Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_746.g26840 Utricularia gibba HOM05D006992 ORTHO05D008752 3.1e-78 295.0 146 100.0
Migut.N01946 Erythranthe guttata HOM05D006992 ORTHO05D008752 1.3e-65 253.1 144 83.3
Cc02_g31290 Coffea canephora HOM05D006992 ORTHO05D008752 2.4e-62 242.3 145 78.6
Actinidia33837 Actinidia chinensis HOM05D006992 ORTHO05D008752 9.0e-62 240.4 145 79.3
CSS0031345 Camellia sinensis var. sinensis HOM05D006992 ORTHO05D008752 4.5e-61 238.0 140 80.0
Dinv17742 Davidia involucrata HOM05D004868 ORTHO05D006030 4.5e-61 238.0 143 79.7
Nn3g21348 Nelumbo nucifera HOM05D006992 ORTHO05D008752 7.6e-61 237.3 143 79.7
Sed0003148 Sechium edule HOM05D006992 ORTHO05D008752 4.9e-60 234.6 144 79.9
TAR633G1762 Trochodendron aralioides HOM05D006992 ORTHO05D008752 4.9e-60 234.6 140 80.0
vmacro19674 Vaccinium macrocarpon HOM05D006992 ORTHO05D008752 4.9e-60 234.6 138 82.6
Sc09g0003710 Simmondsia chinensis HOM05D006992 ORTHO05D008752 1.1e-59 233.4 144 75.0
CAN.G424.13 Capsicum annuum HOM05D006992 ORTHO05D008752 1.4e-59 233.0 143 77.6
CiPaw.08G178000 Carya illinoinensis HOM05D006992 ORTHO05D008752 2.4e-59 232.3 140 77.1
Oeu012474.1 Olea europaea HOM05D006992 ORTHO05D008752 4.2e-59 231.5 138 79.7
ClCG03G016340 Citrullus lanatus HOM05D006992 ORTHO05D008752 9.3e-59 230.3 141 77.3
Lsat_1_v5_gn_2_67081 Lactuca sativa HOM05D006992 ORTHO05D008752 9.3e-59 230.3 140 77.9
MELO3C015384.2 Cucumis melo HOM05D006992 ORTHO05D008752 1.2e-58 229.9 141 78.0
Rhsim05G0148900 Rhododendron simsii HOM05D006992 ORTHO05D008752 1.2e-58 229.9 138 80.4
CsaV3_1G039620 Cucumis sativus L. HOM05D006992 ORTHO05D008752 1.6e-58 229.6 141 78.0
Potri.013G034100 Populus trichocarpa HOM05D006992 ORTHO05D008752 1.6e-58 229.6 143 76.2
CiPaw.07G008900 Carya illinoinensis HOM05D006992 ORTHO05D008752 2.7e-58 228.8 140 77.1
Gohir.A13G106100 Gossypium hirsutum HOM05D006992 ORTHO05D008752 6.0e-58 227.6 141 75.9
Atru.chr2.657 Acer truncatum HOM05D006992 ORTHO05D008752 7.9e-58 227.3 140 77.1
Ciclev10002483m.g Citrus clementina HOM05D006992 ORTHO05D008752 1.3e-57 226.5 141 76.6
MD12G1234200 Malus domestica HOM05D006992 ORTHO05D008752 1.3e-57 226.5 143 74.1
Eucgr.B01740 Eucalyptus grandis HOM05D006992 ORTHO05D008752 1.8e-57 226.1 143 75.5
Gohir.D13G108900 Gossypium hirsutum HOM05D006992 ORTHO05D008752 1.8e-57 226.1 141 75.2
Gorai.013G122400 Gossypium raimondii HOM05D006992 ORTHO05D008752 1.8e-57 226.1 141 75.2
GSVIVG01021889001 Vitis vinifera HOM05D006992 ORTHO05D008752 1.8e-57 226.1 140 76.4
Migut.N01944 Erythranthe guttata HOM05D006992 ORTHO05D008752 2.3e-57 225.7 145 75.2
Manes.09G157800 Manihot esculenta HOM05D006992 ORTHO05D008752 3.9e-57 224.9 140 75.0
