Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_746.g26651 Utricularia gibba HOM05D002799 ORTHO05D008889 3.7e-114 414.8 204 100.0
Migut.M01834 Erythranthe guttata HOM05D002799 ORTHO05D008889 7.1e-65 251.1 176 69.9
MSTRG.17884 Avicennia marina HOM05D002799 ORTHO05D008889 4.3e-62 241.9 176 68.2
Actinidia08736 Actinidia chinensis HOM05D002799 ORTHO05D008889 1.8e-60 236.5 175 65.1
DCAR_010548 Daucus carota HOM05D002799 ORTHO05D008889 2.4e-60 236.1 176 67.0
FAN01G1859 Fragaria x ananassa HOM05D002799 ORTHO05D007076 4.5e-59 231.9 195 61.0
Dinv29173 Davidia involucrata HOM05D002799 ORTHO05D008889 5.8e-59 231.5 172 65.7
FvH4_7g33580 Fragaria vesca HOM05D002799 ORTHO05D008889 9.9e-59 230.7 182 64.8
FvH4_7g33591 Fragaria vesca HOM05D002799 ORTHO05D008889 1.3e-58 230.3 182 64.8
FAN03G1078 Fragaria x ananassa HOM05D002799 ORTHO05D007076 2.9e-58 229.2 182 64.3
Nitab4.5_0002229g0090 Nicotiana tabacum HOM05D002799 ORTHO05D008889 2.9e-58 229.2 191 60.2
Eucgr.K03383 Eucalyptus grandis HOM05D002799 ORTHO05D008889 3.8e-58 228.8 174 64.9
FAN10G0267 Fragaria x ananassa HOM05D002799 ORTHO05D007076 3.8e-58 228.8 195 60.5
Nitab4.5_0000207g0420 Nicotiana tabacum HOM05D002799 ORTHO05D008889 3.8e-58 228.8 186 61.3
GSVIVG01024450001 Vitis vinifera HOM05D002799 ORTHO05D008889 1.4e-57 226.9 174 63.8
Sopen10g002540 Solanum pennellii HOM05D002799 ORTHO05D008889 1.9e-57 226.5 186 60.8
Manes.08G164500 Manihot esculenta HOM05D002799 ORTHO05D008889 4.2e-57 225.3 170 66.5
MD07G1305700 Malus domestica HOM05D002799 ORTHO05D008889 1.2e-56 223.8 174 63.2
Prupe.2G323800 Prunus persica HOM05D002799 ORTHO05D008889 1.2e-56 223.8 178 62.4
Cc05_g12950 Coffea canephora HOM05D002799 ORTHO05D008889 2.1e-56 223.0 184 60.9
Rhsim03G0220500 Rhododendron simsii HOM05D000526 ORTHO05D000956 4.6e-56 221.9 174 63.2
SGA_v2.0_scaffold70G23573 Striga asiatica HOM05D002799 ORTHO05D008889 4.6e-56 221.9 169 66.3
Haze_00591 Corylus avellana HOM05D002799 ORTHO05D008889 1.3e-55 220.3 171 65.5
RcHm_v2.0_Chr1g0383841 Rosa chinensis HOM05D002799 ORTHO05D008889 2.3e-55 219.5 173 63.6
PGSC0003DMG400024993 Solanum tuberosum HOM05D002799 ORTHO05D008889 3.0e-55 219.2 170 62.9
CAN.G1110.21 Capsicum annuum HOM05D002799 ORTHO05D008889 5.1e-55 218.4 174 60.3
Ciclev10032834m.g Citrus clementina HOM05D002799 ORTHO05D008889 8.7e-55 217.6 182 60.4
Potri.019G048200 Populus trichocarpa HOM05D002799 ORTHO05D008889 8.7e-55 217.6 175 62.9
ECA236G2689 Erigeron canadensis HOM05D002799 ORTHO05D008889 1.1e-54 217.2 182 59.3
CSS0012005 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 1.9e-54 216.5 177 61.6
CSS0036576 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 1.9e-54 216.5 177 61.6
CiPaw.05G237000 Carya illinoinensis HOM05D002799 ORTHO05D008889 3.3e-54 215.7 171 65.5
QL09p025834 Quercus lobata HOM05D002799 ORTHO05D008889 7.4e-54 214.5 170 64.7
Thecc.04G001600 Theobroma cacao HOM05D002799 ORTHO05D008889 7.4e-54 214.5 174 62.1
THA.LOC104803694 Tarenaya hassleriana HOM05D002799 ORTHO05D008889 1.3e-53 213.8 189 56.6
Sabra19G0057600 Salix brachista HOM05D002799 ORTHO05D008889 1.6e-53 213.4 178 59.6
TAR629G0193 Trochodendron aralioides HOM05D002799 ORTHO05D008889 2.1e-53 213.0 174 60.3
Oeu053393.1 Olea europaea HOM05D002799 ORTHO05D008889 2.8e-53 212.6 163 63.8
