Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_746.g26814 Utricularia gibba HOM05D005146 ORTHO05D006752 2.3e-159 565.5 280 100.0
SGA_v2.0_scaffold12G05971 Striga asiatica HOM05D005146 ORTHO05D006752 1.6e-128 463.0 278 79.9
Migut.N03153 Erythranthe guttata HOM05D005146 ORTHO05D006752 2.1e-128 462.6 272 81.6
TWI56G0936 Tripterygium wilfordii HOM05D005146 ORTHO05D006752 2.2e-125 452.6 272 79.0
Eucgr.F01641 Eucalyptus grandis HOM05D005146 ORTHO05D006752 4.9e-125 451.4 277 78.0
PGR083G0855 Punica granatum HOM05D005146 ORTHO05D006752 1.1e-124 450.3 279 77.4
PGSC0003DMG400003775 Solanum tuberosum HOM05D005146 ORTHO05D006752 1.1e-124 450.3 272 78.3
QL02p011373 Quercus lobata HOM05D005146 ORTHO05D006752 1.9e-124 449.5 272 77.9
Dinv31832 Davidia involucrata HOM05D005146 ORTHO05D006752 2.4e-124 449.1 272 77.9
Sabra02G0019300 Salix brachista HOM05D005146 ORTHO05D006752 2.4e-124 449.1 272 78.3
Potri.002G023700 Populus trichocarpa HOM05D005146 ORTHO05D006752 4.2e-124 448.4 272 77.9
MD15G1013600 Malus domestica HOM05D005146 ORTHO05D006752 2.1e-123 446.0 270 78.1
DCAR_009928 Daucus carota HOM05D005146 ORTHO05D006752 3.5e-123 445.3 272 77.6
Nitab4.5_0001540g0020 Nicotiana tabacum HOM05D005146 ORTHO05D006752 3.5e-123 445.3 272 77.9
CAN.G311.14 Capsicum annuum HOM05D005146 ORTHO05D006752 4.6e-123 444.9 272 77.6
Gohir.D08G020900 Gossypium hirsutum HOM05D005146 ORTHO05D006752 4.6e-123 444.9 272 77.2
Solyc04g081310.3 Solanum lycopersicum HOM05D005146 ORTHO05D006752 4.6e-123 444.9 272 77.6
Sopen04g034930 Solanum pennellii HOM05D005146 ORTHO05D006752 4.6e-123 444.9 272 77.6
PSO700G0287 Papaver somniferum HOM05D005146 ORTHO05D006752 6.0e-123 444.5 274 77.4
Rhsim06G0022400 Rhododendron simsii HOM05D005146 ORTHO05D006752 6.0e-123 444.5 272 78.3
PSO170G4907 Papaver somniferum HOM05D005146 ORTHO05D006752 7.8e-123 444.1 277 76.9
Prupe.1G367100 Prunus persica HOM05D005146 ORTHO05D006752 1.0e-122 443.7 274 76.6
Ciclev10002090m.g Citrus clementina HOM05D005146 ORTHO05D006752 1.3e-122 443.4 272 78.7
Thecc.09G245400 Theobroma cacao HOM05D005146 ORTHO05D006752 1.3e-122 443.4 272 76.8
GSVIVG01009887001 Vitis vinifera HOM05D005146 ORTHO05D006752 1.3e-122 443.4 272 77.2
Cpa.g.sc1059.3 Carica papaya HOM05D005146 ORTHO05D006752 2.3e-122 442.6 274 77.4
Cc10_g01800 Coffea canephora HOM05D005146 ORTHO05D006752 2.3e-122 442.6 274 77.4
Manes.05G148600 Manihot esculenta HOM05D005146 ORTHO05D006752 3.0e-122 442.2 272 77.9
Actinidia15413 Actinidia chinensis HOM05D005146 ORTHO05D006752 3.9e-122 441.8 272 77.6
