Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21169 Utricularia gibba HOM05D005917 ORTHO05D007517 1.1e-290 1002.7 519 100.0
SalBow2G0814 Salvia bowleyana HOM05D005917 ORTHO05D007517 3.4e-196 688.7 522 69.5
SGA_v2.0_scaffold302G47853 Striga asiatica HOM05D005917 ORTHO05D000086 7.8e-193 677.6 519 70.7
SalBow2G2149 Salvia bowleyana HOM05D005917 ORTHO05D007517 7.3e-191 671.0 522 68.8
MSTRG.14928 Avicennia marina HOM05D005917 ORTHO05D007517 1.2e-190 670.2 523 68.6
Migut.M00025 Erythranthe guttata HOM05D005917 ORTHO05D007517 5.8e-180 634.8 526 66.2
Oeu012341.1 Olea europaea HOM05D005917 ORTHO05D007517 2.1e-177 626.3 524 65.5
CAN.G854.3 Capsicum annuum HOM05D005917 ORTHO05D007517 2.0e-172 609.8 524 64.9
PGSC0003DMG400006133 Solanum tuberosum HOM05D005917 ORTHO05D007517 5.8e-172 608.2 529 63.9
Sopen07g024410 Solanum pennellii HOM05D005917 ORTHO05D007517 2.2e-171 606.3 529 63.7
Solyc07g047980.3 Solanum lycopersicum HOM05D005917 ORTHO05D007517 4.9e-171 605.1 527 64.1
Cc02_g11180 Coffea canephora HOM05D005917 ORTHO05D007517 4.2e-170 602.1 539 63.1
Peaxi162Scf00776g00033 Petunia axillaris HOM05D005917 ORTHO05D007517 7.1e-170 601.3 522 63.8
Nitab4.5_0005699g0010 Nicotiana tabacum HOM05D005917 ORTHO05D007517 1.3e-168 597.0 529 62.9
TWI36G1171 Tripterygium wilfordii HOM05D005917 ORTHO05D007517 8.7e-168 594.3 525 62.1
Manes.13G063400 Manihot esculenta HOM05D005917 ORTHO05D007517 1.5e-167 593.6 525 63.4
Duzib133G0758 Durio zibethinus HOM05D005917 ORTHO05D007517 1.6e-166 590.1 523 62.7
Gohir.A11G150200 Gossypium hirsutum HOM05D005917 ORTHO05D007517 1.6e-166 590.1 526 62.2
Gohir.D11G156700 Gossypium hirsutum HOM05D005917 ORTHO05D007517 2.1e-166 589.7 526 62.0
Gorai.007G167200 Gossypium raimondii HOM05D005917 ORTHO05D007517 2.1e-166 589.7 526 62.2
Thecc.01G189700 Theobroma cacao HOM05D005917 ORTHO05D007517 2.8e-166 589.3 527 62.2
Nitab4.5_0000441g0160 Nicotiana tabacum HOM05D005917 ORTHO05D007517 5.3e-165 585.1 530 62.3
Cpa.g.sc136.15 Carica papaya HOM05D005917 ORTHO05D007517 2.9e-163 579.3 526 61.4
Lalb_Chr17g0349121 Lupinus albus HOM05D005917 ORTHO05D007517 1.1e-162 577.4 527 59.0
TWI18G0259 Tripterygium wilfordii HOM05D005917 ORTHO05D007517 1.4e-162 577.0 521 61.2
COL.COLO4_33026 Corchorus olitorius HOM05D005917 ORTHO05D007517 3.2e-162 575.9 527 62.0
Ah.14g082780 Amaranthus hybridus HOM05D005917 ORTHO05D007517 7.1e-162 574.7 521 61.6
Lj1P791T65 Lonicera japonica HOM05D005917 ORTHO05D007517 9.3e-162 574.3 529 60.3
QL08p028769 Quercus lobata HOM05D005917 ORTHO05D007517 9.3e-162 574.3 526 61.2
EL10Ac9g22738 Beta vulgaris HOM05D005917 ORTHO05D007517 4.6e-161 572.0 528 61.0
Hma1.2p1_0405F.1_g145810 Hydrangea macrophylla HOM05D005917 ORTHO05D007517 4.6e-161 572.0 525 60.8
Ciclev10014942m.g Citrus clementina HOM05D005917 ORTHO05D007517 6.0e-161 571.6 523 59.8
Sc21g0000840 Simmondsia chinensis HOM05D005917 ORTHO05D007517 6.0e-161 571.6 520 61.5
