Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_746.g26690 Utricularia gibba HOM05D004022 ORTHO05D004090 7.7e-36 153.3 78 100.0
unitig_899.g15299 Utricularia gibba HOM05D004022 ORTHO05D004090 7.5e-23 110.2 79 72.2
SalBow8G0217 Salvia bowleyana HOM05D004022 ORTHO05D004090 5.4e-13 77.4 85 55.3
SalBow8G5432 Salvia bowleyana HOM05D004022 ORTHO05D004090 5.4e-13 77.4 85 55.3
Migut.M00652 Erythranthe guttata HOM05D004022 ORTHO05D004090 3.9e-11 71.2 88 52.3
DCAR_021057 Daucus carota HOM05D004022 ORTHO05D004090 2.5e-10 68.6 97 45.4
Peaxi162Scf00111g00083 Petunia axillaris HOM05D004022 ORTHO05D004090 2.5e-10 68.6 98 41.8
Cpa.g.sc2579.1 Carica papaya HOM05D004022 ORTHO05D004090 7.3e-10 67.0 99 42.4
ECA236G3547 Erigeron canadensis HOM05D004022 ORTHO05D004090 7.3e-10 67.0 95 41.1
CAN.G1003.7 Capsicum annuum HOM05D004022 ORTHO05D004090 1.2e-09 66.2 83 48.2
CAN.G904.20 Capsicum annuum HOM05D004022 ORTHO05D004090 1.2e-09 66.2 79 48.1
CSS0036966 Camellia sinensis var. sinensis HOM05D004022 ORTHO05D004090 1.6e-09 65.9 100 44.0
PGR083G0572 Punica granatum HOM05D004022 ORTHO05D004090 2.8e-09 65.1 86 44.2
Migut.M00648 Erythranthe guttata HOM05D004022 ORTHO05D004090 3.6e-09 64.7 104 44.2
Sopen07g029950 Solanum pennellii HOM05D004022 ORTHO05D004090 3.6e-09 64.7 100 42.0
PGSC0003DMG400027649 Solanum tuberosum HOM05D004022 ORTHO05D004090 3.6e-09 64.7 98 42.9
Actinidia35177 Actinidia chinensis HOM05D004022 ORTHO05D004090 8.0e-09 63.5 85 43.5
Migut.M00651 Erythranthe guttata HOM05D004022 ORTHO05D004090 1.0e-08 63.2 102 43.1
DCAR_019636 Daucus carota HOM05D004022 ORTHO05D004090 1.4e-08 62.8 47 68.1
Solyc07g056600.1 Solanum lycopersicum HOM05D004022 ORTHO05D004090 1.4e-08 62.8 100 40.0
CiPaw.09G122900 Carya illinoinensis HOM05D004022 ORTHO05D004090 1.8e-08 62.4 57 59.6
Lsat_1_v5_gn_7_101361 Lactuca sativa HOM05D004022 ORTHO05D004090 1.8e-08 62.4 87 42.5
TAR627G0510 Trochodendron aralioides HOM05D004022 ORTHO05D004090 1.8e-08 62.4 94 45.7
HanXRQChr15g0492271 Helianthus annuus HOM05D004022 ORTHO05D004090 2.3e-08 62.0 100 39.0
Peaxi162Scf00000g00573 Petunia axillaris HOM05D004022 ORTHO05D004090 2.3e-08 62.0 98 42.9
Phvul.005G051400 Phaseolus vulgaris HOM05D004022 ORTHO05D004090 2.3e-08 62.0 84 46.4
Sabra16G0249100 Salix brachista HOM05D004022 ORTHO05D004090 5.2e-08 60.8 113 41.6
Haze_05605 Corylus avellana HOM05D004022 ORTHO05D004090 6.8e-08 60.5 97 40.2
Migut.M00647 Erythranthe guttata HOM05D004022 ORTHO05D004090 6.8e-08 60.5 106 42.5
Medtr2g070550 Medicago truncatula HOM05D004022 ORTHO05D004090 6.8e-08 60.5 71 46.5
Solyc10g007580.1 Solanum lycopersicum HOM05D004022 ORTHO05D004090 6.8e-08 60.5 70 50.0
Sopen10g003500 Solanum pennellii HOM05D004022 ORTHO05D004090 6.8e-08 60.5 70 50.0
arahy.Tifrunner.gnm1.ann1.NFB54Z Arachis hypogaea HOM05D004022 ORTHO05D004090 8.9e-08 60.1 38 78.9
Nitab4.5_0001924g0010 Nicotiana tabacum HOM05D004022 ORTHO05D004090 8.9e-08 60.1 107 38.3
HanXRQChr11g0330361 Helianthus annuus HOM05D004022 ORTHO05D004090 1.2e-07 59.7 107 38.3
Nitab4.5_0000505g0120 Nicotiana tabacum HOM05D004022 ORTHO05D004090 1.5e-07 59.3 90 44.4
