Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21104 Utricularia gibba HOM05D002829 ORTHO05D003124 1.2e-140 503.1 245 100.0
unitig_699.g19969 Utricularia gibba HOM05D002829 ORTHO05D003124 8.5e-65 251.1 169 72.8
MSTRG.8064 Avicennia marina HOM05D002829 ORTHO05D003124 1.1e-40 171.0 186 47.8
MSTRG.439 Avicennia marina HOM05D002829 ORTHO05D003124 2.1e-39 166.8 172 48.8
Migut.K01135 Erythranthe guttata HOM05D002829 ORTHO05D003124 3.4e-37 159.5 158 53.2
THA.LOC104820537 Tarenaya hassleriana HOM05D002829 ORTHO05D003124 4.1e-27 125.9 182 40.7
Cfa009474 Carpinus fangiana HOM05D002829 ORTHO05D003124 5.4e-27 125.6 208 40.4
Cpa.g.sc38.55 Carica papaya HOM05D002829 ORTHO05D003124 7.1e-27 125.2 185 42.2
MBI11_g17276_MAGBIO Magnolia biondii HOM05D002829 ORTHO05D003124 1.6e-26 124.0 209 40.7
Ciclev10029923m.g Citrus clementina HOM05D002829 ORTHO05D003124 3.5e-26 122.9 190 37.4
MD16G1144900 Malus domestica HOM05D002829 ORTHO05D003124 4.6e-26 122.5 185 41.1
Thecc.01G239500 Theobroma cacao HOM05D002829 ORTHO05D003124 4.6e-26 122.5 191 40.3
Gohir.A11G059300 Gossypium hirsutum HOM05D002829 ORTHO05D003124 6.0e-26 122.1 180 41.7
Potri.003G160000 Populus trichocarpa HOM05D002829 ORTHO05D003124 1.0e-25 121.3 209 39.7
Haze_12531 Corylus avellana HOM05D002829 ORTHO05D003124 1.7e-25 120.6 199 40.2
Gorai.007G068500 Gossypium raimondii HOM05D002829 ORTHO05D003124 1.7e-25 120.6 180 41.1
CiPaw.06G111500 Carya illinoinensis HOM05D002829 ORTHO05D003124 3.0e-25 119.8 210 40.5
TAR622G0550 Trochodendron aralioides HOM05D002829 ORTHO05D003124 3.0e-25 119.8 205 39.0
Sabra01G0049600 Salix brachista HOM05D002829 ORTHO05D003124 5.1e-25 119.0 208 38.9
MD13G1134300 Malus domestica HOM05D002829 ORTHO05D003124 6.6e-25 118.6 179 40.8
Gohir.D11G063400 Gossypium hirsutum HOM05D002829 ORTHO05D003124 8.6e-25 118.2 173 41.6
ClCG10G013080 Citrullus lanatus HOM05D002829 ORTHO05D003124 1.1e-24 117.9 181 41.4
Duzib147G1098 Durio zibethinus HOM05D002829 ORTHO05D003124 1.1e-24 117.9 191 40.8
MBI07_g42014_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D010528 1.5e-24 117.5 184 39.1
FvH4_4g22140 Fragaria vesca HOM05D002829 ORTHO05D003124 2.5e-24 116.7 262 31.7
FAN12G1147 Fragaria x ananassa HOM05D002829 ORTHO05D003124 2.5e-24 116.7 262 31.7
Manes.08G099100 Manihot esculenta HOM05D002829 ORTHO05D003124 2.5e-24 116.7 206 37.9
Prupe.1G211200 Prunus persica HOM05D002829 ORTHO05D003124 2.5e-24 116.7 195 37.9
CiPaw.05G097800 Carya illinoinensis HOM05D002829 ORTHO05D003124 3.3e-24 116.3 226 37.6
PGR102G0495 Punica granatum HOM05D002829 ORTHO05D003124 4.3e-24 115.9 209 37.3
MELO3C026752.2 Cucumis melo HOM05D002829 ORTHO05D003124 5.6e-24 115.5 189 40.2
