Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_746.g26644 Utricularia gibba HOM05D006150 ORTHO05D007745 4.9e-179 630.9 305 100.0
MSTRG.6640 Avicennia marina HOM05D006150 ORTHO05D007745 2.8e-134 482.3 289 77.2
SalBow7G3619 Salvia bowleyana HOM05D006150 ORTHO05D007745 1.8e-133 479.6 277 79.8
CAN.G572.11 Capsicum annuum HOM05D006150 ORTHO05D007745 6.1e-129 464.5 296 73.6
COL.COLO4_07285 Corchorus olitorius HOM05D006150 ORTHO05D007745 2.0e-127 459.5 296 74.3
CSS0019555 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 4.4e-127 458.4 295 73.9
PGSC0003DMG400026243 Solanum tuberosum HOM05D006150 ORTHO05D007745 1.7e-126 456.4 299 70.6
Duzib084G0008 Durio zibethinus HOM05D006150 ORTHO05D007745 6.3e-126 454.5 277 75.5
Lj8A277T42 Lonicera japonica HOM05D006150 ORTHO05D007745 6.3e-126 454.5 283 73.5
Sopen08g026350 Solanum pennellii HOM05D006150 ORTHO05D007745 1.1e-125 453.8 299 70.2
Gorai.008G230800 Gossypium raimondii HOM05D006150 ORTHO05D007745 1.8e-125 453.0 278 75.9
Solyc08g077840.3 Solanum lycopersicum HOM05D006150 ORTHO05D007745 3.1e-125 452.2 299 69.9
Thecc.03G240100 Theobroma cacao HOM05D006150 ORTHO05D007745 9.1e-125 450.7 297 72.4
TAR636G1440 Trochodendron aralioides HOM05D006150 ORTHO05D007745 9.1e-125 450.7 296 71.3
CARHR223610 Cardamine hirsuta HOM05D006150 ORTHO05D007745 1.2e-124 450.3 296 70.6
Eucgr.D02133 Eucalyptus grandis HOM05D006150 ORTHO05D007745 1.2e-124 450.3 278 75.2
Gohir.A12G212700 Gossypium hirsutum HOM05D006150 ORTHO05D007745 1.2e-124 450.3 297 72.4
Gohir.D12G215200 Gossypium hirsutum HOM05D006150 ORTHO05D007745 1.6e-124 449.9 278 75.2
MD04G1055500 Malus domestica HOM05D006150 ORTHO05D007745 2.0e-124 449.5 301 70.4
Hma1.2p1_0570F.1_g180430 Hydrangea macrophylla HOM05D006150 ORTHO05D007745 4.5e-124 448.4 281 73.3
TWI60G0542 Tripterygium wilfordii HOM05D006150 ORTHO05D007745 4.5e-124 448.4 302 70.5
Carub.0007s2437 Capsella rubella HOM05D006150 ORTHO05D007745 1.7e-123 446.4 297 70.4
AT4G17050 Arabidopsis thaliana HOM05D006150 ORTHO05D007745 2.2e-123 446.0 293 71.3
BcaNung04656 Brassica carinata HOM05D006150 ORTHO05D007745 2.2e-123 446.0 294 70.1
Atru.chr9.1206 Acer truncatum HOM05D006150 ORTHO05D007745 3.8e-123 445.3 291 71.8
AL7G37660 Arabidopsis lyrata HOM05D006150 ORTHO05D007745 6.5e-123 444.5 301 71.1
Nn6g33757 Nelumbo nucifera HOM05D006150 ORTHO05D007745 6.5e-123 444.5 275 74.5
Cfa012327 Carpinus fangiana HOM05D006150 ORTHO05D007745 1.1e-122 443.7 295 70.8
BraA03t14117Z Brassica rapa HOM05D006150 ORTHO05D007745 2.5e-122 442.6 294 70.1
Rhsim07G0136400 Rhododendron simsii HOM05D006150 ORTHO05D007745 2.5e-122 442.6 278 72.7
C07p48460 Brassica napus HOM05D006150 ORTHO05D007745 3.2e-122 442.2 292 70.5
