Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21120 Utricularia gibba HOM05D007497 ORTHO05D009706 8.4e-304 1046.2 522 100.0
Migut.K01014 Erythranthe guttata HOM05D007497 ORTHO05D009706 1.3e-219 766.5 514 73.5
ECA233G4426 Erigeron canadensis HOM05D007497 ORTHO05D009706 4.8e-198 694.9 502 65.3
HanXRQChr12g0362231 Helianthus annuus HOM05D007497 ORTHO05D009706 6.2e-198 694.5 502 66.3
CiPaw.05G105800 Carya illinoinensis HOM05D007497 ORTHO05D009706 8.1e-198 694.1 499 68.1
FvH4_4g23250 Fragaria vesca HOM05D007497 ORTHO05D009706 6.9e-197 691.0 501 65.9
Hma1.2p1_0275F.1_g110530 Hydrangea macrophylla HOM05D007497 ORTHO05D009706 2.6e-196 689.1 499 66.3
Eucgr.H04604 Eucalyptus grandis HOM05D007497 ORTHO05D009706 5.8e-196 688.0 504 66.1
Thecc.02G199900 Theobroma cacao HOM05D007497 ORTHO05D009706 5.8e-196 688.0 496 66.7
Cfa009399 Carpinus fangiana HOM05D007497 ORTHO05D009706 7.6e-196 687.6 496 67.1
Gohir.D01G020400 Gossypium hirsutum HOM05D007497 ORTHO05D009706 6.4e-195 684.5 507 65.9
Duzib052G0992 Durio zibethinus HOM05D007497 ORTHO05D009706 8.4e-195 684.1 506 65.4
CSS0041912 Camellia sinensis var. sinensis HOM05D007497 ORTHO05D009706 1.4e-194 683.3 501 66.3
QL03p051279 Quercus lobata HOM05D007497 ORTHO05D009706 1.4e-194 683.3 498 66.5
Gorai.002G022900 Gossypium raimondii HOM05D007497 ORTHO05D009706 4.2e-194 681.8 505 65.7
Lsat_1_v5_gn_8_147300 Lactuca sativa HOM05D007497 ORTHO05D009706 7.1e-194 681.0 516 64.1
Hund06133 Selenicereus undatus HOM05D007497 ORTHO05D009706 7.1e-194 681.0 502 64.9
RcHm_v2.0_Chr4g0429611 Rosa chinensis HOM05D007497 ORTHO05D009706 9.3e-194 680.6 499 65.1
Nn4g22236 Nelumbo nucifera HOM05D007497 ORTHO05D009706 1.2e-193 680.2 500 64.8
MBI07_g24745_MAGBIO Magnolia biondii HOM05D007497 ORTHO05D009706 2.7e-193 679.1 500 65.4
CANSAT01G1986 Cannabis sativa HOM05D007497 ORTHO05D009706 3.5e-193 678.7 499 66.1
Manes.13G007600 Manihot esculenta HOM05D007497 ORTHO05D009706 4.6e-193 678.3 504 64.9
Atru.chr11.2380 Acer truncatum HOM05D007497 ORTHO05D009706 6.0e-193 677.9 499 65.7
CsaV3_4G002920 Cucumis sativus L. HOM05D007497 ORTHO05D009706 1.0e-192 677.2 499 64.5
TAR622G0177 Trochodendron aralioides HOM05D007497 ORTHO05D009706 1.8e-192 676.4 499 64.9
Prupe.1G221400 Prunus persica HOM05D007497 ORTHO05D009706 2.3e-192 676.0 498 65.9
FAN12G1328 Fragaria x ananassa HOM05D007497 ORTHO05D009706 3.0e-192 675.6 531 62.3
MD16G1124200 Malus domestica HOM05D007497 ORTHO05D009706 6.7e-192 674.5 499 65.1
PGR119G1254 Punica granatum HOM05D007497 ORTHO05D009706 1.5e-191 673.3 499 65.1
GSVIVG01000925001 Vitis vinifera HOM05D007497 ORTHO05D009706 2.5e-191 672.5 523 62.5
Sed0000705 Sechium edule HOM05D007497 ORTHO05D009706 3.3e-191 672.2 502 63.9