CsaV3_7G002690 Cucumis sativus L. HOM05D005917 ORTHO05D007517 7.9e-161 571.2 530 60.9
Cfa014247 Carpinus fangiana HOM05D005917 ORTHO05D007517 1.0e-160 570.9 526 60.5
Eucgr.K00656 Eucalyptus grandis HOM05D005917 ORTHO05D007517 1.0e-160 570.9 525 61.1
vmacro12107 Vaccinium macrocarpon HOM05D005917 ORTHO05D007517 1.8e-160 570.1 524 61.6
PGR042G1386 Punica granatum HOM05D005917 ORTHO05D007517 3.0e-160 569.3 524 60.5
Sabra02G0169500 Salix brachista HOM05D005917 ORTHO05D007517 6.7e-160 568.2 526 60.1
ClCG02G002680 Citrullus lanatus HOM05D005917 ORTHO05D007517 8.7e-160 567.8 529 60.7
Potri.002G222100 Populus trichocarpa HOM05D005917 ORTHO05D007517 8.7e-160 567.8 529 59.5
Medtr5g097510 Medicago truncatula HOM05D005917 ORTHO05D007517 4.3e-159 565.5 520 59.4
AUR62017525 Chenopodium quinoa HOM05D005917 ORTHO05D007517 7.4e-159 564.7 521 60.8
Rhsim06G0173900 Rhododendron simsii HOM05D005917 ORTHO05D007517 7.4e-159 564.7 528 61.2
CiPaw.04G195700 Carya illinoinensis HOM05D005917 ORTHO05D007517 9.6e-159 564.3 529 59.2
Nn1g08522 Nelumbo nucifera HOM05D005917 ORTHO05D007517 2.1e-158 563.1 528 59.5
Haze_12696 Corylus avellana HOM05D005917 ORTHO05D007517 2.8e-158 562.8 516 60.3
TPR.G15058 Trifolium pratense HOM05D005917 ORTHO05D007517 2.8e-158 562.8 526 59.5
Ca_06463_v3 Cicer arietinum L. HOM05D005917 ORTHO05D007517 4.8e-158 562.0 522 59.8
Lsat_1_v5_gn_7_96161 Lactuca sativa HOM05D005917 ORTHO05D007517 4.1e-157 558.9 537 59.2
Potri.014G164200 Populus trichocarpa HOM05D005917 ORTHO05D007517 2.6e-156 556.2 532 58.3
Sed0016848 Sechium edule HOM05D005917 ORTHO05D007517 4.5e-156 555.4 529 58.8
arahy.Tifrunner.gnm1.ann1.V8M1HU Arachis hypogaea HOM05D005917 ORTHO05D007517 1.7e-155 553.5 526 58.2
PSO700G0235 Papaver somniferum HOM05D005917 ORTHO05D007517 3.8e-155 552.4 522 59.0
Thhalv10022183m.g Eutrema salsugineum HOM05D005917 ORTHO05D007517 5.0e-155 552.0 518 59.1
Aa31LG5G18370 Aethionema arabicum HOM05D005917 ORTHO05D007517 6.5e-155 551.6 529 58.8
MD09G1121500 Malus domestica HOM05D005917 ORTHO05D007517 1.1e-154 550.8 522 58.8
Psat0s736g0080 Pisum sativum HOM05D005917 ORTHO05D007517 1.1e-154 550.8 522 58.8
THA.LOC104802624 Tarenaya hassleriana HOM05D005917 ORTHO05D007517 1.4e-154 550.4 528 57.2
DCAR_019712 Daucus carota HOM05D005917 ORTHO05D007517 1.9e-154 550.1 524 58.8
Atru.chr6.3353 Acer truncatum HOM05D005917 ORTHO05D007517 4.2e-154 548.9 524 59.4
VMungo0647G1382 Vigna mungo HOM05D005917 ORTHO05D007517 4.2e-154 548.9 530 59.2
Aqoxy1G02033 Aquilegia oxysepala HOM05D005917 ORTHO05D007517 5.5e-154 548.5 529 59.2
TAR624G1058 Trochodendron aralioides HOM05D005917 ORTHO05D007517 1.2e-153 547.4 537 57.4
HanXRQChr04g0126661 Helianthus annuus HOM05D005917 ORTHO05D007517 6.1e-153 545.0 525 59.4
AUR62015069 Chenopodium quinoa HOM05D005917 ORTHO05D007517 7.9e-153 544.7 469 62.0
PSO761G0708 Papaver somniferum HOM05D005917 ORTHO05D007517 1.8e-152 543.5 522 58.0