THA.LOC104812289 Tarenaya hassleriana HOM05D004022 ORTHO05D004090 1.5e-07 59.3 90 41.1
Eucgr.F01407 Eucalyptus grandis HOM05D004022 ORTHO05D004090 2.0e-07 58.9 103 39.8
Glyma.08G176500 Glycine max HOM05D004022 ORTHO05D004090 2.0e-07 58.9 83 48.2
Glyma.15G249800 Glycine max HOM05D004022 ORTHO05D004090 2.0e-07 58.9 76 47.4
CAN.G262.11 Capsicum annuum HOM05D004022 ORTHO05D004090 2.6e-07 58.5 86 45.3
Rhsim06G0184700 Rhododendron simsii HOM05D004022 ORTHO05D004090 2.6e-07 58.5 83 43.4
arahy.Tifrunner.gnm1.ann1.I20P02 Arachis hypogaea HOM05D004022 ORTHO05D004090 4.4e-07 57.8 38 76.3
BcaB05g25138 Brassica carinata HOM05D004022 ORTHO05D004090 4.4e-07 57.8 45 64.4
Lsat_1_v5_gn_7_101401 Lactuca sativa HOM05D004022 ORTHO05D004090 4.4e-07 57.8 91 38.5
Haze_08493 Corylus avellana HOM05D004022 ORTHO05D004090 5.8e-07 57.4 69 46.4
Eucgr.F01408 Eucalyptus grandis HOM05D004022 ORTHO05D004090 5.8e-07 57.4 44 65.9
Gohir.D10G042200 Gossypium hirsutum HOM05D004022 ORTHO05D004090 5.8e-07 57.4 37 78.4
Gorai.011G044800 Gossypium raimondii HOM05D004022 ORTHO05D004090 5.8e-07 57.4 37 78.4
RcHm_v2.0_Chr5g0027761 Rosa chinensis HOM05D004022 ORTHO05D004090 5.8e-07 57.4 43 69.8
AT1G17147 Arabidopsis thaliana HOM05D004022 ORTHO05D004090 7.5e-07 57.0 97 37.1
MELO3C016156.2 Cucumis melo HOM05D004022 ORTHO05D004090 7.5e-07 57.0 71 43.7
FAN25G3340 Fragaria x ananassa HOM05D004022 ORTHO05D004090 7.5e-07 57.0 48 62.5
THA.LOC104813977 Tarenaya hassleriana HOM05D004022 ORTHO05D004090 7.5e-07 57.0 98 36.7
A07p43670 Brassica napus HOM05D004022 ORTHO05D004090 9.8e-07 56.6 43 65.1
BolC6t40255H Brassica oleracea HOM05D004022 ORTHO05D004090 9.8e-07 56.6 99 37.4
Migut.M00649 Erythranthe guttata HOM05D004022 ORTHO05D004090 9.8e-07 56.6 42 61.9
Gohir.A10G041400 Gossypium hirsutum HOM05D004022 ORTHO05D004090 9.8e-07 56.6 37 78.4
Nitab4.5_0000639g0190 Nicotiana tabacum HOM05D004022 ORTHO05D004090 9.8e-07 56.6 93 44.1
ClCG07G010500 Citrullus lanatus HOM05D004022 ORTHO05D004090 1.3e-06 56.2 70 44.3
ClCG07G010510 Citrullus lanatus HOM05D004022 ORTHO05D004090 1.3e-06 56.2 70 44.3
COL.COLO4_17416 Corchorus olitorius HOM05D004022 ORTHO05D004090 1.3e-06 56.2 47 59.6
FvH4_3g16620 Fragaria vesca HOM05D004022 ORTHO05D004090 1.3e-06 56.2 48 62.5
FAN11G3697 Fragaria x ananassa HOM05D004022 ORTHO05D004090 1.3e-06 56.2 48 62.5
FAN16G3013 Fragaria x ananassa HOM05D004022 ORTHO05D004090 1.3e-06 56.2 48 62.5
FAN21G1087 Fragaria x ananassa HOM05D004022 ORTHO05D004090 1.3e-06 56.2 48 62.5
BcaB03g16016 Brassica carinata HOM05D004022 ORTHO05D004090 1.7e-06 55.8 92 38.0
BcaC08g47415 Brassica carinata HOM05D004022 ORTHO05D004090 1.7e-06 55.8 43 65.1
BraA07t31879Z Brassica rapa HOM05D004022 ORTHO05D004090 1.7e-06 55.8 43 65.1
Sp5g33510 Schrenkiella parvula HOM05D004022 ORTHO05D004090 1.7e-06 55.8 64 54.7
Aa31LG4G2550 Aethionema arabicum HOM05D004022 ORTHO05D004090 2.2e-06 55.5 41 68.3
AL1G29370 Arabidopsis lyrata HOM05D004022 ORTHO05D004090 2.2e-06 55.5 45 60.0
AL2G38780 Arabidopsis lyrata HOM05D004022 ORTHO05D004090 2.2e-06 55.5 43 65.1
BcaC03g15811 Brassica carinata HOM05D004022 ORTHO05D004090 2.2e-06 55.5 43 65.1
A02p22170 Brassica napus HOM05D004022 ORTHO05D004090 2.2e-06 55.5 43 65.1