FAN07G1017 Fragaria x ananassa HOM05D007497 ORTHO05D009706 9.6e-191 670.6 531 61.8
Ciclev10031387m.g Citrus clementina HOM05D007497 ORTHO05D009706 2.1e-190 669.5 499 64.5
Lj5g0001280 Lotus japonicus HOM05D007497 ORTHO05D009706 3.7e-190 668.7 502 62.9
Phvul.007G001000 Phaseolus vulgaris HOM05D007497 ORTHO05D009706 1.8e-189 666.4 501 64.5
DCAR_024649 Daucus carota HOM05D007497 ORTHO05D009706 2.4e-189 666.0 500 64.6
ATR0582G029 Amborella trichopoda HOM05D007497 ORTHO05D009706 3.1e-189 665.6 501 63.7
FAN17G0169 Fragaria x ananassa HOM05D007497 ORTHO05D009706 3.1e-189 665.6 534 60.9
Lj1A600T68 Lonicera japonica HOM05D007497 ORTHO05D009706 6.9e-189 664.5 540 59.6
MSTRG.8029 Avicennia marina HOM05D007497 ORTHO05D009706 1.5e-188 663.3 451 71.2
AUR62005664 Chenopodium quinoa HOM05D007497 ORTHO05D009706 2.0e-188 662.9 501 63.5
Oeu058905.2 Olea europaea HOM05D007497 ORTHO05D009706 2.6e-188 662.5 572 59.1
Lalb_Chr21g0307731 Lupinus albus HOM05D007497 ORTHO05D009706 5.8e-188 661.4 495 64.6
VMungo0720G2254 Vigna mungo HOM05D007497 ORTHO05D009706 7.6e-188 661.0 501 64.1
Psat6g243880 Pisum sativum HOM05D007497 ORTHO05D009706 2.9e-187 659.1 498 63.7
Glyma.20G249400 Glycine max HOM05D007497 ORTHO05D009706 4.9e-187 658.3 497 63.4
Aqoxy5G03252 Aquilegia oxysepala HOM05D007497 ORTHO05D009706 1.1e-186 657.1 500 64.2
SEGI_22503 Sequoiadendron giganteum HOM05D007497 ORTHO05D009706 3.2e-186 655.6 502 63.7
TPR.G8894 Trifolium pratense HOM05D007497 ORTHO05D009706 7.1e-186 654.4 497 62.8
arahy.Tifrunner.gnm1.ann1.USIX8K Arachis hypogaea HOM05D007497 ORTHO05D009706 1.6e-185 653.3 502 62.5
PSO478G2787 Papaver somniferum HOM05D007497 ORTHO05D009706 1.8e-184 649.8 534 60.3
Peaxi162Scf00255g00215 Petunia axillaris HOM05D007497 ORTHO05D009706 8.7e-184 647.5 500 64.0
Sabra01G0043200 Salix brachista HOM05D007497 ORTHO05D009706 1.9e-183 646.4 536 59.9
vmacro01041 Vaccinium macrocarpon HOM05D007497 ORTHO05D009706 2.5e-183 646.0 586 56.8
CDE02G2130 Ceratophyllum demersum HOM05D007497 ORTHO05D009706 3.3e-183 645.6 500 62.4
Zm00001eb133110 Zea mays HOM05D007497 ORTHO05D009706 1.4e-181 640.2 495 63.6
AagrBONN_evm.TU.Sc2ySwM_117.3575 Anthoceros agrestis HOM05D007497 ORTHO05D009706 1.3e-179 633.6 494 62.6
Mapoly0028s0122 Marchantia polymorpha HOM05D007497 ORTHO05D009706 3.3e-175 619.0 497 60.2
arahy.Tifrunner.gnm1.ann1.03F5C5 Arachis hypogaea HOM05D007497 ORTHO05D009706 7.4e-175 617.8 400 71.8
MELO3C017750.2 Cucumis melo HOM05D007497 ORTHO05D009706 1.1e-173 614.0 416 70.0
SMO164G0003 Selaginella moellendorffii HOM05D007497 ORTHO05D009706 3.1e-173 612.5 508 58.9
Nitab4.5_0001771g0110 Nicotiana tabacum HOM05D007497 ORTHO05D009706 4.5e-172 608.6 514 59.9
