Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_746.g26715 Utricularia gibba HOM05D005166 ORTHO05D006120 0.0e+00 1171.4 663 100.0
MSTRG.21221 Avicennia marina HOM05D005166 ORTHO05D006120 8.5e-51 206.1 160 73.1
Rhsim13G0077000 Rhododendron simsii HOM05D005166 ORTHO05D006120 7.2e-50 203.0 162 67.3
Dinv34287 Davidia involucrata HOM05D005166 ORTHO05D006120 1.6e-49 201.8 169 65.1
Cc01_g13350 Coffea canephora HOM05D005166 ORTHO05D006120 1.8e-48 198.4 162 67.9
Dinv17047 Davidia involucrata HOM05D005166 ORTHO05D006120 2.3e-48 198.0 168 64.9
Dinv42991 Davidia involucrata HOM05D005166 ORTHO05D006120 2.3e-48 198.0 168 64.9
Dinv43106 Davidia involucrata HOM05D005166 ORTHO05D006120 2.3e-48 198.0 168 64.9
Gohir.A13G226600 Gossypium hirsutum HOM05D005166 ORTHO05D006120 2.3e-48 198.0 158 67.7
vmacro03027 Vaccinium macrocarpon HOM05D005166 ORTHO05D006120 2.3e-48 198.0 168 65.5
GSVIVG01024906001 Vitis vinifera HOM05D005166 ORTHO05D006120 3.0e-48 197.6 169 63.3
Duzib168G0713 Durio zibethinus HOM05D005166 ORTHO05D006120 5.2e-48 196.8 164 66.5
Gohir.D13G232000 Gossypium hirsutum HOM05D005166 ORTHO05D006120 8.8e-48 196.1 165 66.7
Sc12g0001240 Simmondsia chinensis HOM05D005166 ORTHO05D006120 8.8e-48 196.1 161 65.8
COL.COLO4_18578 Corchorus olitorius HOM05D005166 ORTHO05D006120 1.2e-47 195.7 157 68.2
CSS0046995 Camellia sinensis var. sinensis HOM05D005166 ORTHO05D006120 1.5e-47 195.3 171 64.9
Nn2g11213 Nelumbo nucifera HOM05D005166 ORTHO05D006120 2.6e-47 194.5 158 66.5
Thecc.09G315500 Theobroma cacao HOM05D005166 ORTHO05D006120 2.6e-47 194.5 157 66.9
Nitab4.5_0005248g0020 Nicotiana tabacum HOM05D005166 ORTHO05D006120 3.3e-47 194.1 141 72.3
Potri.009G036900 Populus trichocarpa HOM05D005166 ORTHO05D006120 9.7e-47 192.6 167 64.7
Gorai.013G262700 Gossypium raimondii HOM05D005166 ORTHO05D006120 1.3e-46 192.2 165 66.1
Hma1.2p1_1664F.1_g296420 Hydrangea macrophylla HOM05D005166 ORTHO05D006120 2.2e-46 191.4 169 63.3
Nitab4.5_0001999g0010 Nicotiana tabacum HOM05D005166 ORTHO05D006120 2.2e-46 191.4 141 71.6
ECA247G0723 Erigeron canadensis HOM05D005166 ORTHO05D006120 3.7e-46 190.7 124 76.6
Atru.chr3.3993_Atru.chr3.3994 Acer truncatum HOM05D005166 ORTHO05D006120 1.1e-45 189.1 171 60.2
Eucgr.B02307 Eucalyptus grandis HOM05D005166 ORTHO05D006120 2.4e-45 188.0 165 64.2
Nn2g13459 Nelumbo nucifera HOM05D005166 ORTHO05D006120 3.1e-45 187.6 168 60.7
CAN.G3.46 Capsicum annuum HOM05D005166 ORTHO05D006120 4.1e-45 187.2 162 64.2
Sabra09G0026100 Salix brachista HOM05D005166 ORTHO05D006120 7.0e-45 186.4 167 64.7
Peaxi162Scf00676g00220 Petunia axillaris HOM05D005166 ORTHO05D006120 1.2e-44 185.7 120 78.3
CDE07G0344 Ceratophyllum demersum HOM05D005166 ORTHO05D006120 1.6e-44 185.3 162 62.3
