246G3306 Erigeron canadensis HOM05D004568 ORTHO05D005343 2.6e-18 97.1 329 30.4
Solyc05g010450.1 Solanum lycopersicum HOM05D004568 ORTHO05D005343 2.6e-18 97.1 323 31.0
Sopen05g006240 Solanum pennellii HOM05D004568 ORTHO05D005343 2.6e-18 97.1 323 31.0
AUR62039200 Chenopodium quinoa HOM05D004568 ORTHO05D005343 3.5e-18 96.7 359 30.1
BcaC03g17273 Brassica carinata HOM05D004568 ORTHO05D005343 4.5e-18 96.3 190 37.9
BraA06t27185Z Brassica rapa HOM05D004568 ORTHO05D005343 5.9e-18 95.9 189 39.2
A06p42720 Brassica napus HOM05D004568 ORTHO05D005343 1.0e-17 95.1 192 38.5
PGR119G0824 Punica granatum HOM05D004568 ORTHO05D005343 1.3e-17 94.7 209 34.4
AT3G25590 Arabidopsis thaliana HOM05D004568 ORTHO05D005343 1.7e-17 94.4 208 38.9
arahy.Tifrunner.gnm1.ann1.35X7C5 Arachis hypogaea HOM05D004568 ORTHO05D005343 1.7e-17 94.4 334 28.1
A09p24900 Brassica napus HOM05D004568 ORTHO05D005343 2.9e-17 93.6 197 37.1
Glyma.04G152800 Glycine max HOM05D004568 ORTHO05D005343 5.0e-17 92.8 230 32.6
Gohir.A13G213600 Gossypium hirsutum HOM05D004568 ORTHO05D005343 1.5e-16 91.3 200 35.0
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 2.5e-16 90.5 214 40.2
BcaC06g33977 Brassica carinata HOM05D004568 ORTHO05D005343 5.5e-16 89.4 194 37.1
C07p34410 Brassica napus HOM05D004568 ORTHO05D005343 5.5e-16 89.4 194 37.1
BolC7t43969H Brassica oleracea HOM05D004568 ORTHO05D005343 5.5e-16 89.4 194 37.1
PSO063G5818 Papaver somniferum HOM05D004568 ORTHO05D005343 5.5e-16 89.4 227 37.4
Ca_05120_v3 Cicer arietinum L. HOM05D004568 ORTHO05D005343 1.2e-15 88.2 375 28.0
Phvul.003G034500 Phaseolus vulgaris HOM05D004568 ORTHO05D005343 1.2e-15 88.2 319 28.8
Psat2g096280 Pisum sativum HOM05D004568 ORTHO05D005343 2.7e-15 87.0 364 27.5
PSO782G5402 Papaver somniferum HOM05D004568 ORTHO05D005343 1.0e-14 85.1 312 31.4
BolC9t56047H Brassica oleracea HOM05D004568 ORTHO05D005343 1.4e-14 84.7 195 34.4
Aqoxy3G03818 Aquilegia oxysepala HOM05D004568 ORTHO05D005343 2.3e-14 84.0 204 35.8
arahy.Tifrunner.gnm1.ann1.Y3DNXR Arachis hypogaea HOM05D004568 ORTHO05D005343 4.0e-14 83.2 244 29.9
AUR62019434 Chenopodium quinoa HOM05D000052 ORTHO05D000046 5.2e-14 82.8 247 32.8
C09p31920 Brassica napus HOM05D004568 ORTHO05D005343 6.7e-14 82.4 195 33.8
AUR62007782 Chenopodium quinoa HOM05D004568 ORTHO05D005343 6.7e-14 82.4 365 29.0
THA.LOC104824044 Tarenaya hassleriana HOM05D004568 ORTHO05D005343 8.8e-14 82.0 214 33.2
Rhsim09G0116100 Rhododendron simsii HOM05D004568 ORTHO05D005343 1.5e-13 81.3 349 29.5
unitig_26.g10277 Utricularia gibba HOM05D004568 ORTHO05D005343 1.5e-13 81.3 318 29.9
Ciclev10033580m.g Citrus clementina HOM05D004568 ORTHO05D005343 2.6e-13 80.5 228 32.0
Rhsim09G0116400 Rhododendron simsii HOM05D004568 ORTHO05D005343 2.6e-13 80.5 350 29.4
THA.LOC104805234 Tarenaya hassleriana HOM05D004568 ORTHO05D005343 2.6e-13 80.5 208 32.7
C02p52170 Brassica napus HOM05D004568 ORTHO05D005343 3.3e-13 80.1 179 35.2
Ah.04g164810 Amaranthus hybridus HOM05D004568 ORTHO05D005343 4.4e-13 79.7 324 28.4
TAR622G0675 Trochodendron aralioides HOM05D004568 ORTHO05D005343 4.4e-13 79.7 192 35.4
BraA09t38078Z Brassica rapa HOM05D004568 ORTHO05D005343 9.7e-13 78.6 197 32.0
Nitab4.5_0012448g0010 Nicotiana tabacum HOM05D004568 ORTHO05D005343 2.2e-12 77.4 259 35.5
A02p33910 Brassica napus HOM05D004568 ORTHO05D005343 1.8e-11 74.3 202 33.7
BraA02t08408Z Brassica rapa HOM05D004568 ORTHO05D005343 1.8e-11 74.3 202 33.7
SEGI_17788 Sequoiadendron giganteum HOM05D004568 ORTHO05D005343 9.1e-11 72.0 145 33.8
Thhalv10004268m.g Eutrema salsugineum HOM05D004568 ORTHO05D005343 5.9e-10 69.3 210 31.9
AL5G14100 Arabidopsis lyrata HOM05D004568 ORTHO05D005343 1.7e-09 67.8 195 34.9
Aa31LG2G6720 Aethionema arabicum HOM05D004568 ORTHO05D005343 3.2e-08 63.5 222 29.7
CDE04G2720 Ceratophyllum demersum HOM05D004568 ORTHO05D005343 3.2e-08 63.5 124 38.7
Lsat_1_v5_gn_8_37860 Lactuca sativa HOM05D004568 ORTHO05D005343 2.7e-07 60.5 342 26.6
Actinidia30170 Actinidia chinensis HOM05D004568 ORTHO05D005343 3.6e-07 60.1 102 41.2
Sp2g14860 Schrenkiella parvula HOM05D004568 ORTHO05D005343 3.6e-07 60.1 225 30.2
vmacro10495 Vaccinium macrocarpon HOM05D004568 ORTHO05D005343 6.1e-07 59.3 348 25.9
Ah.06g195100 Amaranthus hybridus HOM05D004568 ORTHO05D005343 1.0e-06 58.5 69 50.7
BcaB07g30266 Brassica carinata HOM05D004568 ORTHO05D005343 1.4e-06 58.2 202 30.7
Carub.0005s0337 Capsella rubella HOM05D004568 ORTHO05D005343 1.8e-06 57.8 189 30.7


User provided reference genes

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