Gohir.A08G010500 Gossypium hirsutum HOM05D005146 ORTHO05D006752 3.9e-122 441.8 272 76.8
CANSAT11G0704 Cannabis sativa HOM05D005146 ORTHO05D006752 6.6e-122 441.0 274 76.3
Manes.11G065850 Manihot esculenta HOM05D005146 ORTHO05D006752 6.6e-122 441.0 272 77.6
Aqoxy5G01768 Aquilegia oxysepala HOM05D005146 ORTHO05D006752 1.1e-121 440.3 274 75.9
CiPaw.07G151400 Carya illinoinensis HOM05D005146 ORTHO05D006752 2.5e-121 439.1 272 76.5
MD08G1014100 Malus domestica HOM05D005146 ORTHO05D006752 2.5e-121 439.1 270 76.3
RcHm_v2.0_Chr6g0302671 Rosa chinensis HOM05D005146 ORTHO05D006752 2.5e-121 439.1 270 76.7
ECA238G2776 Erigeron canadensis HOM05D005146 ORTHO05D006752 3.3e-121 438.7 270 77.4
Nn6g32362 Nelumbo nucifera HOM05D005146 ORTHO05D006752 3.3e-121 438.7 274 75.9
Atru.chr13.312 Acer truncatum HOM05D005146 ORTHO05D006752 5.6e-121 438.0 272 77.6
Lsat_1_v5_gn_2_8601 Lactuca sativa HOM05D005146 ORTHO05D006752 2.1e-120 436.0 270 77.0
FAN27G1976 Fragaria x ananassa HOM05D005146 ORTHO05D006752 2.8e-120 435.6 270 76.7
ATR0797G002 Amborella trichopoda HOM05D005146 ORTHO05D006752 4.8e-120 434.9 272 75.4
FvH4_2g38650 Fragaria vesca HOM05D005146 ORTHO05D006752 6.2e-120 434.5 270 76.3
Haze_04102 Corylus avellana HOM05D005146 ORTHO05D006752 8.1e-120 434.1 272 75.7
Os03g0355800 Oryza sativa ssp. japonica HOM05D005146 ORTHO05D006752 8.1e-120 434.1 272 73.9
Hund05199 Selenicereus undatus HOM05D005146 ORTHO05D006752 8.1e-120 434.1 272 74.6
Cfa006669 Carpinus fangiana HOM05D005146 ORTHO05D006752 1.1e-119 433.7 272 76.1
CsaV3_2G029420 Cucumis sativus L. HOM05D005146 ORTHO05D006752 1.4e-119 433.3 270 75.9
Thhalv10025950m.g Eutrema salsugineum HOM05D005146 ORTHO05D006752 1.4e-119 433.3 271 77.1
FAN15G2679 Fragaria x ananassa HOM05D005146 ORTHO05D006752 2.4e-119 432.6 270 75.9
CSS0007392 Camellia sinensis var. sinensis HOM05D005146 ORTHO05D006752 3.1e-119 432.2 272 76.8
CSS0032974 Camellia sinensis var. sinensis HOM05D005146 ORTHO05D006752 3.1e-119 432.2 272 76.8
HanXRQChr06g0183611 Helianthus annuus HOM05D005146 ORTHO05D006752 5.3e-119 431.4 270 76.3
Sed0001191 Sechium edule HOM05D005146 ORTHO05D006752 5.3e-119 431.4 270 74.8
HPP92_027733 Vanilla planifolia HOM05D005146 ORTHO05D006752 5.3e-119 431.4 270 75.6
Sp7g29580 Schrenkiella parvula HOM05D005146 ORTHO05D006752 6.9e-119 431.0 271 76.0
TPR.G34539 Trifolium pratense HOM05D005146 ORTHO05D006752 6.9e-119 431.0 270 74.8
Medtr3g113750 Medicago truncatula HOM05D005146 ORTHO05D006752 2.0e-118 429.5 276 73.6
Oeu020876.1 Olea europaea HOM05D005146 ORTHO05D006752 2.0e-118 429.5 262 77.5