Cc08_g11330 Coffea canephora HOM05D006150 ORTHO05D007745 3.2e-122 442.2 299 69.2
THA.LOC104807929 Tarenaya hassleriana HOM05D006150 ORTHO05D007745 3.2e-122 442.2 293 70.0
C07p48520 Brassica napus HOM05D006150 ORTHO05D007745 4.2e-122 441.8 294 69.7
BolC7t45360H Brassica oleracea HOM05D006150 ORTHO05D007745 4.2e-122 441.8 294 69.7
Potri.003G083600 Populus trichocarpa HOM05D006150 ORTHO05D007745 5.5e-122 441.4 298 69.8
CANSAT21G0710 Cannabis sativa HOM05D006150 ORTHO05D007745 9.5e-122 440.7 293 70.0
MBI04_g13858_MAGBIO Magnolia biondii HOM05D006150 ORTHO05D007745 9.5e-122 440.7 299 69.2
Ciclev10021365m.g Citrus clementina HOM05D006150 ORTHO05D007745 1.6e-121 439.9 276 73.6
EL10Ac5g12270 Beta vulgaris HOM05D006150 ORTHO05D007745 2.1e-121 439.5 289 71.3
Manes.01G089000 Manihot esculenta HOM05D006150 ORTHO05D007745 2.1e-121 439.5 297 70.4
A03p50280 Brassica napus HOM05D006150 ORTHO05D007745 4.7e-121 438.3 294 69.7
BraA01t01953Z Brassica rapa HOM05D006150 ORTHO05D007745 1.4e-120 436.8 294 69.4
Sp7g17140 Schrenkiella parvula HOM05D006150 ORTHO05D007745 1.4e-120 436.8 297 68.7
arahy.Tifrunner.gnm1.ann1.IPM3U6 Arachis hypogaea HOM05D006150 ORTHO05D007745 1.8e-120 436.4 293 69.6
ECA234G2169 Erigeron canadensis HOM05D006150 ORTHO05D007745 5.2e-120 434.9 299 68.2
BcaC06g33538 Brassica carinata HOM05D006150 ORTHO05D007745 6.8e-120 434.5 295 69.2
BcaNung00130 Brassica carinata HOM05D006150 ORTHO05D007745 8.8e-120 434.1 295 68.1
FvH4_5g20400 Fragaria vesca HOM05D006150 ORTHO05D007745 8.8e-120 434.1 302 68.2
FAN04G1813 Fragaria x ananassa HOM05D006150 ORTHO05D007745 8.8e-120 434.1 296 70.3
RcHm_v2.0_Chr7g0205681 Rosa chinensis HOM05D006150 ORTHO05D007745 8.8e-120 434.1 302 69.2
Glyma.05G066500 Glycine max HOM05D006150 ORTHO05D007745 1.5e-119 433.3 291 68.4
BolC1t02493H Brassica oleracea HOM05D006150 ORTHO05D007745 2.0e-119 433.0 294 69.0
HanXRQChr17g0534011 Helianthus annuus HOM05D006150 ORTHO05D007745 2.0e-119 433.0 289 70.6
ClCG10G005070 Citrullus lanatus HOM05D006150 ORTHO05D007745 3.4e-119 432.2 297 68.4
CsaV3_3G004750 Cucumis sativus L. HOM05D006150 ORTHO05D007745 3.4e-119 432.2 297 68.4
Glyma.17G148400 Glycine max HOM05D006150 ORTHO05D007745 3.4e-119 432.2 290 67.9
Lalb_Chr09g0329771 Lupinus albus HOM05D006150 ORTHO05D007745 3.4e-119 432.2 303 67.3
PSO675G6476 Papaver somniferum HOM05D006150 ORTHO05D007745 4.4e-119 431.8 296 68.9
CiPaw.11G072300 Carya illinoinensis HOM05D006150 ORTHO05D007745 5.7e-119 431.4 292 68.8
PGR031G0533 Punica granatum HOM05D006150 ORTHO05D007745 9.8e-119 430.6 259 74.9
Ah.12g053980 Amaranthus hybridus HOM05D006150 ORTHO05D007745 2.2e-118 429.5 294 68.7
C07p48390 Brassica napus HOM05D006150 ORTHO05D007745 2.2e-118 429.5 296 68.9
arahy.Tifrunner.gnm1.ann1.YY6LCE Arachis hypogaea HOM05D006150 ORTHO05D007745 6.3e-118 427.9 293 69.3