Prupe.6G337300 Prunus persica HOM05D006992 ORTHO05D008752 3.9e-57 224.9 143 73.4
HanXRQChr14g0445751 Helianthus annuus HOM05D006992 ORTHO05D008752 5.1e-57 224.6 138 76.8
Hund06999 Selenicereus undatus HOM05D006992 ORTHO05D008752 6.7e-57 224.2 137 78.1
Solyc02g079130.3 Solanum lycopersicum HOM05D006992 ORTHO05D008752 6.7e-57 224.2 143 72.0
Sopen02g023930 Solanum pennellii HOM05D006992 ORTHO05D008752 6.7e-57 224.2 143 72.0
PGR083G1999 Punica granatum HOM05D006992 ORTHO05D008752 8.7e-57 223.8 140 74.3
PGSC0003DMG400022358 Solanum tuberosum HOM05D006992 ORTHO05D008752 8.7e-57 223.8 143 72.0
RcHm_v2.0_Chr3g0452481 Rosa chinensis HOM05D006992 ORTHO05D008752 1.5e-56 223.0 144 72.2
Thecc.05G291400 Theobroma cacao HOM05D006992 ORTHO05D008752 1.5e-56 223.0 137 78.1
Psat0s2796g0040 Pisum sativum HOM05D006992 ORTHO05D008752 1.9e-56 222.6 143 72.0
CANSAT54G1892 Cannabis sativa HOM05D006992 ORTHO05D008752 2.5e-56 222.2 143 72.0
CDE02G3150 Ceratophyllum demersum HOM05D006992 ORTHO05D008752 2.5e-56 222.2 142 73.9
FvH4_6g03930 Fragaria vesca HOM05D006992 ORTHO05D008752 2.5e-56 222.2 144 72.2
Phvul.006G097900 Phaseolus vulgaris HOM05D006992 ORTHO05D008752 2.5e-56 222.2 143 73.4
ATR0706G207 Amborella trichopoda HOM05D006992 ORTHO05D008752 3.3e-56 221.9 138 76.1
Lj1g0025869 Lotus japonicus HOM05D006992 ORTHO05D008752 5.6e-56 221.1 143 73.4
SGA_v2.0_scaffold80G25908 Striga asiatica HOM05D006992 ORTHO05D008752 5.6e-56 221.1 137 76.6
ECA238G1326 Erigeron canadensis HOM05D006992 ORTHO05D008752 7.4e-56 220.7 139 76.3
Peaxi162Scf00103g00035 Petunia axillaris HOM05D006992 ORTHO05D008752 9.6e-56 220.3 143 69.2
Glyma.19G241400 Glycine max HOM05D006992 ORTHO05D008752 1.3e-55 219.9 143 71.3
AT3G04950 Arabidopsis thaliana HOM05D006992 ORTHO05D008752 1.6e-55 219.5 140 72.1
TWI36G0139 Tripterygium wilfordii HOM05D006992 ORTHO05D008752 1.6e-55 219.5 140 75.0
Cfa006481 Carpinus fangiana HOM05D006992 ORTHO05D008752 2.1e-55 219.2 135 77.0
THA.LOC104818652 Tarenaya hassleriana HOM05D006992 ORTHO05D008752 2.1e-55 219.2 140 72.1
AL3G15290 Arabidopsis lyrata HOM05D006992 ORTHO05D008752 2.8e-55 218.8 140 71.4
Thhalv10021439m.g Eutrema salsugineum HOM05D006992 ORTHO05D008752 2.8e-55 218.8 140 72.1
Ca_09397_v3 Cicer arietinum L. HOM05D006992 ORTHO05D008752 3.7e-55 218.4 143 70.6
Sp3g03770 Schrenkiella parvula HOM05D006992 ORTHO05D008752 3.7e-55 218.4 140 71.4
QL03p000176 Quercus lobata HOM05D006992 ORTHO05D008752 4.8e-55 218.0 134 76.9
SalBow3G4063 Salvia bowleyana HOM05D006992 ORTHO05D008752 6.2e-55 217.6 155 67.7
BcaB04g19286 Brassica carinata HOM05D006992 ORTHO05D008752 1.4e-54 216.5 140 71.4
BcaC01g04339 Brassica carinata HOM05D006992 ORTHO05D008752 1.4e-54 216.5 140 71.4
