Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_746.g26730 Utricularia gibba HOM05D007156 ORTHO05D003871 3.6e-58 228.0 115 100.0
unitig_899.g15247 Utricularia gibba HOM05D007156 ORTHO05D003871 6.0e-37 157.5 109 75.2
Migut.M00380 Erythranthe guttata HOM05D007156 ORTHO05D003871 7.9e-21 104.0 119 48.7
MSTRG.6540 Avicennia marina HOM05D007156 ORTHO05D003871 5.0e-15 84.7 116 50.9
Manes.12G077701 Manihot esculenta HOM05D007156 ORTHO05D003871 5.0e-15 84.7 117 43.6
CSS0000680 Camellia sinensis var. sinensis HOM05D007156 ORTHO05D003871 4.2e-14 81.6 117 44.4
Glyma.06G301200 Glycine max HOM05D007156 ORTHO05D003871 7.2e-14 80.9 70 62.9
Phvul.011G107900 Phaseolus vulgaris HOM05D007156 ORTHO05D003871 2.1e-13 79.3 126 41.3
TPR.G19047 Trifolium pratense HOM05D007156 ORTHO05D003871 2.1e-13 79.3 83 49.4
Lj3g0000666 Lotus japonicus HOM05D007156 ORTHO05D003871 4.6e-13 78.2 85 54.1
VMungo1127G0041 Vigna mungo HOM05D007156 ORTHO05D003871 6.1e-13 77.8 53 69.8
Glyma.12G103200 Glycine max HOM05D007156 ORTHO05D003871 7.9e-13 77.4 101 46.5
Hma1.2p1_0712F.1_g207550 Hydrangea macrophylla HOM05D007156 ORTHO05D003871 1.4e-12 76.6 88 55.7
TAR271G0004 Trochodendron aralioides HOM05D007156 ORTHO05D003871 1.8e-12 76.3 51 72.5
Actinidia12482 Actinidia chinensis HOM05D007156 ORTHO05D003871 2.3e-12 75.9 76 53.9
MBI02_g42365_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 3.0e-12 75.5 52 71.2
MBI02_g43089_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 3.0e-12 75.5 52 71.2
Phvul.005G111100 Phaseolus vulgaris HOM05D007156 ORTHO05D003871 3.0e-12 75.5 123 37.4
Cpa.g.sc34.47 Carica papaya HOM05D007156 ORTHO05D003871 6.7e-12 74.3 94 48.9
MBI18_g20355_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 6.7e-12 74.3 101 46.5
COL.COLO4_13040 Corchorus olitorius HOM05D007156 ORTHO05D003871 8.8e-12 73.9 72 59.7
Psat7g163320 Pisum sativum HOM05D007156 ORTHO05D003871 8.8e-12 73.9 89 46.1
Potri.019G125100 Populus trichocarpa HOM05D007156 ORTHO05D003871 8.8e-12 73.9 63 60.3
Sabra19G0131200 Salix brachista HOM05D007156 ORTHO05D003871 8.8e-12 73.9 41 80.5
CAN.G86.35 Capsicum annuum HOM05D007156 ORTHO05D003871 1.1e-11 73.6 79 55.7
QL08p034497 Quercus lobata HOM05D007156 ORTHO05D003871 1.1e-11 73.6 75 57.3
Sabra19G0123400 Salix brachista HOM05D007156 ORTHO05D003871 1.1e-11 73.6 50 72.0
CiPaw.04G120100 Carya illinoinensis HOM05D007156 ORTHO05D003871 1.5e-11 73.2 66 65.2
Medtr0945s0020 Medicago truncatula HOM05D007156 ORTHO05D003871 1.5e-11 73.2 53 64.2