ATR0559G187 Amborella trichopoda HOM05D005166 ORTHO05D006120 3.5e-44 184.1 163 61.3
CiPaw.13G089200 Carya illinoinensis HOM05D005166 ORTHO05D006120 3.5e-44 184.1 167 63.5
Potri.001G244600 Populus trichocarpa HOM05D005166 ORTHO05D006120 3.5e-44 184.1 164 62.2
PGSC0003DMG400027986 Solanum tuberosum HOM05D005166 ORTHO05D006120 3.5e-44 184.1 120 77.5
Ciclev10030390m.g Citrus clementina HOM05D005166 ORTHO05D006120 4.5e-44 183.7 171 62.0
Hund04921 Selenicereus undatus HOM05D005166 ORTHO05D006120 4.5e-44 183.7 137 68.6
Manes.01G169300 Manihot esculenta HOM05D005166 ORTHO05D006120 7.7e-44 183.0 167 62.9
Ah.08g220070 Amaranthus hybridus HOM05D005166 ORTHO05D006120 1.7e-43 181.8 155 63.2
Sed0011931 Sechium edule HOM05D005166 ORTHO05D006120 1.7e-43 181.8 169 59.2
CsaV3_1G034540 Cucumis sativus L. HOM05D005166 ORTHO05D006120 2.9e-43 181.0 155 62.6
HanXRQChr01g0001871 Helianthus annuus HOM05D005166 ORTHO05D006120 2.9e-43 181.0 137 69.3
HanXRQChr08g0237371 Helianthus annuus HOM05D005166 ORTHO05D006120 5.0e-43 180.3 124 72.6
HanXRQChr08g0237471 Helianthus annuus HOM05D005166 ORTHO05D006120 5.0e-43 180.3 124 72.6
Medtr4g064740 Medicago truncatula HOM05D005166 ORTHO05D006120 6.5e-43 179.9 164 58.5
Phvul.011G061700 Phaseolus vulgaris HOM05D005166 ORTHO05D006120 1.5e-42 178.7 164 58.5
Psat7g210320 Pisum sativum HOM05D005166 ORTHO05D006120 2.5e-42 177.9 161 57.8
Solyc09g030390.3 Solanum lycopersicum HOM05D005166 ORTHO05D006120 5.5e-42 176.8 134 69.4
Lsat_1_v5_gn_9_24820 Lactuca sativa HOM05D005166 ORTHO05D006120 7.2e-42 176.4 111 77.5
VMungo1127G2033 Vigna mungo HOM05D005166 ORTHO05D006120 7.2e-42 176.4 165 58.2
Lalb_Chr03g0026441 Lupinus albus HOM05D005166 ORTHO05D006120 9.4e-42 176.0 161 57.1
Sopen09g013470 Solanum pennellii HOM05D005166 ORTHO05D006120 9.4e-42 176.0 134 68.7
Ca_20616_v3 Cicer arietinum L. HOM05D005166 ORTHO05D006120 1.6e-41 175.3 161 56.5
Glyma.12G059700 Glycine max HOM05D005166 ORTHO05D006120 1.6e-41 175.3 168 56.5
PSO339G5769 Papaver somniferum HOM05D005166 ORTHO05D006120 1.6e-41 175.3 131 67.9
Aa31LG5G7110 Aethionema arabicum HOM05D005166 ORTHO05D006120 2.7e-41 174.5 159 60.4
THA.LOC104800686 Tarenaya hassleriana HOM05D005166 ORTHO05D006120 3.6e-41 174.1 119 71.4
Lj3g0025501 Lotus japonicus HOM05D005166 ORTHO05D006120 4.7e-41 173.7 161 56.5
TPR.G23607 Trifolium pratense HOM05D005166 ORTHO05D006120 4.7e-41 173.7 160 57.5
arahy.Tifrunner.gnm1.ann1.L8ZXQA Arachis hypogaea HOM05D005166 ORTHO05D006120 6.1e-41 173.3 161 57.8
Prupe.6G070300 Prunus persica HOM05D005166 ORTHO05D006120 8.0e-41 172.9 158 58.2
TAR636G0138 Trochodendron aralioides HOM05D005166 ORTHO05D006120 8.0e-41 172.9 178 56.7