Gohir.A11G256900 Gossypium hirsutum HOM05D006992 ORTHO05D008752 1.4e-54 216.5 140 71.4
Gorai.007G286500 Gossypium raimondii HOM05D006992 ORTHO05D008752 1.4e-54 216.5 140 72.1
Lalb_Chr18g0045231 Lupinus albus HOM05D006992 ORTHO05D008752 1.8e-54 216.1 143 71.3
Nitab4.5_0001410g0140 Nicotiana tabacum HOM05D006992 ORTHO05D008752 1.8e-54 216.1 138 73.9
Carub.0003s0417 Capsella rubella HOM05D006992 ORTHO05D008752 2.4e-54 215.7 140 70.7
TPR.G6916 Trifolium pratense HOM05D006992 ORTHO05D008752 2.4e-54 215.7 143 70.6
COL.COLO4_13636 Corchorus olitorius HOM05D004868 ORTHO05D006030 3.1e-54 215.3 135 75.6
CARHR079260 Cardamine hirsuta HOM05D006992 ORTHO05D008752 6.9e-54 214.2 140 69.3
Nitab4.5_0004284g0080 Nicotiana tabacum HOM05D006992 ORTHO05D008752 1.5e-53 213.0 138 73.2
PSO210G3204 Papaver somniferum HOM05D006992 ORTHO05D008752 1.5e-53 213.0 140 70.7
Medtr7g114390 Medicago truncatula HOM05D006992 ORTHO05D008752 3.4e-53 211.8 143 67.8
PSO832G0773 Papaver somniferum HOM05D006992 ORTHO05D008752 3.4e-53 211.8 140 70.0
Sabra13G0033300 Salix brachista HOM05D006992 ORTHO05D008752 3.4e-53 211.8 135 74.8
FAN09G1577 Fragaria x ananassa HOM05D000167 ORTHO05D000640 9.9e-53 210.3 138 72.5
FAN14G0596 Fragaria x ananassa HOM05D006992 ORTHO05D008752 9.9e-53 210.3 138 72.5
FAN05G0877 Fragaria x ananassa HOM05D000167 ORTHO05D000640 2.9e-52 208.8 138 71.7
AUR62000954 Chenopodium quinoa HOM05D006992 ORTHO05D008752 8.4e-52 207.2 138 72.5
FAN05G5181 Fragaria x ananassa HOM05D006992 ORTHO05D008752 1.1e-51 206.8 137 71.5
DCAR_022834 Daucus carota HOM05D006992 ORTHO05D008752 1.4e-51 206.5 135 74.1
Aqoxy5G00680 Aquilegia oxysepala HOM05D006992 ORTHO05D008752 3.2e-51 205.3 143 72.7
EL10Ac4g09207 Beta vulgaris HOM05D006992 ORTHO05D008752 3.2e-51 205.3 138 71.0
QL03p000513 Quercus lobata HOM05D006992 ORTHO05D008752 4.2e-51 204.9 157 65.6
BolC3t16415H Brassica oleracea HOM05D006992 ORTHO05D008752 5.5e-51 204.5 135 71.1
BraA03t12570Z Brassica rapa HOM05D006992 ORTHO05D008752 5.5e-51 204.5 135 71.1
A03p33950 Brassica napus HOM05D003164 ORTHO05D003575 2.1e-50 202.6 134 70.9
C03p41330 Brassica napus HOM05D003164 ORTHO05D003575 4.6e-50 201.4 134 70.1
Os06g0298500 Oryza sativa ssp. japonica HOM05D006992 ORTHO05D008752 2.3e-49 199.1 141 67.4
arahy.Tifrunner.gnm1.ann1.ZZK2AU Arachis hypogaea HOM05D006992 ORTHO05D008752 3.9e-49 198.4 147 66.0
FAN02G1922 Fragaria x ananassa HOM05D000167 ORTHO05D000640 3.9e-49 198.4 138 69.6
Lj7A478T92 Lonicera japonica HOM05D006992 ORTHO05D008752 7.4e-48 194.1 212 50.9
HPP92_017993 Vanilla planifolia HOM05D006992 ORTHO05D008752 3.7e-47 191.8 141 63.8