arahy.Tifrunner.gnm1.ann1.410RPC Arachis hypogaea HOM05D005917 ORTHO05D007517 2.3e-152 543.1 519 58.0
Glyma.14G006700 Glycine max HOM05D005917 ORTHO05D007517 2.3e-152 543.1 525 58.1
Manes.12G062101 Manihot esculenta HOM05D005917 ORTHO05D007517 2.3e-152 543.1 522 59.0
Sp3g06720 Schrenkiella parvula HOM05D005917 ORTHO05D007517 2.3e-152 543.1 517 57.8
MD17G1112500 Malus domestica HOM05D005917 ORTHO05D007517 3.0e-152 542.7 522 58.0
Prupe.3G202200 Prunus persica HOM05D005917 ORTHO05D007517 3.9e-152 542.3 524 58.8
Phvul.008G286200 Phaseolus vulgaris HOM05D005917 ORTHO05D007517 5.1e-152 542.0 535 57.6
ECA236G4414 Erigeron canadensis HOM05D005917 ORTHO05D007517 1.5e-151 540.4 531 57.6
MBI16_g11554_MAGBIO Magnolia biondii HOM05D005917 ORTHO05D007517 1.9e-151 540.0 526 56.8
SHI10119 Sapria himalayana HOM05D005917 ORTHO05D007517 3.3e-151 539.3 524 58.6
LjContig00081g0012334 Lotus japonicus HOM05D005917 ORTHO05D007517 9.7e-151 537.7 524 56.5
Glyma.02G306400 Glycine max HOM05D005917 ORTHO05D007517 1.3e-150 537.3 522 57.9
HPP92_002896 Vanilla planifolia HOM05D005917 ORTHO05D007517 6.3e-150 535.0 535 57.4
CARHR082500 Cardamine hirsuta HOM05D005917 ORTHO05D007517 1.1e-149 534.3 518 57.5
BolC1t05532H Brassica oleracea HOM05D005917 ORTHO05D007517 1.8e-149 533.5 513 57.3
AL3G19160 Arabidopsis lyrata HOM05D005917 ORTHO05D007517 3.4e-148 529.3 517 58.2
AT3G07790 Arabidopsis thaliana HOM05D005917 ORTHO05D007517 3.4e-148 529.3 523 57.7
HPP92_002885 Vanilla planifolia HOM05D005917 ORTHO05D007517 7.7e-148 528.1 536 56.9
BcaC09g47947 Brassica carinata HOM05D005917 ORTHO05D007517 1.3e-147 527.3 514 57.2
FAN14G0404 Fragaria x ananassa HOM05D005917 ORTHO05D007517 5.0e-147 525.4 517 57.6
FvH4_6g41230 Fragaria vesca HOM05D005917 ORTHO05D007517 1.9e-146 523.5 517 57.4
FAN09G3123 Fragaria x ananassa HOM05D005917 ORTHO05D007517 1.9e-146 523.5 520 57.3
Dinv07857 Davidia involucrata HOM05D005917 ORTHO05D007517 5.5e-146 521.9 524 59.0
C05p59510 Brassica napus HOM05D005917 ORTHO05D007517 7.2e-146 521.5 513 57.3
FAN05G4769 Fragaria x ananassa HOM05D005917 ORTHO05D007517 2.1e-145 520.0 515 57.1
BcaC05g29571 Brassica carinata HOM05D005917 ORTHO05D007517 2.7e-145 519.6 515 57.3
Carub.0003s0737 Capsella rubella HOM05D005917 ORTHO05D007517 2.3e-144 516.5 524 55.9
BolC5t34607H Brassica oleracea HOM05D005917 ORTHO05D007517 6.7e-144 515.0 513 56.7
BraA01t04362Z Brassica rapa HOM05D005917 ORTHO05D007517 4.3e-143 512.3 516 56.0
RcHm_v2.0_Chr2g0156781 Rosa chinensis HOM05D005917 ORTHO05D007517 4.3e-143 512.3 517 56.3
Os06g0502900 Oryza sativa ssp. japonica HOM05D005917 ORTHO05D007517 3.4e-140 502.7 530 56.2
BraA05t22776Z Brassica rapa HOM05D005917 ORTHO05D007517 4.5e-140 502.3 513 55.6
A05p40430 Brassica napus HOM05D005917 ORTHO05D007517 1.0e-139 501.1 513 55.4
TAR626G1403 Trochodendron aralioides HOM05D005917 ORTHO05D007517 5.0e-139 498.8 472 58.9