Lalb_Chr19g0137981 Lupinus albus HOM05D005166 ORTHO05D006120 1.0e-40 172.6 165 57.0
TAR636G0020 Trochodendron aralioides HOM05D005166 ORTHO05D006120 1.0e-40 172.6 171 57.9
Glyma.11G136000 Glycine max HOM05D005166 ORTHO05D006120 1.8e-40 171.8 161 57.1
MD11G1094700 Malus domestica HOM05D005166 ORTHO05D006120 1.8e-40 171.8 162 58.0
Aqoxy2G02310 Aquilegia oxysepala HOM05D005166 ORTHO05D006120 2.3e-40 171.4 159 61.0
Lalb_Chr01g0003471 Lupinus albus HOM05D005166 ORTHO05D006120 2.3e-40 171.4 167 58.1
MD03G1086100 Malus domestica HOM05D005166 ORTHO05D006120 2.3e-40 171.4 158 61.4
EL10Ac7g16070 Beta vulgaris HOM05D005166 ORTHO05D006120 3.0e-40 171.0 110 77.3
Os03g0270200 Oryza sativa ssp. japonica HOM05D005166 ORTHO05D006120 4.0e-40 170.6 123 70.7
MBI14_g11598_MAGBIO Magnolia biondii HOM05D005166 ORTHO05D006120 8.8e-40 169.5 169 57.4
Sed0000001 Sechium edule HOM05D005166 ORTHO05D006120 1.2e-39 169.1 158 60.1
TAR633G1610 Trochodendron aralioides HOM05D005166 ORTHO05D006120 1.2e-39 169.1 166 57.2
Zm00001eb012100 Zea mays HOM05D005166 ORTHO05D006120 1.5e-39 168.7 131 67.2
Cpa.g.sc81.97 Carica papaya HOM05D005166 ORTHO05D006120 2.0e-39 168.3 179 53.6
AL4G23770 Arabidopsis lyrata HOM05D005166 ORTHO05D006120 2.6e-39 167.9 164 55.5
Sabra16G0148400 Salix brachista HOM05D005166 ORTHO05D006120 2.6e-39 167.9 187 51.9
AUR62001736 Chenopodium quinoa HOM05D005166 ORTHO05D006120 5.7e-39 166.8 108 76.9
RcHm_v2.0_Chr5g0066361 Rosa chinensis HOM05D005166 ORTHO05D006120 9.8e-39 166.0 160 58.8
FAN25G3327 Fragaria x ananassa HOM05D005166 ORTHO05D006120 1.3e-38 165.6 127 68.5
QL01p029224 Quercus lobata HOM05D005166 ORTHO05D006120 1.3e-38 165.6 166 57.2
Pp3c3_30240 Physcomitrium patens HOM05D005166 ORTHO05D006120 2.2e-38 164.9 161 55.3
Pp3c3_30241 Physcomitrium patens HOM05D005166 ORTHO05D006120 2.2e-38 164.9 161 55.3
arahy.Tifrunner.gnm1.ann1.SP769B Arachis hypogaea HOM05D005166 ORTHO05D006120 3.7e-38 164.1 175 53.1
SEGI_12829 Sequoiadendron giganteum HOM05D005166 ORTHO05D006120 3.7e-38 164.1 107 74.8
FAN21G1054 Fragaria x ananassa HOM05D005166 ORTHO05D006120 1.1e-37 162.5 160 58.8
FvH4_3g36942 Fragaria vesca HOM05D005166 ORTHO05D006120 1.4e-37 162.2 160 58.8
Sp4g12020 Schrenkiella parvula HOM05D005166 ORTHO05D006120 1.4e-37 162.2 164 54.3
AagrBONN_evm.TU.Sc2ySwM_117.3439 Anthoceros agrestis HOM05D005166 ORTHO05D006120 1.8e-37 161.8 120 67.5
FAN11G2353 Fragaria x ananassa HOM05D005166 ORTHO05D006120 1.8e-37 161.8 160 58.8
Carub.0004s1023 Capsella rubella HOM05D005166 ORTHO05D006120 2.4e-37 161.4 94 80.9
FAN16G3680 Fragaria x ananassa HOM05D005166 ORTHO05D006120 4.1e-37 160.6 160 58.8
HPP92_012608 Vanilla planifolia HOM05D005166 ORTHO05D006120 4.1e-37 160.6 101 74.3