Duzib264G0406 Durio zibethinus HOM05D002829 ORTHO05D003124 7.3e-24 115.2 206 37.9
Potri.001G070700 Populus trichocarpa HOM05D002829 ORTHO05D003124 9.5e-24 114.8 193 38.3
FAN07G1465 Fragaria x ananassa HOM05D002829 ORTHO05D003124 1.2e-23 114.4 262 31.3
Oeu011726.1 Olea europaea HOM05D002829 ORTHO05D003124 2.8e-23 113.2 183 35.0
TWI18G0126 Tripterygium wilfordii HOM05D002829 ORTHO05D003124 2.8e-23 113.2 195 35.4
QL03p048302 Quercus lobata HOM05D002829 ORTHO05D003124 4.7e-23 112.5 204 37.3
Sabra03G0116300 Salix brachista HOM05D002829 ORTHO05D003124 4.7e-23 112.5 204 40.2
Eucgr.J01660 Eucalyptus grandis HOM05D002829 ORTHO05D003124 1.1e-22 111.3 197 36.5
TWI36G1156 Tripterygium wilfordii HOM05D002829 ORTHO05D003124 1.1e-22 111.3 193 34.7
FAN17G0858 Fragaria x ananassa HOM05D002829 ORTHO05D003124 3.1e-22 109.8 262 30.2
COL.COLO4_16099 Corchorus olitorius HOM05D002829 ORTHO05D003124 4.0e-22 109.4 173 39.3
Sed0018664 Sechium edule HOM05D002829 ORTHO05D003124 4.0e-22 109.4 176 39.2
HPP92_020117 Vanilla planifolia HOM05D002829 ORTHO05D003124 4.0e-22 109.4 169 40.8
ATR0582G260 Amborella trichopoda HOM05D002829 ORTHO05D003124 6.8e-22 108.6 195 36.9
Atru.chr12.1478 Acer truncatum HOM05D002829 ORTHO05D003124 1.2e-21 107.8 204 34.8
Sed0013476 Sechium edule HOM05D002829 ORTHO05D003124 1.2e-21 107.8 170 38.2
TWI75G0707 Tripterygium wilfordii HOM05D002829 ORTHO05D003124 1.2e-21 107.8 185 37.8
Thhalv10008463m.g Eutrema salsugineum HOM05D002829 ORTHO05D003124 2.0e-21 107.1 171 37.4
RcHm_v2.0_Chr4g0428381 Rosa chinensis HOM05D002829 ORTHO05D003124 2.0e-21 107.1 255 31.0
Aa31sc50G50 Aethionema arabicum HOM05D002829 ORTHO05D003124 2.2e-20 103.6 192 34.9
Carub.0001s2663 Capsella rubella HOM05D002829 ORTHO05D003124 6.4e-20 102.1 196 33.2
PSO017G0067 Papaver somniferum HOM05D002829 ORTHO05D003124 6.4e-20 102.1 223 31.4
AT1G28190 Arabidopsis thaliana HOM05D002829 ORTHO05D003124 1.1e-19 101.3 189 33.9
HanXRQChr17g0568751 Helianthus annuus HOM05D002829 ORTHO05D003124 1.9e-19 100.5 198 35.9
AL1G41730 Arabidopsis lyrata HOM05D002829 ORTHO05D003124 3.2e-19 99.8 200 33.5
CARHR027680 Cardamine hirsuta HOM05D002829 ORTHO05D003124 3.2e-19 99.8 188 34.6
CDE09G0437 Ceratophyllum demersum HOM05D002829 ORTHO05D003124 3.2e-19 99.8 186 34.9
CSS0019210 Camellia sinensis var. sinensis HOM05D002829 ORTHO05D003124 4.1e-19 99.4 226 30.5
Lsat_1_v5_gn_4_1720 Lactuca sativa HOM05D002829 ORTHO05D003124 5.4e-19 99.0 202 35.1
PSO478G2462 Papaver somniferum HOM05D002829 ORTHO05D003124 5.4e-19 99.0 213 31.5
Sp1g24380 Schrenkiella parvula HOM05D002829 ORTHO05D003124 5.4e-19 99.0 175 36.0