C02p35580 Brassica napus HOM05D004022 ORTHO05D004090 2.2e-06 55.5 43 65.1
BolC2t09573H Brassica oleracea HOM05D004022 ORTHO05D004090 2.2e-06 55.5 43 65.1
BraA02t07221Z Brassica rapa HOM05D004022 ORTHO05D004090 2.2e-06 55.5 43 65.1
Carub.0002s2531 Capsella rubella HOM05D004022 ORTHO05D004090 2.2e-06 55.5 43 65.1
CsaV3_4G007830 Cucumis sativus L. HOM05D004022 ORTHO05D004090 2.2e-06 55.5 71 43.7
Lalb_Chr25g0285381 Lupinus albus HOM05D004022 ORTHO05D004090 2.2e-06 55.5 40 72.5
Nitab4.5_0005080g0020 Nicotiana tabacum HOM05D004022 ORTHO05D004090 2.2e-06 55.5 102 35.3
BcaB02g07170 Brassica carinata HOM05D004022 ORTHO05D004090 2.9e-06 55.1 40 67.5
BcaC08g45417 Brassica carinata HOM05D004022 ORTHO05D004090 2.9e-06 55.1 100 39.0
C06p30490 Brassica napus HOM05D004022 ORTHO05D004090 2.9e-06 55.1 100 39.0
C06p52350 Brassica napus HOM05D004022 ORTHO05D004090 2.9e-06 55.1 43 65.1
BolC6t38212H Brassica oleracea HOM05D004022 ORTHO05D004090 2.9e-06 55.1 100 39.0
MBI10_g46499_MAGBIO Magnolia biondii HOM05D004022 ORTHO05D004090 2.9e-06 55.1 95 42.1
Potri.011G095900 Populus trichocarpa HOM05D004022 ORTHO05D004090 2.9e-06 55.1 100 41.0
Sopen12g006680 Solanum pennellii HOM05D004022 ORTHO05D004090 2.9e-06 55.1 69 52.2
PGSC0003DMG400007842 Solanum tuberosum HOM05D001023 ORTHO05D000912 2.9e-06 55.1 79 49.4
Thecc.07G146700 Theobroma cacao HOM05D004022 ORTHO05D004090 2.9e-06 55.1 37 73.0
TPR.G26630 Trifolium pratense HOM05D004022 ORTHO05D004090 2.9e-06 55.1 78 48.7
Duzib235G0028 Durio zibethinus HOM05D004022 ORTHO05D004090 3.7e-06 54.7 35 77.1
Thhalv10019550m.g Eutrema salsugineum HOM05D004022 ORTHO05D004090 3.7e-06 54.7 36 75.0
Os02g0251900 Oryza sativa ssp. japonica HOM05D025307 ORTHO05D037069 3.7e-06 54.7 49 55.1
TPR.G2234 Trifolium pratense HOM05D004022 ORTHO05D004090 3.7e-06 54.7 84 38.1
Duzib192G0777 Durio zibethinus HOM05D004022 ORTHO05D004090 4.9e-06 54.3 32 84.4
Lj3g0019101 Lotus japonicus HOM05D004022 ORTHO05D004090 4.9e-06 54.3 38 68.4
BcaB03g13015 Brassica carinata HOM05D004022 ORTHO05D004090 6.4e-06 53.9 40 62.5
A07p27550 Brassica napus HOM05D004022 ORTHO05D004090 6.4e-06 53.9 100 38.0
BraA07t30397Z Brassica rapa HOM05D004022 ORTHO05D004090 6.4e-06 53.9 100 38.0
Gohir.D01G029300 Gossypium hirsutum HOM05D004022 ORTHO05D004090 6.4e-06 53.9 37 67.6
Gorai.002G038600 Gossypium raimondii HOM05D004022 ORTHO05D004090 6.4e-06 53.9 37 67.6
Psat1g075360 Pisum sativum HOM05D004022 ORTHO05D004090 6.4e-06 53.9 56 58.9
Potri.001G378300 Populus trichocarpa HOM05D004022 ORTHO05D004090 6.4e-06 53.9 107 34.6
QL04p070436 Quercus lobata HOM05D004022 ORTHO05D004090 6.4e-06 53.9 46 69.6
RhsimUnG0204300 Rhododendron simsii HOM05D004022 ORTHO05D004090 6.4e-06 53.9 36 66.7
AT1G78410 Arabidopsis thaliana HOM05D004022 ORTHO05D004090 8.3e-06 53.5 43 62.8
CARHR017720 Cardamine hirsuta HOM05D004022 ORTHO05D004090 8.3e-06 53.5 42 61.9
Peaxi162Scf00035g00165 Petunia axillaris HOM05D004022 ORTHO05D004090 8.3e-06 53.5 99 36.4
TWI38G0355 Tripterygium wilfordii HOM05D004022 ORTHO05D004090 8.3e-06 53.5 86 37.2


User provided reference genes

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