Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_746.g26803 Utricularia gibba HOM05D003641 ORTHO05D004915 3.5e-211 738.0 371 100.0
unitig_899.g15167 Utricularia gibba HOM05D003641 ORTHO05D004915 4.8e-160 568.2 328 86.3
SGA_v2.0_scaffold105G30499 Striga asiatica HOM05D003641 ORTHO05D004915 1.6e-152 543.1 341 76.5
MSTRG.19915 Avicennia marina HOM05D003641 ORTHO05D004915 1.2e-147 526.9 340 76.2
SGA_v2.0_scaffold69G23056 Striga asiatica HOM05D003641 ORTHO05D004915 1.8e-146 523.1 341 76.5
Migut.J01850 Erythranthe guttata HOM05D003641 ORTHO05D004915 3.0e-146 522.3 343 76.1
Oeu063867.1 Olea europaea HOM05D003641 ORTHO05D004915 3.3e-145 518.8 335 73.1
Oeu006209.1 Olea europaea HOM05D003641 ORTHO05D004915 5.7e-145 518.1 349 69.9
SalBow6G5303 Salvia bowleyana HOM05D003641 ORTHO05D004915 7.4e-145 517.7 339 74.3
Manes.09G037400 Manihot esculenta HOM05D003641 ORTHO05D004915 2.8e-136 489.2 334 69.2
Nitab4.5_0007274g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.1e-135 487.3 337 69.1
Peaxi162Scf00258g00921 Petunia axillaris HOM05D003641 ORTHO05D004915 4.1e-135 485.3 339 67.8
Sopen10g029550 Solanum pennellii HOM05D003641 ORTHO05D004915 2.6e-134 482.6 338 67.5
PGSC0003DMG400011447 Solanum tuberosum HOM05D003641 ORTHO05D004915 2.6e-134 482.6 338 66.9
TWI53G2154 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 4.5e-134 481.9 334 67.4
CAN.G960.10 Capsicum annuum HOM05D003641 ORTHO05D004915 7.7e-134 481.1 342 66.7
Lj2A365T90 Lonicera japonica HOM05D003641 ORTHO05D004915 2.9e-133 479.2 330 71.2
TWI74G1529 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 5.0e-133 478.4 326 68.4
Solyc10g078930.2 Solanum lycopersicum HOM05D003641 ORTHO05D004915 6.5e-133 478.0 338 66.3
Manes.08G042800 Manihot esculenta HOM05D003641 ORTHO05D004915 1.4e-132 476.9 330 69.1
Sabra06G0149100 Salix brachista HOM05D003641 ORTHO05D004915 3.2e-132 475.7 327 69.4
Aa31sc80G90 Aethionema arabicum HOM05D003641 ORTHO05D004915 4.7e-131 471.9 345 66.1
FvH4_6g21990 Fragaria vesca HOM05D003641 ORTHO05D004915 1.4e-130 470.3 336 66.1
FAN14G0097 Fragaria x ananassa HOM05D003641 ORTHO05D004915 1.4e-130 470.3 336 66.1
Sabra16G0062900 Salix brachista HOM05D003641 ORTHO05D004915 2.3e-130 469.5 328 68.6
Potri.006G194400 Populus trichocarpa HOM05D003641 ORTHO05D004915 3.9e-130 468.8 327 68.2
CSS0018208 Camellia sinensis var. sinensis HOM05D003641 ORTHO05D004915 5.1e-130 468.4 334 68.0
vmacro07894 Vaccinium macrocarpon HOM05D003641 ORTHO05D004915 5.1e-130 468.4 336 67.6
Atru.chr8.1148 Acer truncatum HOM05D003641 ORTHO05D004915 6.7e-130 468.0 333 67.6
Haze_20012 Corylus avellana HOM05D003641 ORTHO05D004915 1.5e-129 466.8 335 65.1
Potri.016G060100 Populus trichocarpa HOM05D003641 ORTHO05D004915 2.0e-129 466.5 335 69.3
MD14G1054700 Malus domestica HOM05D003641 ORTHO05D004915 3.3e-129 465.7 337 64.7
CsaV3_3G038670 Cucumis sativus L. HOM05D003641 ORTHO05D004915 4.4e-129 465.3 341 65.1
C05p55760 Brassica napus HOM05D003641 ORTHO05D004915 7.4e-129 464.5 335 66.9
Duzib093G1627 Durio zibethinus HOM05D003641 ORTHO05D004915 9.7e-129 464.2 338 66.0