Nitab4.5_0004878g0020 Nicotiana tabacum HOM05D007497 ORTHO05D009706 2.2e-171 606.3 502 60.6
Pp3c11_11180 Physcomitrium patens HOM05D007497 ORTHO05D009706 3.8e-171 605.5 503 59.8
Actinidia25110 Actinidia chinensis HOM05D007497 ORTHO05D009706 1.9e-170 603.2 499 61.3
SGA_v2.0_scaffold228G43249 Striga asiatica HOM05D007497 ORTHO05D009706 2.7e-169 599.4 498 61.6
Ca_11429_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 2.0e-164 583.2 446 62.3
Ca_29861_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 2.0e-164 583.2 446 62.3
Gohir.A01G021900 Gossypium hirsutum HOM05D007497 ORTHO05D009706 3.4e-164 582.4 436 65.8
AUR62028889 Chenopodium quinoa HOM05D007497 ORTHO05D009706 1.4e-162 577.0 459 61.0
Sc04g0010370 Simmondsia chinensis HOM05D007497 ORTHO05D009706 1.1e-159 567.4 509 56.6
ClCG07G015350 Citrullus lanatus HOM05D007497 ORTHO05D009706 9.1e-157 557.8 552 53.1
HPP92_024455 Vanilla planifolia HOM05D007497 ORTHO05D009706 1.1e-154 550.8 420 65.2
Cc11_g17320 Coffea canephora HOM05D007497 ORTHO05D009706 2.7e-153 546.2 361 71.5
Rhsim12G0023000 Rhododendron simsii HOM05D007497 ORTHO05D009706 8.0e-153 544.7 504 56.3
SalBow2G2186 Salvia bowleyana HOM05D007497 ORTHO05D009706 2.3e-152 543.1 365 73.7
EL10Ac6g13550 Beta vulgaris HOM05D007497 ORTHO05D009706 6.1e-145 518.5 498 53.2
Sopen01g005520 Solanum pennellii HOM05D007497 ORTHO05D009706 6.3e-142 508.4 330 72.7
Dinv11708 Davidia involucrata HOM05D007497 ORTHO05D009706 4.1e-141 505.8 361 66.8
Actinidia30617 Actinidia chinensis HOM05D007497 ORTHO05D009706 3.7e-126 456.1 410 57.8
Solyc01g009940.1 Solanum lycopersicum HOM05D007497 ORTHO05D009706 8.3e-118 428.3 268 73.5
Potri.001G060300 Populus trichocarpa HOM05D007497 ORTHO05D009706 3.3e-90 336.7 263 61.6
Pp3s30_430 Physcomitrium patens HOM05D007497 ORTHO05D009706 6.9e-64 249.2 495 31.9
Haze_12459 Corylus avellana HOM05D007497 ORTHO05D009706 2.0e-63 247.7 205 60.0
HanXRQChr12g0362241 Helianthus annuus HOM05D007497 ORTHO05D009706 1.5e-55 221.5 154 69.5
MD10G1063400 Malus domestica HOM05D007497 ORTHO05D009706 8.2e-49 199.1 235 51.5
Prupe.4G226800 Prunus persica HOM05D007497 ORTHO05D009706 2.5e-45 187.6 160 60.6
SalBow2G3560 Salvia bowleyana HOM05D007497 ORTHO05D009706 1.8e-43 181.4 156 57.7
Cre16.g679150 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D009706 1.8e-24 118.2 333 28.8
HPP92_024456 Vanilla planifolia HOM05D007497 ORTHO05D009706 1.0e-19 102.4 77 61.0
MD13G1123400 Malus domestica HOM05D007497 ORTHO05D009706 2.6e-10 71.2 72 54.2
PRCOL_00006895 Prasinoderma coloniale HOM05D007497 ORTHO05D009706 1.7e-06 58.5 350 23.1


User provided reference genes

Program Settings