MELO3C005426.2 Cucumis melo HOM05D002799 ORTHO05D008889 4.8e-53 211.8 173 59.5
Gorai.007G188000 Gossypium raimondii HOM05D002799 ORTHO05D008889 4.8e-53 211.8 168 63.7
Nn1g02011 Nelumbo nucifera HOM05D002799 ORTHO05D008889 4.8e-53 211.8 175 58.9
Gohir.D11G175400 Gossypium hirsutum HOM05D002799 ORTHO05D008889 6.2e-53 211.5 168 63.7
TWI60G0329 Tripterygium wilfordii HOM05D002799 ORTHO05D008889 8.1e-53 211.1 160 64.4
Gohir.A11G169200 Gossypium hirsutum HOM05D002799 ORTHO05D008889 1.8e-52 209.9 168 63.1
CANSAT21G1155 Cannabis sativa HOM05D002799 ORTHO05D008889 6.9e-52 208.0 170 61.8
vmacro06499 Vaccinium macrocarpon HOM05D002799 ORTHO05D008889 1.5e-51 206.8 158 64.6
CsaV3_5G005340 Cucumis sativus L. HOM05D002799 ORTHO05D008889 1.3e-50 203.8 166 59.6
EL10Ac3g05099 Beta vulgaris HOM05D002799 ORTHO05D008889 1.7e-50 203.4 171 57.3
Sed0001745 Sechium edule HOM05D002799 ORTHO05D008889 1.7e-50 203.4 173 57.8
Lsat_1_v5_gn_8_74380 Lactuca sativa HOM05D002799 ORTHO05D008889 2.9e-50 202.6 176 56.2
Medtr8g063470 Medicago truncatula HOM05D002799 ORTHO05D008889 8.4e-50 201.1 175 58.3
TPR.G670 Trifolium pratense HOM05D002799 ORTHO05D008889 8.4e-50 201.1 172 57.6
Ah.04g157280 Amaranthus hybridus HOM05D002799 ORTHO05D008889 1.1e-49 200.7 183 54.1
Lsat_1_v5_gn_5_146100 Lactuca sativa HOM05D002799 ORTHO05D008889 1.9e-49 199.9 174 55.7
Atru.chr12.2012 Acer truncatum HOM05D002799 ORTHO05D008889 9.3e-49 197.6 189 54.5
AUR62028150 Chenopodium quinoa HOM05D002799 ORTHO05D008889 1.2e-48 197.2 170 57.6
Lalb_Chr09g0335071 Lupinus albus HOM05D002799 ORTHO05D008889 2.1e-48 196.4 167 58.1
Peaxi162Scf00257g00081 Petunia axillaris HOM05D002799 ORTHO05D008889 4.6e-48 195.3 151 62.3
arahy.Tifrunner.gnm1.ann1.LMI616 Arachis hypogaea HOM05D002799 ORTHO05D008889 1.3e-47 193.7 172 54.1
Lj1P1032T28 Lonicera japonica HOM05D002799 ORTHO05D008889 3.0e-47 192.6 154 63.0
arahy.Tifrunner.gnm1.ann1.10QB4Z Arachis hypogaea HOM05D002799 ORTHO05D008889 3.9e-47 192.2 172 54.1
arahy.Tifrunner.gnm1.ann1.B4EAVD Arachis hypogaea HOM05D002799 ORTHO05D008889 5.1e-47 191.8 172 54.1
arahy.Tifrunner.gnm1.ann1.31RF02 Arachis hypogaea HOM05D002799 ORTHO05D008889 8.7e-47 191.0 172 54.1
Solyc10g006600.4 Solanum lycopersicum HOM05D002799 ORTHO05D008889 1.1e-46 190.7 144 63.9
A09p11140 Brassica napus HOM05D002799 ORTHO05D008889 1.9e-46 189.9 180 52.8
BraA09t36756Z Brassica rapa HOM05D002799 ORTHO05D008889 1.9e-46 189.9 176 53.4
BcaC04g23004 Brassica carinata HOM05D002799 ORTHO05D008889 3.3e-46 189.1 180 52.2
C09p13130 Brassica napus HOM05D002799 ORTHO05D008889 3.3e-46 189.1 180 52.2
Glyma.18G134600 Glycine max HOM05D002799 ORTHO05D008889 3.3e-46 189.1 171 53.8
AL3G49530 Arabidopsis lyrata HOM05D002799 ORTHO05D008889 7.4e-46 188.0 183 50.3
CARHR107040 Cardamine hirsuta HOM05D002799 ORTHO05D008889 7.4e-46 188.0 176 53.4
Sp3g29930 Schrenkiella parvula HOM05D002799 ORTHO05D008889 7.4e-46 188.0 184 51.1
VMungo0251G2787 Vigna mungo HOM05D002799 ORTHO05D008889 7.4e-46 188.0 175 53.1
Duzib133G0126 Durio zibethinus HOM05D002799 ORTHO05D008889 9.6e-46 187.6 157 59.2
BcaB07g31750 Brassica carinata HOM05D002799 ORTHO05D008889 1.3e-45 187.2 180 51.7
AT2G16790 Arabidopsis thaliana HOM05D002799 ORTHO05D008889 1.6e-45 186.8 178 51.7
Glyma.08G289900 Glycine max HOM05D002799 ORTHO05D008889 1.6e-45 186.8 171 53.8