MBI02_g42366_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 2.0e-11 72.8 58 63.8
MBI02_g43088_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 2.0e-11 72.8 58 63.8
Nitab4.5_0009996g0020 Nicotiana tabacum HOM05D007156 ORTHO05D003871 2.0e-11 72.8 74 56.8
Ciclev10017232m.g Citrus clementina HOM05D007156 ORTHO05D003871 2.5e-11 72.4 51 72.5
PGSC0003DMG400026188 Solanum tuberosum HOM05D007156 ORTHO05D003871 2.5e-11 72.4 113 45.1
Peaxi162Scf00012g00273 Petunia axillaris HOM05D007156 ORTHO05D003871 3.3e-11 72.0 87 50.6
Potri.013G152300 Populus trichocarpa HOM05D007156 ORTHO05D003871 3.3e-11 72.0 69 59.4
Atru.chr6.3108 Acer truncatum HOM05D007156 ORTHO05D003871 4.3e-11 71.6 99 46.5
Lalb_Chr24g0393601 Lupinus albus HOM05D007156 ORTHO05D003871 4.3e-11 71.6 105 42.9
VMungo1080G0311 Vigna mungo HOM05D007156 ORTHO05D003871 4.3e-11 71.6 103 40.8
Lj3g0015957 Lotus japonicus HOM05D007156 ORTHO05D003871 5.7e-11 71.2 112 42.0
Sed0007405 Sechium edule HOM05D007156 ORTHO05D003871 5.7e-11 71.2 49 75.5
Thecc.02G165500 Theobroma cacao HOM05D007156 ORTHO05D003871 5.7e-11 71.2 68 58.8
Dinv18559 Davidia involucrata HOM05D007156 ORTHO05D003871 7.4e-11 70.9 111 40.5
Haze_12992 Corylus avellana HOM05D007156 ORTHO05D003871 9.7e-11 70.5 75 56.0
arahy.Tifrunner.gnm1.ann1.ABE34K Arachis hypogaea HOM05D007156 ORTHO05D003871 1.3e-10 70.1 74 55.4
Glyma.13G304200 Glycine max HOM05D007156 ORTHO05D003871 1.3e-10 70.1 70 51.4
Prupe.3G223500 Prunus persica HOM05D007156 ORTHO05D003871 2.2e-10 69.3 52 67.3
Cfa014479 Carpinus fangiana HOM05D007156 ORTHO05D003871 2.8e-10 68.9 73 54.8
ClCG02G001520 Citrullus lanatus HOM05D007156 ORTHO05D003871 2.8e-10 68.9 54 68.5
Solyc07g052990.1 Solanum lycopersicum HOM05D007156 ORTHO05D003871 3.7e-10 68.6 60 58.3
Sopen07g026540 Solanum pennellii HOM05D007156 ORTHO05D003871 6.3e-10 67.8 108 43.5
PGSC0003DMG400013754 Solanum tuberosum HOM05D007156 ORTHO05D003871 6.3e-10 67.8 55 61.8
SGA_v2.0_scaffold70G23435 Striga asiatica HOM05D007156 ORTHO05D003871 6.3e-10 67.8 125 40.8
Sabra13G0122400 Salix brachista HOM05D007156 ORTHO05D003871 8.2e-10 67.4 53 62.3
Nitab4.5_0001302g0030 Nicotiana tabacum HOM05D007156 ORTHO05D003871 1.1e-09 67.0 62 59.7
CsaV3_7G003930 Cucumis sativus L. HOM05D007156 ORTHO05D003871 1.4e-09 66.6 63 61.9
FvH4_6g43890 Fragaria vesca HOM05D007156 ORTHO05D003871 1.8e-09 66.2 70 57.1
FAN02G1242 Fragaria x ananassa HOM05D007156 ORTHO05D003871 1.8e-09 66.2 70 57.1
FAN05G2387 Fragaria x ananassa HOM05D007156 ORTHO05D003871 1.8e-09 66.2 70 57.1