BcaNung05185 Brassica carinata HOM05D005146 ORTHO05D006752 2.6e-118 429.1 271 75.6
BraA01t00610Z Brassica rapa HOM05D005146 ORTHO05D006752 2.6e-118 429.1 271 75.6
FAN20G2808 Fragaria x ananassa HOM05D005146 ORTHO05D006752 2.6e-118 429.1 270 75.6
VMungo0251G0853 Vigna mungo HOM05D005146 ORTHO05D006752 3.4e-118 428.7 270 73.3
EL10Ac6g13895 Beta vulgaris HOM05D005146 ORTHO05D006752 4.5e-118 428.3 306 69.9
Phvul.001G002400 Phaseolus vulgaris HOM05D005146 ORTHO05D006752 4.5e-118 428.3 270 73.7
THA.LOC104825772 Tarenaya hassleriana HOM05D005146 ORTHO05D006752 4.5e-118 428.3 270 73.7
BcaC09g51970 Brassica carinata HOM05D005146 ORTHO05D006752 5.8e-118 427.9 271 75.6
BolC1t00708H Brassica oleracea HOM05D005146 ORTHO05D006752 5.8e-118 427.9 271 75.6
Psat5g013440 Pisum sativum HOM05D005146 ORTHO05D006752 5.8e-118 427.9 270 74.4
C01p07160 Brassica napus HOM05D005146 ORTHO05D006752 9.9e-118 427.2 271 75.6
AL7G20220 Arabidopsis lyrata HOM05D005146 ORTHO05D006752 1.3e-117 426.8 271 76.0
A01p06490 Brassica napus HOM05D005146 ORTHO05D006752 1.3e-117 426.8 271 75.3
CARHR239690 Cardamine hirsuta HOM05D005146 ORTHO05D006752 1.3e-117 426.8 271 75.3
Glyma.20G014100 Glycine max HOM05D005146 ORTHO05D006752 1.3e-117 426.8 270 74.4
Zm00001eb017150 Zea mays HOM05D005146 ORTHO05D006752 1.3e-117 426.8 272 73.2
AT4G31790 Arabidopsis thaliana HOM05D005146 ORTHO05D006752 1.7e-117 426.4 271 76.0
Carub.0007s0877 Capsella rubella HOM05D005146 ORTHO05D006752 1.7e-117 426.4 271 75.3
Lj1g0002754 Lotus japonicus HOM05D005146 ORTHO05D006752 2.2e-117 426.0 270 73.7
Lalb_Chr23g0266181 Lupinus albus HOM05D005146 ORTHO05D006752 2.2e-117 426.0 270 73.7
Glyma.07G217500 Glycine max HOM05D005146 ORTHO05D006752 4.9e-117 424.9 270 73.7
AUR62019460 Chenopodium quinoa HOM05D005146 ORTHO05D006752 8.4e-117 424.1 274 75.2
Aa31LG2G18510 Aethionema arabicum HOM05D005146 ORTHO05D006752 1.1e-116 423.7 271 74.5
Ah.08g209140 Amaranthus hybridus HOM05D005146 ORTHO05D006752 1.1e-116 423.7 304 70.1
Pp3c25_4490 Physcomitrium patens HOM05D005146 ORTHO05D006752 3.2e-116 422.2 270 73.7
Ca_14210_v3 Cicer arietinum L. HOM05D005146 ORTHO05D006752 3.5e-115 418.7 270 73.0
arahy.Tifrunner.gnm1.ann1.RM6BI2 Arachis hypogaea HOM05D005146 ORTHO05D006752 1.8e-114 416.4 270 72.6
COL.COLO4_37538 Corchorus olitorius HOM05D005146 ORTHO05D006752 3.0e-114 415.6 257 77.4
arahy.Tifrunner.gnm1.ann1.DQ6KFY Arachis hypogaea HOM05D005146 ORTHO05D006752 3.9e-114 415.2 270 73.0
arahy.Tifrunner.gnm1.ann1.VN499F Arachis hypogaea HOM05D005146 ORTHO05D006752 1.1e-113 413.7 270 73.0
AagrBONN_evm.TU.Sc2ySwM_117.1420 Anthoceros agrestis HOM05D005146 ORTHO05D006752 9.6e-113 410.6 270 70.0