FAN02G4512 Fragaria x ananassa HOM05D005917 ORTHO05D007517 1.2e-137 494.2 514 55.1
CDE02G0007 Ceratophyllum demersum HOM05D005917 ORTHO05D007517 3.6e-137 492.7 503 55.3
Actinidia09775 Actinidia chinensis HOM05D005917 ORTHO05D007517 1.3e-134 484.2 462 58.2
Zm00001eb209420 Zea mays HOM05D005917 ORTHO05D007517 1.9e-130 470.3 528 53.8
Zm00001eb403830 Zea mays HOM05D005917 ORTHO05D007517 3.2e-130 469.5 526 53.4
Zm00001eb209430 Zea mays HOM05D005917 ORTHO05D007517 1.6e-129 467.2 529 54.1
CSS0026358 Camellia sinensis var. sinensis HOM05D005917 ORTHO05D007517 2.0e-127 460.3 521 53.2
SEGI_07273 Sequoiadendron giganteum HOM05D005917 ORTHO05D007517 1.1e-122 444.5 545 50.6
GSVIVG01030044001 Vitis vinifera HOM05D005917 ORTHO05D000188 5.4e-117 425.6 491 52.7
Mapoly0016s0028 Marchantia polymorpha HOM05D005917 ORTHO05D007517 3.2e-114 416.4 539 48.2
Pp3c5_28640 Physcomitrium patens HOM05D005917 ORTHO05D007517 2.8e-110 403.3 536 48.1
ATR0665G318 Amborella trichopoda HOM05D005917 ORTHO05D007517 1.1e-109 401.4 524 49.2
Manes.12G052600 Manihot esculenta HOM05D005917 ORTHO05D007517 2.8e-105 386.7 441 51.9
SMO347G0414 Selaginella moellendorffii HOM05D005917 ORTHO05D007517 1.4e-104 384.4 521 46.4
Migut.L01336 Erythranthe guttata HOM05D005917 ORTHO05D007517 4.4e-103 379.4 516 50.2
CDE09G1298 Ceratophyllum demersum HOM05D005917 ORTHO05D007517 2.7e-100 370.2 311 62.1
CBR_g39617 Chara braunii HOM05D005917 ORTHO05D007517 7.5e-87 325.5 571 40.5
MELO3C024210.2 Cucumis melo HOM05D005917 ORTHO05D007517 9.6e-74 282.0 304 54.9
HanXRQChr11g0328131 Helianthus annuus HOM05D005917 ORTHO05D007517 9.6e-58 228.8 288 47.9
AagrBONN_evm.TU.Sc2ySwM_344.1277 Anthoceros agrestis HOM05D005917 ORTHO05D007517 1.4e-45 188.3 344 40.4
Sed0013022 Sechium edule HOM05D005917 ORTHO05D007517 1.1e-40 172.2 201 54.2
TPR.G18819 Trifolium pratense HOM05D005917 ORTHO05D007517 4.6e-28 130.2 287 35.9
Cre11.g482050 Chlamydomonas reinhardtii HOM05D005917 ORTHO05D007517 4.2e-21 107.1 470 26.6
MCO15G396 Micromonas commoda HOM05D005917 ORTHO05D007517 1.0e-19 102.4 442 27.4
Prupe.3G225800 Prunus persica HOM05D005917 ORTHO05D007517 3.9e-19 100.5 104 57.7
Manes.16G064350 Manihot esculenta HOM05D005917 ORTHO05D007517 4.8e-17 93.6 72 68.1
FAN14G5926 Fragaria x ananassa HOM05D005917 ORTHO05D007517 1.8e-16 91.7 85 55.3
CAN.G244.10 Capsicum annuum HOM05D000180 ORTHO05D000099 1.6e-12 78.6 55 65.5
Cfa024500 Carpinus fangiana HOM05D005917 ORTHO05D007517 1.0e-11 75.9 172 35.5
FAN02G4549 Fragaria x ananassa HOM05D005917 ORTHO05D007517 6.7e-11 73.2 53 60.4
Nn6g32049 Nelumbo nucifera HOM05D005917 ORTHO05D007517 9.7e-10 69.3 63 57.1
Nn6g32048 Nelumbo nucifera HOM05D005917 ORTHO05D007517 1.3e-06 58.9 81 44.4
PRCOL_00002377 Prasinoderma coloniale HOM05D005917 ORTHO05D333437 6.5e-06 56.6 343 24.8


User provided reference genes

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