Haze_24170 Corylus avellana HOM05D005166 ORTHO05D006120 5.4e-37 160.2 154 58.4
Haze_24175 Corylus avellana HOM05D005166 ORTHO05D006120 5.4e-37 160.2 154 58.4
AT2G29210 Arabidopsis thaliana HOM05D005166 ORTHO05D006120 7.0e-37 159.8 160 55.0
DCAR_005942 Daucus carota HOM05D005166 ORTHO05D006120 1.2e-36 159.1 168 53.0
Thhalv10016250m.g Eutrema salsugineum HOM05D005166 ORTHO05D006120 1.6e-36 158.7 161 54.7
AUR62020041 Chenopodium quinoa HOM05D005166 ORTHO05D006120 2.7e-36 157.9 95 81.1
Pp3c10_18390 Physcomitrium patens HOM05D005166 ORTHO05D006120 4.5e-36 157.1 159 53.5
SHI05908 Sapria himalayana HOM05D005166 ORTHO05D006120 4.2e-34 150.6 170 47.6
Mapoly0063s0002 Marchantia polymorpha HOM05D005166 ORTHO05D006120 6.1e-33 146.7 92 75.0
C04p21810 Brassica napus HOM05D005166 ORTHO05D006120 8.0e-33 146.4 185 48.6
Migut.D00877 Erythranthe guttata HOM05D005166 ORTHO05D006120 8.0e-33 146.4 811 30.3
BolC4t23701H Brassica oleracea HOM05D005166 ORTHO05D006120 1.0e-32 146.0 159 53.5
CBR_g50691 Chara braunii HOM05D005166 ORTHO05D006120 4.0e-32 144.1 130 56.9
BcaB02g10233 Brassica carinata HOM05D005166 ORTHO05D006120 6.8e-32 143.3 181 48.6
Actinidia33768 Actinidia chinensis HOM05D005166 ORTHO05D006120 1.2e-31 142.5 120 69.2
A05p16120 Brassica napus HOM05D005166 ORTHO05D006120 1.5e-31 142.1 165 54.5
BraA05t20522Z Brassica rapa HOM05D005166 ORTHO05D006120 2.0e-31 141.7 165 54.5
PGR102G2168 Punica granatum HOM05D005166 ORTHO05D006120 2.6e-31 141.4 166 53.0
BcaB05g22029 Brassica carinata HOM05D005166 ORTHO05D006120 3.4e-31 141.0 119 58.8
SHI31247 Sapria himalayana HOM05D005166 ORTHO05D006120 3.4e-31 141.0 128 56.2
SGA_v2.0_scaffold111G31544 Striga asiatica HOM05D005166 ORTHO05D006120 4.4e-31 140.6 796 26.1
SHI33547 Sapria himalayana HOM05D005166 ORTHO05D006120 9.8e-31 139.4 172 45.9
SMO144G0189 Selaginella moellendorffii HOM05D005166 ORTHO05D006120 1.1e-29 136.0 96 70.8
CDE06G0141 Ceratophyllum demersum HOM05D005166 ORTHO05D006120 3.5e-28 131.0 74 81.1
SHI25075 Sapria himalayana HOM05D005166 ORTHO05D006120 8.0e-25 119.8 144 47.9
SHI32778 Sapria himalayana HOM05D005166 ORTHO05D006120 6.0e-20 103.6 90 60.0
SHI07724 Sapria himalayana HOM05D005166 ORTHO05D006120 1.9e-18 98.6 120 44.2
Zm00001eb397830 Zea mays HOM05D005166 ORTHO05D006120 1.6e-17 95.5 82 64.6
MCO11G283 Micromonas commoda HOM05D005166 ORTHO05D006120 3.6e-17 94.4 108 47.2
Zm00001eb284680 Zea mays HOM05D005166 ORTHO05D006120 3.6e-17 94.4 90 62.2
Cre16.g678050 Chlamydomonas reinhardtii HOM05D005166 ORTHO05D006120 4.4e-15 87.4 119 42.9
Zm00001eb222410 Zea mays HOM05D005166 ORTHO05D006120 1.9e-13 82.0 50 78.0


User provided reference genes

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