Os07g0495000 Oryza sativa ssp. japonica HOM05D006150 ORTHO05D007745 6.3e-118 427.9 280 71.1
Haze_08363 Corylus avellana HOM05D006150 ORTHO05D007745 1.1e-117 427.2 320 65.3
DCAR_008330 Daucus carota HOM05D006150 ORTHO05D007745 1.1e-117 427.2 290 68.3
Sed0022790 Sechium edule HOM05D006150 ORTHO05D007745 1.1e-117 427.2 300 67.0
PSO732G0290 Papaver somniferum HOM05D006150 ORTHO05D007745 1.4e-117 426.8 295 68.1
FAN08G0760 Fragaria x ananassa HOM05D006150 ORTHO05D007745 1.8e-117 426.4 296 69.9
VMungo0251G1767 Vigna mungo HOM05D006150 ORTHO05D007745 7.0e-117 424.5 294 65.6
Zm00001eb322060 Zea mays HOM05D006150 ORTHO05D007745 7.0e-117 424.5 276 71.0
Nitab4.5_0000500g0240 Nicotiana tabacum HOM05D006150 ORTHO05D007745 1.2e-116 423.7 303 67.3
Medtr4g099290 Medicago truncatula HOM05D006150 ORTHO05D007745 3.5e-116 422.2 293 67.9
TPR.G25747 Trifolium pratense HOM05D006150 ORTHO05D007745 4.5e-116 421.8 289 68.9
Lj4g0002003 Lotus japonicus HOM05D006150 ORTHO05D007745 7.7e-116 421.0 294 68.4
Ca_22017_v3 Cicer arietinum L. HOM05D006150 ORTHO05D007745 1.0e-115 420.6 294 67.3
Phvul.003G225600 Phaseolus vulgaris HOM05D006150 ORTHO05D007745 1.3e-115 420.2 292 65.1
ATR0665G013 Amborella trichopoda HOM05D006150 ORTHO05D007745 2.9e-115 419.1 295 68.1
CDE12G0966 Ceratophyllum demersum HOM05D006150 ORTHO05D007745 3.8e-115 418.7 303 64.4
PSO732G0039 Papaver somniferum HOM05D006150 ORTHO05D007745 3.8e-115 418.7 258 72.5
Aqoxy5G02622 Aquilegia oxysepala HOM05D006150 ORTHO05D007745 4.3e-114 415.2 305 63.3
Nitab4.5_0009451g0030 Nicotiana tabacum HOM05D006150 ORTHO05D007745 6.1e-113 411.4 305 65.2
A01p20260 Brassica napus HOM05D006150 ORTHO05D007745 1.4e-112 410.2 281 68.3
Peaxi162Scf00301g00519 Petunia axillaris HOM05D006150 ORTHO05D007745 1.2e-108 397.1 281 67.3
QL12p008732 Quercus lobata HOM05D006150 ORTHO05D007745 3.5e-108 395.6 402 52.5
HPP92_025744 Vanilla planifolia HOM05D006150 ORTHO05D007745 7.8e-108 394.4 300 65.0
SEGI_33649 Sequoiadendron giganteum HOM05D006150 ORTHO05D007745 4.3e-106 388.7 277 66.8
Psat4g076080 Pisum sativum HOM05D006150 ORTHO05D007745 5.6e-106 388.3 272 68.4
Thhalv10026866m.g Eutrema salsugineum HOM05D006150 ORTHO05D007745 7.3e-106 387.9 307 63.5
Dinv28876 Davidia involucrata HOM05D006150 ORTHO05D007745 1.4e-104 383.6 245 73.9
BcaC09g50439 Brassica carinata HOM05D006150 ORTHO05D007745 1.3e-102 377.1 295 62.7
C01p25410 Brassica napus HOM05D006150 ORTHO05D007745 1.3e-102 377.1 295 62.7
Aa31LG2G13130 Aethionema arabicum HOM05D006150 ORTHO05D007745 1.7e-102 376.7 321 59.8
vmacro00832 Vaccinium macrocarpon HOM05D006150 ORTHO05D007745 1.6e-100 370.2 295 61.7
Actinidia02195 Actinidia chinensis HOM05D006150 ORTHO05D007745 4.6e-100 368.6 266 66.9