FAN05G2657 Fragaria x ananassa HOM05D003641 ORTHO05D004915 9.7e-129 464.2 334 65.0
Cfa020150 Carpinus fangiana HOM05D003641 ORTHO05D004915 1.3e-128 463.8 335 64.5
AT3G12050 Arabidopsis thaliana HOM05D003641 ORTHO05D004915 1.7e-128 463.4 346 64.5
Cc06_g15710 Coffea canephora HOM05D003641 ORTHO05D004915 1.7e-128 463.4 339 66.7
Sed0007356 Sechium edule HOM05D003641 ORTHO05D004915 1.7e-128 463.4 341 64.5
AL3G23660 Arabidopsis lyrata HOM05D003641 ORTHO05D004915 2.2e-128 463.0 346 63.6
BraA05t22525Z Brassica rapa HOM05D003641 ORTHO05D004915 2.2e-128 463.0 336 65.8
Ciclev10012043m.g Citrus clementina HOM05D003641 ORTHO05D004915 2.2e-128 463.0 347 64.8
FAN09G3507 Fragaria x ananassa HOM05D003641 ORTHO05D004915 2.2e-128 463.0 334 64.7
Hund24813 Selenicereus undatus HOM05D003641 ORTHO05D004915 2.8e-128 462.6 336 64.0
BcaB06g25550 Brassica carinata HOM05D003641 ORTHO05D004915 3.7e-128 462.2 336 66.4
Duzib128G0491 Durio zibethinus HOM05D003641 ORTHO05D004915 4.8e-128 461.8 341 63.9
FAN02G1826 Fragaria x ananassa HOM05D003641 ORTHO05D004915 4.8e-128 461.8 334 64.4
Sc13g0002360 Simmondsia chinensis HOM05D003641 ORTHO05D004915 4.8e-128 461.8 335 66.3
ClCG10G017650 Citrullus lanatus HOM05D003641 ORTHO05D004915 6.3e-128 461.5 337 65.0
MBI19_g17419_MAGBIO Magnolia biondii HOM05D003641 ORTHO05D004915 6.3e-128 461.5 334 65.3
Rhsim03G0004900 Rhododendron simsii HOM05D003641 ORTHO05D004915 6.3e-128 461.5 338 66.3
AUR62011998 Chenopodium quinoa HOM05D003641 ORTHO05D004915 1.1e-127 460.7 342 64.6
DCAR_017036 Daucus carota HOM05D003641 ORTHO05D004915 1.1e-127 460.7 341 66.3
RcHm_v2.0_Chr3g0479291 Rosa chinensis HOM05D003641 ORTHO05D004915 1.4e-127 460.3 336 65.2
EL10Ac3g06892 Beta vulgaris HOM05D003641 ORTHO05D004915 1.8e-127 459.9 344 64.2
CiPaw.09G029000 Carya illinoinensis HOM05D003641 ORTHO05D004915 1.8e-127 459.9 337 64.1
TAR633G0428 Trochodendron aralioides HOM05D003641 ORTHO05D004915 1.8e-127 459.9 334 65.3
Thhalv10021006m.g Eutrema salsugineum HOM05D003641 ORTHO05D004915 5.3e-127 458.4 345 64.6
Hma1.2p1_0676F.1_g201930 Hydrangea macrophylla HOM05D003641 ORTHO05D004915 5.3e-127 458.4 327 67.6
Ah.04g152830 Amaranthus hybridus HOM05D003641 ORTHO05D004915 9.1e-127 457.6 331 64.4
MELO3C009611.2 Cucumis melo HOM05D003641 ORTHO05D004915 9.1e-127 457.6 344 64.5
CANSAT64G0207 Cannabis sativa HOM05D003641 ORTHO05D004915 1.2e-126 457.2 344 63.7
COL.COLO4_29349 Corchorus olitorius HOM05D003641 ORTHO05D004915 1.2e-126 457.2 337 65.3
Thecc.05G174300 Theobroma cacao HOM05D003641 ORTHO05D004915 1.6e-126 456.8 338 65.4
TAR636G0728 Trochodendron aralioides HOM05D003641 ORTHO05D004915 2.0e-126 456.4 334 65.3
Sp3g10280 Schrenkiella parvula HOM05D003641 ORTHO05D004915 2.6e-126 456.1 345 64.1
A05p37290 Brassica napus HOM05D003641 ORTHO05D004915 3.5e-126 455.7 336 64.9
CARHR086620 Cardamine hirsuta HOM05D003641 ORTHO05D004915 4.5e-126 455.3 345 62.6
Cpa.g.sc85.60 Carica papaya HOM05D003641 ORTHO05D004915 5.9e-126 454.9 342 63.7
ECA248G0025 Erigeron canadensis HOM05D003641 ORTHO05D004915 5.9e-126 454.9 334 65.0
CiPaw.10G025600 Carya illinoinensis HOM05D003641 ORTHO05D004915 1.3e-125 453.8 336 64.0