FAN09G0550 Fragaria x ananassa HOM05D007156 ORTHO05D003871 1.8e-09 66.2 70 57.1
FAN14G5947 Fragaria x ananassa HOM05D007156 ORTHO05D003871 1.8e-09 66.2 70 57.1
Solyc12g005690.1 Solanum lycopersicum HOM05D007156 ORTHO05D003871 2.4e-09 65.9 75 49.3
Psat5g266920 Pisum sativum HOM05D007156 ORTHO05D003871 4.1e-09 65.1 50 60.0
Rhsim06G0154900 Rhododendron simsii HOM05D007156 ORTHO05D003871 4.1e-09 65.1 36 83.3
RcHm_v2.0_Chr2g0160641 Rosa chinensis HOM05D007156 ORTHO05D003871 4.1e-09 65.1 104 41.3
Eucgr.A01740 Eucalyptus grandis HOM05D007156 ORTHO05D003871 6.9e-09 64.3 50 66.0
CsaV3_6G012600 Cucumis sativus L. HOM05D007156 ORTHO05D003871 9.1e-09 63.9 63 55.6
MBI18_g38397_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 1.2e-08 63.5 44 72.7
Nn2g11286 Nelumbo nucifera HOM05D007156 ORTHO05D003871 1.2e-08 63.5 51 54.9
Sed0001937 Sechium edule HOM05D007156 ORTHO05D003871 1.5e-08 63.2 50 66.0
CiPaw.03G165400 Carya illinoinensis HOM05D007156 ORTHO05D003871 3.4e-08 62.0 73 53.4
MD09G1127500 Malus domestica HOM05D007156 ORTHO05D003871 3.4e-08 62.0 109 39.4
Sed0003235 Sechium edule HOM05D007156 ORTHO05D003871 3.4e-08 62.0 52 59.6
ATR0804G053 Amborella trichopoda HOM05D007156 ORTHO05D003871 5.9e-08 61.2 51 52.9
CSS0048777 Camellia sinensis var. sinensis HOM05D007156 ORTHO05D003871 5.9e-08 61.2 43 62.8
Ca_01559_v3 Cicer arietinum L. HOM05D007156 ORTHO05D003871 5.9e-08 61.2 48 64.6
Peaxi162Scf00007g00157 Petunia axillaris HOM05D007156 ORTHO05D003871 5.9e-08 61.2 74 51.4
MD09G1102100 Malus domestica HOM05D007156 ORTHO05D003871 7.7e-08 60.8 69 52.2
Dinv17859 Davidia involucrata HOM05D001601 ORTHO05D006936 1.0e-07 60.5 50 54.0
Gohir.A04G106700 Gossypium hirsutum HOM05D007156 ORTHO05D003871 1.0e-07 60.5 101 40.6
Gorai.012G132600 Gossypium raimondii HOM05D007156 ORTHO05D003871 1.7e-07 59.7 97 41.2
Rhsim02G0116500 Rhododendron simsii HOM05D007156 ORTHO05D003871 1.7e-07 59.7 74 45.9
TPR.G18057 Trifolium pratense HOM05D007156 ORTHO05D003871 1.7e-07 59.7 69 50.7
TAR633G1059 Trochodendron aralioides HOM05D007866 ORTHO05D003871 2.2e-07 59.3 37 70.3
ClCG02G011170 Citrullus lanatus HOM05D007156 ORTHO05D003871 2.9e-07 58.9 87 43.7
Duzib160G0418 Durio zibethinus HOM05D001601 ORTHO05D006936 2.9e-07 58.9 56 51.8
Dinv18957 Davidia involucrata HOM05D007156 ORTHO05D003871 3.8e-07 58.5 50 54.0
Sed0027672 Sechium edule HOM05D007866 ORTHO05D003871 3.8e-07 58.5 69 49.3
CSS0008619 Camellia sinensis var. sinensis HOM05D007156 ORTHO05D003871 6.5e-07 57.8 43 62.8
Nitab4.5_0008116g0010 Nicotiana tabacum HOM05D007866 ORTHO05D003871 8.5e-07 57.4 58 50.0