Lj5g0000481 Lotus japonicus HOM05D005146 ORTHO05D006752 1.6e-112 409.8 270 71.9
Aqoxy6G00492 Aquilegia oxysepala HOM05D005146 ORTHO05D006752 3.7e-112 408.7 263 72.6
Mapoly0107s0028 Marchantia polymorpha HOM05D005146 ORTHO05D006752 3.7e-112 408.7 270 70.4
AagrBONN_evm.TU.Sc2ySwM_368.2751 Anthoceros agrestis HOM05D005146 ORTHO05D006752 4.8e-112 408.3 270 70.0
SalBow3G2629 Salvia bowleyana HOM05D005146 ORTHO05D006752 2.6e-110 402.5 243 77.0
arahy.Tifrunner.gnm1.ann1.NX94TN Arachis hypogaea HOM05D005146 ORTHO05D006752 3.8e-109 398.7 300 65.0
Gorai.004G015300 Gossypium raimondii HOM05D005146 ORTHO05D006752 4.9e-109 398.3 272 70.2
ClCG08G014400 Citrullus lanatus HOM05D005146 ORTHO05D006752 4.2e-108 395.2 270 70.0
Duzib150G0501 Durio zibethinus HOM05D005146 ORTHO05D006752 4.2e-108 395.2 272 69.5
MBI09_g15694_MAGBIO Magnolia biondii HOM05D005146 ORTHO05D006752 7.9e-107 391.0 383 54.8
Peaxi162Scf00438g00626 Petunia axillaris HOM05D005146 ORTHO05D006752 3.3e-105 385.6 272 69.9
MELO3C011001.2 Cucumis melo HOM05D005146 ORTHO05D006752 1.6e-104 383.3 282 66.7
HPP92_026026 Vanilla planifolia HOM05D005146 ORTHO05D006752 2.1e-104 382.9 243 74.9
CBR_g41468 Chara braunii HOM05D005146 ORTHO05D006752 2.0e-102 376.3 270 67.8
SMO146G0393 Selaginella moellendorffii HOM05D005146 ORTHO05D006752 1.1e-100 370.5 272 62.9
CDE05G1835 Ceratophyllum demersum HOM05D005146 ORTHO05D006752 1.6e-99 366.7 247 70.4
vmacro21720 Vaccinium macrocarpon HOM05D005146 ORTHO05D006752 5.1e-98 361.7 222 77.5
Hma1.2p1_0638F.1_g193760 Hydrangea macrophylla HOM05D005146 ORTHO05D006752 2.4e-95 352.8 222 75.2
MCO08G273 Micromonas commoda HOM05D005146 ORTHO05D006752 1.2e-94 350.5 279 63.1
Cre05.g233300 Chlamydomonas reinhardtii HOM05D005146 ORTHO05D006752 8.5e-93 344.4 270 62.2
CSS0032399 Camellia sinensis var. sinensis HOM05D005146 ORTHO05D006752 2.5e-92 342.8 251 68.1
RcHm_v2.0_Chr7g0221331 Rosa chinensis HOM05D005146 ORTHO05D006752 9.4e-92 340.9 270 62.6
PRCOL_00004436 Prasinoderma coloniale HOM05D005146 ORTHO05D006752 6.1e-91 338.2 292 57.9
Lsat_1_v5_gn_2_8681 Lactuca sativa HOM05D004999 ORTHO05D007513 6.3e-88 328.2 220 72.7
TAR628G0140 Trochodendron aralioides HOM05D005146 ORTHO05D006752 1.2e-86 323.9 196 78.6
C09p44220 Brassica napus HOM05D005146 ORTHO05D006752 4.4e-81 305.4 271 57.6
BolC8t49001H Brassica oleracea HOM05D005146 ORTHO05D006752 4.4e-81 305.4 271 58.7
C08p13630 Brassica napus HOM05D005146 ORTHO05D006752 1.7e-80 303.5 271 58.3
Sc26g0004380 Simmondsia chinensis HOM05D005146 ORTHO05D006752 2.2e-80 303.1 192 73.4