HanXRQChr01g0010591 Helianthus annuus HOM05D003641 ORTHO05D004915 1.3e-125 453.8 337 65.9
THA.LOC104826776 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 1.3e-125 453.8 340 63.8
Gohir.D04G089500 Gossypium hirsutum HOM05D003641 ORTHO05D004915 2.2e-125 453.0 342 63.2
Lsat_1_v5_gn_5_164500 Lactuca sativa HOM05D003641 ORTHO05D004915 2.2e-125 453.0 334 65.0
AUR62015343 Chenopodium quinoa HOM05D003641 ORTHO05D004915 2.9e-125 452.6 334 64.4
Lj1g0002782 Lotus japonicus HOM05D003641 ORTHO05D004915 2.9e-125 452.6 335 62.7
Gohir.A04G051900 Gossypium hirsutum HOM05D003641 ORTHO05D004915 3.8e-125 452.2 340 63.8
Gorai.012G099600 Gossypium raimondii HOM05D003641 ORTHO05D004915 6.5e-125 451.4 342 62.9
PGR004G2452 Punica granatum HOM05D003641 ORTHO05D004915 6.5e-125 451.4 339 64.0
MD12G1055300 Malus domestica HOM05D003641 ORTHO05D004915 8.5e-125 451.1 336 64.6
Carub.0003s1139 Capsella rubella HOM05D003641 ORTHO05D004915 1.9e-124 449.9 348 63.2
Eucgr.A02465 Eucalyptus grandis HOM05D003641 ORTHO05D004915 1.9e-124 449.9 343 62.1
Lju124A24T32 Lonicera japonica HOM05D003641 ORTHO05D004915 5.5e-124 448.4 334 65.6
Nitab4.5_0001137g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.6e-123 446.8 337 64.7
QL07p024293 Quercus lobata HOM05D003641 ORTHO05D004915 2.1e-123 446.4 351 63.0
THA.LOC104809934 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 2.1e-123 446.4 337 63.5
CDE11G0833 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 2.7e-123 446.0 334 62.6
Prupe.7G080100 Prunus persica HOM05D003641 ORTHO05D004915 6.1e-123 444.9 339 62.8
Glyma.03G146100 Glycine max HOM05D003641 ORTHO05D004915 8.0e-123 444.5 342 62.0
Dinv24057 Davidia involucrata HOM05D003641 ORTHO05D004915 1.0e-122 444.1 338 63.6
Psat3g067000 Pisum sativum HOM05D003641 ORTHO05D004915 1.0e-122 444.1 333 63.4
BolC5t34243H Brassica oleracea HOM05D003641 ORTHO05D004915 1.4e-122 443.7 378 59.3
Nitab4.5_0000105g0210 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.8e-122 443.4 343 63.6
CDE05G2508 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 2.3e-122 443.0 334 62.3
arahy.Tifrunner.gnm1.ann1.G8NWJQ Arachis hypogaea HOM05D003641 ORTHO05D004915 6.7e-122 441.4 345 62.0
arahy.Tifrunner.gnm1.ann1.86C462 Arachis hypogaea HOM05D003641 ORTHO05D004915 1.5e-121 440.3 345 62.0
Ca_12045_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.5e-121 440.3 335 62.1
TPR.G30301 Trifolium pratense HOM05D003641 ORTHO05D004915 1.5e-121 440.3 335 63.0
Glyma.19G149300 Glycine max HOM05D003641 ORTHO05D004915 3.3e-121 439.1 340 62.6
Ca_08533_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 5.7e-121 438.3 344 59.9
Glyma.09G109200 Glycine max HOM05D003641 ORTHO05D004915 1.3e-120 437.2 335 62.4
Lj5g0013930 Lotus japonicus HOM05D003641 ORTHO05D004915 1.3e-120 437.2 343 62.4
ATR0598G178 Amborella trichopoda HOM05D003641 ORTHO05D004915 4.8e-120 435.3 334 62.3
VMungo1383G0826 Vigna mungo HOM05D003641 ORTHO05D004915 1.1e-119 434.1 341 62.2
Phvul.001G143800 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 5.3e-119 431.8 346 60.4
Nitab4.5_0002343g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 7.0e-119 431.4 334 63.5