BcaB03g12129 Brassica carinata HOM05D002829 ORTHO05D003124 7.1e-19 98.6 194 34.5
BolC3t19731H Brassica oleracea HOM05D002829 ORTHO05D003124 9.2e-19 98.2 173 35.3
BcaC01g00013 Brassica carinata HOM05D002829 ORTHO05D003124 2.1e-18 97.1 173 33.5
C03p74800 Brassica napus HOM05D002829 ORTHO05D003124 2.1e-18 97.1 173 33.5
A08p25820 Brassica napus HOM05D002829 ORTHO05D003124 2.7e-18 96.7 175 34.9
BraA08t34537Z Brassica rapa HOM05D002829 ORTHO05D003124 2.7e-18 96.7 175 34.9
CSS0000234 Camellia sinensis var. sinensis HOM05D002829 ORTHO05D003124 2.7e-18 96.7 213 31.0
Oeu010270.1 Olea europaea HOM05D002829 ORTHO05D003124 2.7e-18 96.7 154 37.7
BcaB07g32428 Brassica carinata HOM05D002829 ORTHO05D003124 3.5e-18 96.3 190 33.2
HPP92_000320 Vanilla planifolia HOM05D002829 ORTHO05D003124 3.5e-18 96.3 176 36.9
BcaC05g26825 Brassica carinata HOM05D002829 ORTHO05D003124 6.0e-18 95.5 191 33.5
BolC5t31417H Brassica oleracea HOM05D002829 ORTHO05D003124 6.0e-18 95.5 191 33.5
C05p27000 Brassica napus HOM05D002829 ORTHO05D003124 7.8e-18 95.1 174 34.5
A09p37870 Brassica napus HOM05D002829 ORTHO05D003124 3.9e-17 92.8 195 33.3
BraA09t39299Z Brassica rapa HOM05D002829 ORTHO05D003124 3.9e-17 92.8 195 33.3
CDE02G1175 Ceratophyllum demersum HOM05D002829 ORTHO05D003124 8.7e-17 91.7 176 35.2
Zm00001eb113580 Zea mays HOM05D002829 ORTHO05D003124 1.9e-16 90.5 167 33.5
Oeu025903.1 Olea europaea HOM05D002829 ORTHO05D003124 4.7e-15 85.9 180 31.7
SEGI_29550 Sequoiadendron giganteum HOM05D002829 ORTHO05D003124 1.8e-14 84.0 189 29.6
Ciclev10016678m.g Citrus clementina HOM05D002829 ORTHO05D003124 4.0e-14 82.8 190 30.0
CSS0010856 Camellia sinensis var. sinensis HOM05D002829 ORTHO05D003124 5.2e-14 82.4 176 32.4
QL01p017384 Quercus lobata HOM05D002829 ORTHO05D003124 2.6e-13 80.1 175 33.1
Oeu039578.1 Olea europaea HOM05D002829 ORTHO05D003124 4.4e-13 79.3 173 29.5
CiPaw.14G113800 Carya illinoinensis HOM05D002829 ORTHO05D003124 5.8e-13 79.0 178 33.1
Lsat_1_v5_gn_2_33560 Lactuca sativa HOM05D002829 ORTHO05D003124 9.9e-13 78.2 180 33.3
Atru.chr3.2771 Acer truncatum HOM05D002829 ORTHO05D003124 2.2e-12 77.0 176 30.1
Manes.01G179200 Manihot esculenta HOM05D002829 ORTHO05D003124 2.2e-12 77.0 171 32.7
CiPaw.13G151500 Carya illinoinensis HOM05D002829 ORTHO05D003124 2.9e-12 76.6 168 33.9
MD11G1186400 Malus domestica HOM05D002829 ORTHO05D003124 2.9e-12 76.6 179 29.1
Nn2g14835 Nelumbo nucifera HOM05D002829 ORTHO05D003124 2.9e-12 76.6 192 29.7
Nitab4.5_0000456g0140 Nicotiana tabacum HOM05D002829 ORTHO05D003124 2.9e-12 76.6 167 31.7
RcHm_v2.0_Chr5g0050661 Rosa chinensis HOM05D002829 ORTHO05D003124 2.9e-12 76.6 145 36.6