Nitab4.5_0000362g0160 Nicotiana tabacum HOM05D007866 ORTHO05D003871 1.4e-06 56.6 58 50.0
Sopen09g006160 Solanum pennellii HOM05D007866 ORTHO05D003871 1.4e-06 56.6 50 56.0
Gohir.A01G221050 Gossypium hirsutum HOM05D007866 ORTHO05D003871 1.9e-06 56.2 39 61.5
Gohir.D01G209950 Gossypium hirsutum HOM05D007866 ORTHO05D003871 1.9e-06 56.2 39 61.5
Gorai.002G255600 Gossypium raimondii HOM05D007866 ORTHO05D003871 1.9e-06 56.2 39 61.5
PGSC0003DMG400037339 Solanum tuberosum HOM05D007866 ORTHO05D003871 1.9e-06 56.2 49 57.1
CSS0043735 Camellia sinensis var. sinensis HOM05D007156 ORTHO05D003871 2.5e-06 55.8 86 36.0
Oeu030552.1 Olea europaea HOM05D007866 ORTHO05D003871 2.5e-06 55.8 48 58.3
RcHm_v2.0_Chr3g0464671 Rosa chinensis HOM05D007866 ORTHO05D003871 2.5e-06 55.8 71 45.1
Solyc09g011430.1 Solanum lycopersicum HOM05D007866 ORTHO05D003871 2.5e-06 55.8 74 45.9
CiPaw.09G201000 Carya illinoinensis HOM05D007866 ORTHO05D003871 3.2e-06 55.5 40 62.5
THA.LOC104816660 Tarenaya hassleriana HOM05D007866 ORTHO05D003871 3.2e-06 55.5 79 44.3
CSS0047873 Camellia sinensis var. sinensis HOM05D007866 ORTHO05D003871 4.2e-06 55.1 42 54.8
FvH4_6g12750 Fragaria vesca HOM05D007866 ORTHO05D003871 4.2e-06 55.1 43 55.8
FAN14G2102 Fragaria x ananassa HOM05D007866 ORTHO05D003871 4.2e-06 55.1 43 55.8
Gohir.A03G162600 Gossypium hirsutum HOM05D007156 ORTHO05D003871 4.2e-06 55.1 114 39.5
Gorai.005G208200 Gossypium raimondii HOM05D007156 ORTHO05D003871 4.2e-06 55.1 114 39.5
Lj3g0011949 Lotus japonicus HOM05D007866 ORTHO05D003871 4.2e-06 55.1 35 68.6
Lalb_Chr07g0193271 Lupinus albus HOM05D007866 ORTHO05D003871 4.2e-06 55.1 38 63.2
Os07g0549100 Oryza sativa ssp. japonica HOM05D052182 ORTHO05D003871 4.2e-06 55.1 55 50.9
FAN05G4429 Fragaria x ananassa HOM05D007866 ORTHO05D003871 5.5e-06 54.7 43 55.8
FAN09G3925 Fragaria x ananassa HOM05D007866 ORTHO05D003871 5.5e-06 54.7 43 55.8
Potri.004G029700 Populus trichocarpa HOM05D012748 ORTHO05D014783 5.5e-06 54.7 75 45.3
Nitab4.5_0005140g0010 Nicotiana tabacum HOM05D007156 ORTHO05D003871 7.2e-06 54.3 36 63.9
Atru.chr8.2088 Acer truncatum HOM05D007866 ORTHO05D003871 9.4e-06 53.9 35 65.7
Lsat_1_v5_gn_8_130461 Lactuca sativa HOM05D025642 ORTHO05D003871 9.4e-06 53.9 37 64.9
SalBow4G1352 Salvia bowleyana HOM05D007866 ORTHO05D003871 9.4e-06 53.9 68 39.7
unitig_744.g24528 Utricularia gibba HOM05D004209 ORTHO05D004970 9.4e-06 53.9 63 44.4


User provided reference genes

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