Aqoxy1G00140 Aquilegia oxysepala HOM05D003641 ORTHO05D004915 9.1e-119 431.0 341 61.6
Medtr7g093500 Medicago truncatula HOM05D003641 ORTHO05D004915 2.0e-118 429.9 340 60.3
PSO135G0566 Papaver somniferum HOM05D003641 ORTHO05D004915 4.5e-118 428.7 341 60.1
VMungo0720G0815 Vigna mungo HOM05D003641 ORTHO05D004915 1.0e-117 427.6 338 60.7
Hund19209 Selenicereus undatus HOM05D003641 ORTHO05D004915 1.3e-117 427.2 336 60.7
Os08g0464000 Oryza sativa ssp. japonica HOM05D003641 ORTHO05D004915 2.2e-117 426.4 344 60.5
Phvul.007G261100 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 2.9e-117 426.0 337 60.8
Medtr0136s0060 Medicago truncatula HOM05D003641 ORTHO05D004915 6.5e-117 424.9 335 60.0
Glyma.02G171100 Glycine max HOM05D003641 ORTHO05D004915 1.1e-116 424.1 338 61.8
PSO724G0609 Papaver somniferum HOM05D003641 ORTHO05D004915 1.1e-116 424.1 344 59.0
Zm00001eb037640 Zea mays HOM05D003641 ORTHO05D004915 1.5e-116 423.7 337 61.1
HPP92_005766 Vanilla planifolia HOM05D003641 ORTHO05D004915 6.1e-115 418.3 348 58.3
Lalb_Chr18g0047991 Lupinus albus HOM05D003641 ORTHO05D004915 2.3e-114 416.4 343 58.3
BcaC05g29294 Brassica carinata HOM05D003641 ORTHO05D004915 4.0e-114 415.6 335 61.8
HPP92_009321 Vanilla planifolia HOM05D003641 ORTHO05D004915 9.8e-113 411.0 345 58.3
Zm00001eb177410 Zea mays HOM05D003641 ORTHO05D004915 2.4e-111 406.4 345 58.3
SMO203G0054 Selaginella moellendorffii HOM05D003641 ORTHO05D004915 3.2e-108 396.0 334 56.6
Pp3c9_15400 Physcomitrium patens HOM05D003641 ORTHO05D004915 1.4e-106 390.6 340 56.2
Mapoly0109s0023 Marchantia polymorpha HOM05D003641 ORTHO05D004915 2.3e-106 389.8 340 57.6
AagrBONN_evm.TU.Sc2ySwM_344.3694 Anthoceros agrestis HOM05D003641 ORTHO05D004915 2.6e-105 386.3 334 54.5
Pp3c15_21400 Physcomitrium patens HOM05D003641 ORTHO05D004915 2.8e-104 382.9 338 53.0
Psat6g123080 Pisum sativum HOM05D003641 ORTHO05D004915 1.4e-103 380.6 291 61.2
Nn7g35972 Nelumbo nucifera HOM05D003641 ORTHO05D004915 6.1e-99 365.2 292 59.2
Nn7g35971 Nelumbo nucifera HOM05D003641 ORTHO05D004915 2.0e-97 360.1 275 61.8
TPR.G35793 Trifolium pratense HOM05D003641 ORTHO05D004915 5.6e-92 342.0 289 59.2
Gorai.012G099500 Gossypium raimondii HOM05D003641 ORTHO05D004915 3.6e-91 339.3 327 52.9
Actinidia22049 Actinidia chinensis HOM05D003641 ORTHO05D004915 4.9e-88 328.9 335 51.3
Actinidia14376 Actinidia chinensis HOM05D003641 ORTHO05D004915 3.6e-83 312.8 312 55.4
GSVIVG01033476001 Vitis vinifera HOM05D003641 ORTHO05D004915 8.1e-83 311.6 334 51.8
SEGI_39925 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 1.3e-64 251.1 272 47.1
PRCOL_00005901 Prasinoderma coloniale HOM05D003641 ORTHO05D004915 6.4e-64 248.8 328 39.0
Gohir.D04G089400 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.3e-61 241.1 204 59.3
MCO07G236 Micromonas commoda HOM05D003641 ORTHO05D004915 2.4e-58 230.3 332 39.5
BcaC09g48210 Brassica carinata HOM05D003641 ORTHO05D004915 3.1e-58 229.9 229 53.7
Gohir.A04G052000 Gossypium hirsutum HOM05D003641 ORTHO05D004915 6.4e-56 222.2 178 62.9
Gohir.A04G052026 Gossypium hirsutum HOM05D003641 ORTHO05D004915 3.5e-54 216.5 153 64.1