Manes.02G139900 Manihot esculenta HOM05D002829 ORTHO05D003124 3.8e-12 76.3 173 31.8
Gohir.A07G120300 Gossypium hirsutum HOM05D002829 ORTHO05D003124 4.9e-12 75.9 167 33.5
Gohir.D07G124500 Gossypium hirsutum HOM05D002829 ORTHO05D003124 4.9e-12 75.9 167 33.5
Gorai.001G134300 Gossypium raimondii HOM05D002829 ORTHO05D003124 4.9e-12 75.9 167 33.5
Lj1P286T7 Lonicera japonica HOM05D002829 ORTHO05D003124 4.9e-12 75.9 160 34.4
Migut.D00655 Erythranthe guttata HOM05D002829 ORTHO05D003124 6.4e-12 75.5 170 30.6
Actinidia16376 Actinidia chinensis HOM05D002829 ORTHO05D003124 1.9e-11 73.9 148 33.1
SGA_v2.0_scaffold29G12253 Striga asiatica HOM05D002829 ORTHO05D003124 2.4e-11 73.6 176 33.0
HPP92_006724 Vanilla planifolia HOM05D002829 ORTHO05D003124 2.4e-11 73.6 183 28.4
COL.COLO4_06524 Corchorus olitorius HOM05D002829 ORTHO05D003124 3.2e-11 73.2 170 30.6
Peaxi162Scf00994g00001 Petunia axillaris HOM05D002829 ORTHO05D003124 4.2e-11 72.8 156 30.8
PGR102G2796 Punica granatum HOM05D002829 ORTHO05D003124 4.2e-11 72.8 197 29.9
Sp6g31300 Schrenkiella parvula HOM05D002829 ORTHO05D003124 4.2e-11 72.8 162 34.0
PGSC0003DMG400016928 Solanum tuberosum HOM05D002829 ORTHO05D003124 4.2e-11 72.8 179 28.5
DCAR_002104 Daucus carota HOM05D002829 ORTHO05D003124 5.4e-11 72.4 195 29.2
HanXRQChr14g0432431 Helianthus annuus HOM05D002829 ORTHO05D003124 5.4e-11 72.4 178 32.6
Peaxi162Scf00156g00044 Petunia axillaris HOM05D002829 ORTHO05D003124 5.4e-11 72.4 170 28.8
AT5G12340 Arabidopsis thaliana HOM05D002829 ORTHO05D003124 7.1e-11 72.0 157 31.2
BraA02t05127Z Brassica rapa HOM05D002829 ORTHO05D003124 9.3e-11 71.6 161 32.3
AL6G23140 Arabidopsis lyrata HOM05D002829 ORTHO05D003124 1.2e-10 71.2 157 31.2
Glyma.02G280100 Glycine max HOM05D002829 ORTHO05D003124 1.2e-10 71.2 177 29.4
Nn4g22068 Nelumbo nucifera HOM05D002829 ORTHO05D003124 1.2e-10 71.2 63 54.0
Nitab4.5_0000276g0100 Nicotiana tabacum HOM05D002829 ORTHO05D003124 1.2e-10 71.2 168 29.8
BcaNung03622 Brassica carinata HOM05D002829 ORTHO05D003124 1.6e-10 70.9 163 31.9
BcaNung03623 Brassica carinata HOM05D002829 ORTHO05D003124 1.6e-10 70.9 159 34.0
Nn3g16206 Nelumbo nucifera HOM05D002829 ORTHO05D003124 1.6e-10 70.9 67 50.7
Carub.0006s1085 Capsella rubella HOM05D002829 ORTHO05D003124 2.1e-10 70.5 161 31.1
Cc01_g05450 Coffea canephora HOM05D002829 ORTHO05D003124 2.1e-10 70.5 180 28.3
Sopen04g025670 Solanum pennellii HOM05D002829 ORTHO05D003124 2.1e-10 70.5 180 27.8
Potri.001G276400 Populus trichocarpa HOM05D002829 ORTHO05D003124 2.7e-10 70.1 175 30.3
Glyma.14G034700 Glycine max HOM05D002829 ORTHO05D003124 3.5e-10 69.7 176 29.0
Solyc04g057830.1 Solanum lycopersicum HOM05D002829 ORTHO05D003124 3.5e-10 69.7 180 27.2