Phvul.003G053900 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 3.7e-45 185.7 174 51.1
Os06g0114650 Oryza sativa ssp. japonica HOM05D002799 ORTHO05D008889 4.8e-45 185.3 178 50.6
Nn3g19277 Nelumbo nucifera HOM05D002799 ORTHO05D008889 6.3e-45 184.9 154 57.1
BolC9t54208H Brassica oleracea HOM05D002799 ORTHO05D008889 1.8e-44 183.3 169 53.3
Phvul.003G054200 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 1.8e-44 183.3 171 53.8
Carub.0003s3061 Capsella rubella HOM05D002799 ORTHO05D008889 3.1e-44 182.6 178 50.6
Aa31LG8G14030 Aethionema arabicum HOM05D002799 ORTHO05D008889 6.9e-44 181.4 175 50.9
Thhalv10022876m.g Eutrema salsugineum HOM05D002799 ORTHO05D008889 5.9e-43 178.3 170 53.5
Lj4g0019925 Lotus japonicus HOM05D002799 ORTHO05D008889 1.7e-42 176.8 156 55.8
ATR0829G224 Amborella trichopoda HOM05D002799 ORTHO05D008889 6.1e-40 168.3 196 45.4
PGR004G1571 Punica granatum HOM05D002799 ORTHO05D008889 3.0e-39 166.0 130 62.3
ClCG01G005050 Citrullus lanatus HOM05D002799 ORTHO05D008889 1.1e-38 164.1 134 59.0
COL.COLO4_19775 Corchorus olitorius HOM05D002799 ORTHO05D008889 1.3e-37 160.6 131 58.8
PSO675G5486 Papaver somniferum HOM05D002799 ORTHO05D008889 2.8e-37 159.5 200 46.0
PSO717G0064 Papaver somniferum HOM05D002799 ORTHO05D008889 2.8e-37 159.5 200 46.0
Mapoly0046s0106 Marchantia polymorpha HOM05D002799 ORTHO05D008889 2.4e-36 156.4 173 46.8
Sc19g0000240 Simmondsia chinensis HOM05D002799 ORTHO05D008889 5.3e-36 155.2 131 57.3
Aqoxy7G00884 Aquilegia oxysepala HOM05D002799 ORTHO05D008889 4.5e-35 152.1 138 55.8
AagrBONN_evm.TU.Sc2ySwM_362.1504 Anthoceros agrestis HOM05D002799 ORTHO05D008889 7.7e-35 151.4 184 42.9
Pp3c5_2750 Physcomitrium patens HOM05D002799 ORTHO05D008889 7.7e-35 151.4 195 43.1
TPR.G26908 Trifolium pratense HOM05D002799 ORTHO05D008889 2.2e-34 149.8 122 59.0
Psat4g127040 Pisum sativum HOM05D002799 ORTHO05D008889 5.5e-33 145.2 127 55.1
MD01G1233600 Malus domestica HOM05D002799 ORTHO05D008889 1.6e-32 143.7 98 67.3
SMO174G0264 Selaginella moellendorffii HOM05D002799 ORTHO05D008889 1.0e-31 141.0 180 43.9
Ca_14681_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 1.5e-30 137.1 127 53.5
Rhsim03G0164800 Rhododendron simsii HOM05D002799 ORTHO05D008889 2.0e-27 126.7 103 59.2
Cre08.g385750 Chlamydomonas reinhardtii HOM05D002799 ORTHO05D008889 1.4e-25 120.6 183 39.9
HPP92_002455 Vanilla planifolia HOM05D002799 ORTHO05D008889 3.0e-23 112.8 175 37.7
SHI03438 Sapria himalayana HOM05D002799 ORTHO05D008889 1.5e-22 110.5 141 41.1
PRCOL_00003203 Prasinoderma coloniale HOM05D002799 ORTHO05D008889 1.8e-20 103.6 193 36.3
PSO675G4133 Papaver somniferum HOM05D002799 ORTHO05D008889 2.2e-18 96.7 152 38.2
MCO08G110 Micromonas commoda HOM05D002799 ORTHO05D008889 2.1e-16 90.1 153 38.6
BcaB03g16409 Brassica carinata HOM05D002799 ORTHO05D008889 1.0e-15 87.8 102 47.1
Ca_28676_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 4.0e-15 85.9 138 34.8
Cfa026682 Carpinus fangiana HOM05D002799 ORTHO05D008889 5.7e-14 82.0 149 33.6
C07p06790 Brassica napus HOM05D002799 ORTHO05D008889 4.1e-12 75.9 132 34.8
HanXRQChr10g0305151 Helianthus annuus HOM05D002799 ORTHO05D008889 1.6e-11 73.9 48 66.7


User provided reference genes

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