Pp3c9_12580 Physcomitrium patens HOM05D006150 ORTHO05D007745 7.8e-100 367.9 293 61.1
AagrBONN_evm.TU.Sc2ySwM_228.2274 Anthoceros agrestis HOM05D006150 ORTHO05D007745 1.4e-96 357.1 251 67.3
Mapoly0072s0097 Marchantia polymorpha HOM05D006150 ORTHO05D007745 1.8e-96 356.7 264 62.5
Sc01g0007980 Simmondsia chinensis HOM05D006150 ORTHO05D007745 5.2e-96 355.1 243 67.1
Oeu012348.1 Olea europaea HOM05D006150 ORTHO05D007745 4.4e-95 352.1 210 77.6
Prupe.5G055300 Prunus persica HOM05D006150 ORTHO05D007745 4.4e-95 352.1 211 75.8
SGA_v2.0_scaffold181G39680 Striga asiatica HOM05D006150 ORTHO05D007745 1.1e-90 337.4 241 69.7
Lsat_1_v5_gn_3_15361 Lactuca sativa HOM05D006150 ORTHO05D007745 4.0e-88 328.9 247 64.0
AUR62007167 Chenopodium quinoa HOM05D006150 ORTHO05D007745 8.4e-86 321.2 201 72.6
AUR62018839 Chenopodium quinoa HOM05D006150 ORTHO05D007745 2.4e-85 319.7 201 71.6
GSVIVG01003685001 Vitis vinifera HOM05D006150 ORTHO05D007745 1.2e-84 317.4 277 57.8
MCO07G379 Micromonas commoda HOM05D006150 ORTHO05D007745 1.8e-67 260.4 282 46.1
Cre06.g290000 Chlamydomonas reinhardtii HOM05D006150 ORTHO05D007745 8.7e-67 258.1 259 49.4
Actinidia25909 Actinidia chinensis HOM05D006150 ORTHO05D007745 3.3e-66 256.1 294 50.3
Potri.001G150800 Populus trichocarpa HOM05D006150 ORTHO05D007745 3.0e-59 233.0 195 58.5
MD06G1047100 Malus domestica HOM05D006150 ORTHO05D007745 4.3e-58 229.2 264 47.0
MCO04G282 Micromonas commoda HOM05D006150 ORTHO05D007745 1.3e-54 217.6 262 46.9
Hma1.2p1_0570F.1_g180440 Hydrangea macrophylla HOM05D006150 ORTHO05D007745 2.0e-47 193.7 127 69.3
Sabra01G0120800 Salix brachista HOM05D006150 ORTHO05D007745 6.5e-46 188.7 154 58.4
MELO3C014174.2 Cucumis melo HOM05D006150 ORTHO05D007745 1.6e-44 184.1 290 41.7
FAN18G0603 Fragaria x ananassa HOM05D006150 ORTHO05D007745 2.7e-44 183.3 151 62.3
CSS0048254 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 3.4e-39 166.4 96 81.2
Sabra01G0120600 Salix brachista HOM05D006150 ORTHO05D007745 6.3e-33 145.6 161 50.9
Cpa.g.sc98.38 Carica papaya HOM05D006150 ORTHO05D007745 3.8e-30 136.3 80 73.8
PSO717G0125 Papaver somniferum HOM05D006150 ORTHO05D007745 1.4e-29 134.4 90 68.9
CBR_g38093 Chara braunii HOM05D006150 ORTHO05D007745 1.6e-28 131.0 66 83.3
BcaC01g03436 Brassica carinata HOM05D006150 ORTHO05D007745 6.3e-25 119.0 101 56.4
GSVIVG01021810001 Vitis vinifera HOM05D006150 ORTHO05D007745 2.0e-15 87.4 103 49.5
Oeu040463.1 Olea europaea HOM05D001574 ORTHO05D000708 2.3e-11 73.9 58 60.3
Cpa.g.sc98.35 Carica papaya HOM05D006150 ORTHO05D007745 4.4e-10 69.7 56 55.4
Lsat_1_v5_gn_6_74120 Lactuca sativa HOM05D006150 ORTHO05D233887 2.9e-06 57.0 33 72.7


User provided reference genes

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