PSO384G3239 Papaver somniferum HOM05D002829 ORTHO05D003124 4.6e-10 69.3 182 25.8
Peaxi162Scf00741g00031 Petunia axillaris HOM05D002829 ORTHO05D003124 4.6e-10 69.3 156 30.1
A02p01480 Brassica napus HOM05D002829 ORTHO05D003124 6.0e-10 68.9 161 31.7
FAN16G1561 Fragaria x ananassa HOM05D002829 ORTHO05D003124 6.0e-10 68.9 152 32.2
ATR0745G071 Amborella trichopoda HOM05D002829 ORTHO05D003124 7.8e-10 68.6 142 34.5
A10p25480 Brassica napus HOM05D002829 ORTHO05D003124 7.8e-10 68.6 159 32.7
C09p64560 Brassica napus HOM05D002829 ORTHO05D003124 7.8e-10 68.6 159 32.7
BolC9t59289H Brassica oleracea HOM05D002829 ORTHO05D003124 7.8e-10 68.6 159 32.7
BraA10t44612Z Brassica rapa HOM05D002829 ORTHO05D003124 7.8e-10 68.6 159 32.7
FAN21G1998 Fragaria x ananassa HOM05D002829 ORTHO05D003124 7.8e-10 68.6 152 32.2
Lalb_Chr04g0249191 Lupinus albus HOM05D002829 ORTHO05D003124 1.0e-09 68.2 182 25.8
PSO339G3894 Papaver somniferum HOM05D002829 ORTHO05D003124 1.0e-09 68.2 182 25.3
FvH4_3g27940 Fragaria vesca HOM05D002829 ORTHO05D003124 1.7e-09 67.4 151 33.8
FAN11G2404 Fragaria x ananassa HOM05D002829 ORTHO05D003124 1.7e-09 67.4 151 33.8
Nn7g36674 Nelumbo nucifera HOM05D002829 ORTHO05D003124 1.7e-09 67.4 184 27.2
TAR369G0681 Trochodendron aralioides HOM05D002829 ORTHO05D003124 3.9e-09 66.2 167 28.1
Os01g0952900 Oryza sativa ssp. japonica HOM05D002829 ORTHO05D003124 5.1e-09 65.9 193 26.9
MBI13_g17977_MAGBIO Magnolia biondii HOM05D002829 ORTHO05D003124 1.5e-08 64.3 153 32.7
SEGI_01737 Sequoiadendron giganteum HOM05D002829 ORTHO05D003124 1.5e-08 64.3 189 25.9
HPP92_025013 Vanilla planifolia HOM05D002829 ORTHO05D003124 1.5e-08 64.3 195 28.2
Aa31LG3G14890 Aethionema arabicum HOM05D002829 ORTHO05D003124 1.9e-08 63.9 151 31.1
GSVIVG01008464001 Vitis vinifera HOM05D007478 ORTHO05D001700 3.3e-08 63.2 68 44.1
A07p17380 Brassica napus HOM05D001022 ORTHO05D000825 5.6e-08 62.4 68 39.7
ATR0564G119 Amborella trichopoda HOM05D001767 ORTHO05D001714 9.6e-08 61.6 65 41.5
BcaB02g10011 Brassica carinata HOM05D001022 ORTHO05D000825 9.6e-08 61.6 68 39.7
Oeu046159.1 Olea europaea HOM05D007478 ORTHO05D001700 9.6e-08 61.6 162 27.8
Dinv08199 Davidia involucrata HOM05D007478 ORTHO05D001700 1.3e-07 61.2 171 29.8
Nn5g30140 Nelumbo nucifera HOM05D002829 ORTHO05D003124 1.3e-07 61.2 61 49.2
CDE08G1493 Ceratophyllum demersum HOM05D002829 ORTHO05D003124 1.6e-07 60.8 144 27.8
SEGI_19165 Sequoiadendron giganteum HOM05D001022 ORTHO05D000825 1.6e-07 60.8 167 27.5
Lsat_1_v5_gn_8_69441 Lactuca sativa HOM05D006970 ORTHO05D008332 2.1e-07 60.5 152 29.6
A02p44490 Brassica napus HOM05D001022 ORTHO05D000825 2.8e-07 60.1 111 28.8