HPP92_026697 Vanilla planifolia HOM05D006992 ORTHO05D008752 1.4e-46 189.9 141 63.8
arahy.Tifrunner.gnm1.ann1.26USVU Arachis hypogaea HOM05D006992 ORTHO05D008752 4.0e-46 188.3 139 66.9
SEGI_08689 Sequoiadendron giganteum HOM05D006992 ORTHO05D008752 6.9e-46 187.6 135 66.7
Zm00001eb381040 Zea mays HOM05D006992 ORTHO05D008752 1.2e-45 186.8 141 64.5
AUR62005014 Chenopodium quinoa HOM05D006992 ORTHO05D008752 9.3e-43 177.2 120 70.0
Haze_04310 Corylus avellana HOM05D006992 ORTHO05D008752 2.7e-42 175.6 230 45.7
Cpa.g.sc117.39 Carica papaya HOM05D004868 ORTHO05D006030 6.3e-39 164.5 99 80.8
Gohir.D03G094700 Gossypium hirsutum HOM05D006992 ORTHO05D008752 2.9e-36 155.6 97 73.2
Ca_30169_v3 Cicer arietinum L. HOM05D006992 ORTHO05D008752 1.1e-32 143.7 99 66.7
Gohir.D11G266700 Gossypium hirsutum HOM05D006992 ORTHO05D008752 2.5e-32 142.5 97 68.0
VMungo0540G1333 Vigna mungo HOM05D006992 ORTHO05D008752 7.4e-32 141.0 99 65.7
Glyma.03G244000 Glycine max HOM05D006992 ORTHO05D008752 1.4e-30 136.7 104 61.5
Gohir.D07G141600 Gossypium hirsutum HOM05D006992 ORTHO05D008752 4.5e-29 131.7 78 78.2
Aa31LG5G15340 Aethionema arabicum HOM05D006992 ORTHO05D008752 1.0e-28 130.6 80 75.0
Gorai.001G169400 Gossypium raimondii HOM05D006992 ORTHO05D008752 1.0e-28 130.6 78 76.9
PSO210G4341 Papaver somniferum HOM05D006992 ORTHO05D008752 5.0e-28 128.3 112 57.1
PSO339G2351 Papaver somniferum HOM05D006992 ORTHO05D008752 1.1e-27 127.1 112 55.4
Gohir.D12G044200 Gossypium hirsutum HOM05D006992 ORTHO05D008752 1.9e-27 126.3 78 74.4
SEGI_13740 Sequoiadendron giganteum HOM05D006992 ORTHO05D008752 2.7e-26 122.5 97 60.8
PSO384G0024 Papaver somniferum HOM05D006992 ORTHO05D008752 4.7e-26 121.7 112 53.6
FAN05G0951 Fragaria x ananassa HOM05D000167 ORTHO05D000640 3.0e-25 119.0 130 50.8
SMO361G0250 Selaginella moellendorffii HOM05D006992 ORTHO05D008752 6.1e-18 94.7 141 42.6
RcHm_v2.0_Chr1g0321781 Rosa chinensis HOM05D006992 ORTHO05D008752 1.3e-15 87.0 61 62.3
Gohir.D03G082200 Gossypium hirsutum HOM05D006992 ORTHO05D008752 3.7e-15 85.5 54 74.1
RcHm_v2.0_Chr6g0246461 Rosa chinensis HOM05D006992 ORTHO05D008752 3.7e-15 85.5 61 60.7
VMungo0331G0785 Vigna mungo HOM05D006992 ORTHO05D008752 1.1e-11 73.9 73 49.3
Gorai.010G111000 Gossypium raimondii HOM05D001408 ORTHO05D001312 4.7e-10 68.6 40 75.0
Sp3g03780 Schrenkiella parvula HOM05D000160 ORTHO05D000914 2.3e-09 66.2 39 79.5
Gohir.D06G096300 Gossypium hirsutum HOM05D001408 ORTHO05D001312 4.0e-09 65.5 40 70.0
Gorai.008G101100 Gossypium raimondii HOM05D006061 ORTHO05D007450 5.2e-09 65.1 39 74.4
RcHm_v2.0_Chr3g0452531 Rosa chinensis HOM05D006992 ORTHO05D008752 2.8e-07 59.3 48 66.7


User provided reference genes

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