arahy.Tifrunner.gnm1.ann1.EPN7T6 Arachis hypogaea HOM05D003641 ORTHO05D004915 1.3e-48 198.0 141 66.0
Cre03.g199300 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D004915 2.9e-48 196.8 335 34.9
arahy.Tifrunner.gnm1.ann1.VQQW03 Arachis hypogaea HOM05D003641 ORTHO05D004915 5.8e-41 172.6 114 70.2
Actinidia32404 Actinidia chinensis HOM05D003641 ORTHO05D004915 3.8e-40 169.9 103 74.8
SEGI_05882 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 6.3e-35 152.5 195 45.1
Glyma.09G095600 Glycine max HOM05D003641 ORTHO05D004915 3.6e-30 136.7 130 58.5
Ca_31327_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 6.1e-30 136.0 81 69.1
Ca_14569_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.3e-29 134.8 81 69.1
Ca_20435_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 3.0e-29 133.7 81 67.9
Ca_09720_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.6e-27 127.9 81 65.4
Hund07686 Selenicereus undatus HOM05D003641 ORTHO05D011049 5.3e-26 122.9 184 38.6
arahy.Tifrunner.gnm1.ann1.20Y790 Arachis hypogaea HOM05D003641 ORTHO05D004915 2.6e-25 120.6 106 56.6
HanXRQChr03g0083061 Helianthus annuus HOM05D003641 ORTHO05D004915 2.6e-25 120.6 135 42.2
Hund07687 Selenicereus undatus HOM05D003641 ORTHO05D021213 2.5e-23 114.0 187 38.5
SGA_v2.0_scaffold200G41266 Striga asiatica HOM05D037212 ORTHO05D027013 1.8e-18 97.8 73 64.4
EL10Ac8g19334 Beta vulgaris HOM05D003641 ORTHO05D027013 2.2e-16 90.9 71 54.9
arahy.Tifrunner.gnm1.ann1.XYD4PT Arachis hypogaea HOM05D003641 ORTHO05D038899 8.5e-16 89.0 76 55.3
Ca_03268_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.6e-14 84.7 55 67.3
MCO11G399 Micromonas commoda HOM05D003641 ORTHO05D044219 1.6e-14 84.7 141 31.2
BolC1t05367H Brassica oleracea HOM05D003641 ORTHO05D038899 8.8e-13 79.0 63 58.7
Cre08.g358539 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D044219 8.8e-13 79.0 146 30.8
SGA_v2.0_scaffold196G40950 Striga asiatica HOM05D003641 ORTHO05D403144 7.4e-12 75.9 54 64.8
Ca_12039_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.3e-11 75.1 47 72.3
Ca_20824_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.7e-11 74.7 35 80.0
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.8e-10 71.2 181 31.5
Dinv18651 Davidia involucrata HOM05D003641 ORTHO05D004915 1.2e-09 68.6 51 60.8
Nn8g39306 Nelumbo nucifera HOM05D003641 ORTHO05D004915 2.0e-09 67.8 49 63.3
Dinv18648 Davidia involucrata HOM05D003641 ORTHO05D004915 5.9e-09 66.2 46 63.0
Dinv26263 Davidia involucrata HOM05D003641 ORTHO05D004915 5.9e-09 66.2 46 63.0
VMungo0464G0530 Vigna mungo HOM05D003641 ORTHO05D004915 6.5e-08 62.8 68 45.6
PGSC0003DMG400035352 Solanum tuberosum HOM05D003641 ORTHO05D004915 8.5e-08 62.4 84 42.9
SGA_v2.0_scaffold373G50208 Striga asiatica HOM05D003641 ORTHO05D404367 8.5e-08 62.4 46 69.6
CBR_g18730 Chara braunii HOM05D003641 ORTHO05D004915 3.2e-07 60.5 46 60.9
Sopen02g001110 Solanum pennellii HOM05D003641 ORTHO05D004915 9.4e-07 58.9 94 37.2
Peaxi162Scf00003g04539 Petunia axillaris HOM05D000312 ORTHO05D000221 1.2e-06 58.5 49 53.1


User provided reference genes

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