BraA02t09366Z Brassica rapa HOM05D001022 ORTHO05D000825 2.8e-07 60.1 111 28.8
Hma1.2p1_0584F.1_g183420 Hydrangea macrophylla HOM05D001022 ORTHO05D000825 2.8e-07 60.1 70 34.3
PGR042G0153 Punica granatum HOM05D001022 ORTHO05D000825 2.8e-07 60.1 71 35.2
SEGI_35510 Sequoiadendron giganteum HOM05D001767 ORTHO05D001714 3.6e-07 59.7 64 40.6
BcaB04g20119 Brassica carinata HOM05D001022 ORTHO05D000825 4.8e-07 59.3 68 36.8
A09p09920 Brassica napus HOM05D001022 ORTHO05D000825 6.2e-07 58.9 68 38.2
BolC7t43053H Brassica oleracea HOM05D001022 ORTHO05D000825 6.2e-07 58.9 65 38.5
Lalb_Chr11g0074841 Lupinus albus HOM05D006970 ORTHO05D008332 6.2e-07 58.9 170 28.2
SEGI_04656 Sequoiadendron giganteum HOM05D001935 ORTHO05D001700 6.2e-07 58.9 71 39.4
BcaC04g23136 Brassica carinata HOM05D001022 ORTHO05D000825 8.1e-07 58.5 68 36.8
C07p25270 Brassica napus HOM05D001022 ORTHO05D000825 8.1e-07 58.5 65 38.5
BolC9t54069H Brassica oleracea HOM05D001022 ORTHO05D000825 8.1e-07 58.5 68 36.8
SEGI_39353 Sequoiadendron giganteum HOM05D001767 ORTHO05D001714 8.1e-07 58.5 64 39.1
vmacro02152 Vaccinium macrocarpon HOM05D001022 ORTHO05D000825 1.1e-06 58.2 69 31.9
C09p11790 Brassica napus HOM05D001022 ORTHO05D000825 1.4e-06 57.8 68 36.8
BraA09t36639Z Brassica rapa HOM05D001022 ORTHO05D000825 1.4e-06 57.8 68 38.2
Nn7g36102 Nelumbo nucifera HOM05D002829 ORTHO05D003124 1.4e-06 57.8 66 45.5
Pp3c2_3800 Physcomitrium patens HOM05D023407 ORTHO05D025815 1.4e-06 57.8 171 28.7
Prupe.5G234600 Prunus persica HOM05D007478 ORTHO05D001700 1.4e-06 57.8 166 27.7
TAR629G0885 Trochodendron aralioides HOM05D007478 ORTHO05D001700 1.4e-06 57.8 161 26.1
TWI38G1823 Tripterygium wilfordii HOM05D001767 ORTHO05D001714 1.8e-06 57.4 153 26.8
Thhalv10004516m.g Eutrema salsugineum HOM05D000217 ORTHO05D000121 2.4e-06 57.0 93 30.1
ECA240G4642 Erigeron canadensis HOM05D001022 ORTHO05D000825 4.0e-06 56.2 91 33.0
TWI81G0631 Tripterygium wilfordii HOM05D007478 ORTHO05D001700 4.0e-06 56.2 162 27.8
CiPaw.10G059300 Carya illinoinensis HOM05D001767 ORTHO05D001714 5.3e-06 55.8 151 28.5
QL10p030590 Quercus lobata HOM05D007478 ORTHO05D001700 5.3e-06 55.8 152 26.3
Sp2g30130 Schrenkiella parvula HOM05D001022 ORTHO05D000825 5.3e-06 55.8 68 35.3
PGSC0003DMG400023470 Solanum tuberosum HOM05D002829 ORTHO05D003124 5.3e-06 55.8 69 37.7
AL8G44930 Arabidopsis lyrata HOM05D001022 ORTHO05D000825 6.9e-06 55.5 92 30.4
Ciclev10029512m.g Citrus clementina HOM05D001022 ORTHO05D000825 9.0e-06 55.1 61 34.4
FAN25G1280 Fragaria x ananassa HOM05D002829 ORTHO05D003124 9.0e-06 55.1 52 53.8


User provided reference genes

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