Haze_26822 Corylus avellana HOM05D005146 ORTHO05D006752 7.2e-76 288.1 278 50.4
Oeu039057.1 Olea europaea HOM05D005146 ORTHO05D006752 8.0e-75 284.6 244 60.7
ATR0816G001 Amborella trichopoda HOM05D005146 ORTHO05D006752 1.4e-74 283.9 168 80.4
BcaC04g20385 Brassica carinata HOM05D005146 ORTHO05D006752 1.5e-73 280.4 272 53.7
MSTRG.25237 Avicennia marina HOM05D005146 ORTHO05D006752 4.2e-68 262.3 162 74.1
BcaC04g20389 Brassica carinata HOM05D005146 ORTHO05D006752 9.4e-68 261.2 271 51.7
Lj4A797T61 Lonicera japonica HOM05D005146 ORTHO05D006752 4.8e-64 248.8 152 80.3
Medtr1g107520 Medicago truncatula HOM05D005146 ORTHO05D006752 3.2e-60 236.1 165 69.7
AUR62036170 Chenopodium quinoa HOM05D005146 ORTHO05D006752 5.5e-60 235.3 209 59.8
BcaC04g20387 Brassica carinata HOM05D005146 ORTHO05D006752 8.3e-48 194.9 272 43.8
Duzib170G0783 Durio zibethinus HOM05D005146 ORTHO05D006752 8.3e-48 194.9 278 41.7
BolC9t57294H Brassica oleracea HOM05D005146 ORTHO05D006752 4.6e-46 189.1 153 61.4
CSS0002428 Camellia sinensis var. sinensis HOM05D005146 ORTHO05D006752 1.1e-44 184.5 276 44.2
MELO3C029148.2 Cucumis melo HOM05D005146 ORTHO05D006752 5.8e-41 172.2 142 62.7
Medtr3g114210 Medicago truncatula HOM05D005146 ORTHO05D006752 1.3e-32 144.4 148 54.7
BolC8t52160H Brassica oleracea HOM05D005146 ORTHO05D032927 6.4e-32 142.1 270 40.0
Lj4A797T60 Lonicera japonica HOM05D005146 ORTHO05D006752 4.1e-31 139.4 97 68.0
BcaC07g41610 Brassica carinata HOM05D005146 ORTHO05D032927 8.6e-29 131.7 278 36.0
SEGI_30125 Sequoiadendron giganteum HOM05D005146 ORTHO05D006752 1.9e-28 130.6 92 69.6
BcaC04g20388 Brassica carinata HOM05D005146 ORTHO05D006752 2.5e-28 130.2 185 41.6
Oeu039054.1 Olea europaea HOM05D000784 ORTHO05D000116 1.8e-26 124.0 79 69.6
C08p46100 Brassica napus HOM05D005146 ORTHO05D032927 9.9e-25 118.2 270 34.8
Lsat_1_v5_gn_2_8581 Lactuca sativa HOM05D000202 ORTHO05D000117 2.7e-22 110.2 135 41.5
Lsat_1_v5_gn_2_8661 Lactuca sativa HOM05D000202 ORTHO05D000117 2.3e-21 107.1 135 40.7
MELO3C032066.2 Cucumis melo HOM05D005146 ORTHO05D006752 2.0e-17 94.0 73 61.6
CAN.G1688.3 Capsicum annuum HOM05D005146 ORTHO05D011342 2.6e-17 93.6 67 64.2
BcaNung04119 Brassica carinata HOM05D001941 ORTHO05D002198 3.6e-11 73.2 45 75.6
Actinidia16979 Actinidia chinensis HOM05D005146 ORTHO05D006752 4.4e-09 66.2 91 40.7
MELO3C033356.2 Cucumis melo HOM05D005146 ORTHO05D166957 9.9e-09 65.1 49 61.2
Cfa017682 Carpinus fangiana HOM05D005146 ORTHO05D123472 6.0e-06 55.8 49 57.1


User provided reference genes

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