Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_746.g26569 Utricularia gibba HOM05D000086 ORTHO05D001065 5.9e-50 200.7 109 100.0
MSTRG.24007 Avicennia marina HOM05D000086 ORTHO05D001065 8.9e-14 80.5 89 53.9
Migut.H00134 Erythranthe guttata HOM05D000086 ORTHO05D001065 3.7e-12 75.1 99 51.5
SalBow1G1023 Salvia bowleyana HOM05D000086 ORTHO05D001065 1.4e-11 73.2 94 52.1
Aqoxy3G00986 Aquilegia oxysepala HOM05D000086 ORTHO05D001065 1.6e-10 69.7 88 50.0
MD06G1176900 Malus domestica HOM05D000086 ORTHO05D001065 2.0e-10 69.3 88 50.0
CSS0012672 Camellia sinensis var. sinensis HOM05D000086 ORTHO05D001065 3.5e-10 68.6 89 48.3
Nn4g22815 Nelumbo nucifera HOM05D002398 ORTHO05D001065 4.6e-10 68.2 88 46.6
Hma1.2p1_0802F.1_g220490 Hydrangea macrophylla HOM05D000086 ORTHO05D001065 7.8e-10 67.4 88 52.3
Hma1.2p1_0967F.1_g242230 Hydrangea macrophylla HOM05D000086 ORTHO05D001065 7.8e-10 67.4 88 52.3
Nn3g16909 Nelumbo nucifera HOM05D000086 ORTHO05D001065 7.8e-10 67.4 88 47.7
Thecc.03G009900 Theobroma cacao HOM05D000086 ORTHO05D001065 7.8e-10 67.4 88 46.6
MSTRG.3303 Avicennia marina HOM05D000086 ORTHO05D001065 1.0e-09 67.0 90 48.9
unitig_899.g15494 Utricularia gibba HOM05D004134 ORTHO05D005240 3.0e-09 65.5 64 60.9
Sopen02g016820 Solanum pennellii HOM05D000086 ORTHO05D001065 5.0e-09 64.7 88 48.9
TWI56G0617 Tripterygium wilfordii HOM05D000086 ORTHO05D001065 5.0e-09 64.7 91 46.2
COL.COLO4_34051 Corchorus olitorius HOM05D000086 ORTHO05D001065 6.6e-09 64.3 91 45.1
QL02p076837 Quercus lobata HOM05D000086 ORTHO05D001065 6.6e-09 64.3 88 46.6
Nitab4.5_0001709g0030 Nicotiana tabacum HOM05D000086 ORTHO05D001065 8.6e-09 63.9 88 45.5
Cfa007437 Carpinus fangiana HOM05D000086 ORTHO05D001065 1.1e-08 63.5 88 43.2
Cfa019098 Carpinus fangiana HOM05D000086 ORTHO05D001065 1.1e-08 63.5 91 45.1
PGSC0003DMG400006951 Solanum tuberosum HOM05D000086 ORTHO05D001065 1.1e-08 63.5 88 47.7
Eucgr.K02856 Eucalyptus grandis HOM05D000086 ORTHO05D001065 1.5e-08 63.2 92 45.7
Duzib205G1408 Durio zibethinus HOM05D000086 ORTHO05D001065 3.3e-08 62.0 88 46.6
MBI14_g46933_MAGBIO Magnolia biondii HOM05D000086 ORTHO05D001065 3.3e-08 62.0 88 44.3
MD14G1183100 Malus domestica HOM05D000086 ORTHO05D001065 3.3e-08 62.0 88 43.2
RcHm_v2.0_Chr7g0193811 Rosa chinensis HOM05D000086 ORTHO05D001065 3.3e-08 62.0 91 46.2
Peaxi162Scf00933g00023 Petunia axillaris HOM05D000086 ORTHO05D001065 4.3e-08 61.6 88 47.7
Atru.chr9.2447 Acer truncatum HOM05D000086 ORTHO05D001065 7.3e-08 60.8 89 44.9
Nitab4.5_0001125g0010 Nicotiana tabacum HOM05D000086 ORTHO05D001065 7.3e-08 60.8 88 44.3
MSTRG.15508 Avicennia marina HOM05D000086 ORTHO05D001065 9.5e-08 60.5 91 49.5
PSO478G2048 Papaver somniferum HOM05D000086 ORTHO05D001065 9.5e-08 60.5 96 44.8
Manes.06G103500 Manihot esculenta HOM05D000086 ORTHO05D001065 1.2e-07 60.1 95 38.9
Sopen02g031720 Solanum pennellii HOM05D000086 ORTHO05D001065 1.2e-07 60.1 88 39.8
TAR622G0426 Trochodendron aralioides HOM05D000086 ORTHO05D001065 1.6e-07 59.7 88 46.6
TAR622G0760 Trochodendron aralioides HOM05D000086 ORTHO05D001065 1.6e-07 59.7 88 46.6
Duzib147G0849 Durio zibethinus HOM05D000086 ORTHO05D001065 2.1e-07 59.3 88 45.5
PGSC0003DMG400000533 Solanum tuberosum HOM05D000086 ORTHO05D001065 2.1e-07 59.3 88 42.0
PSO017G0322 Papaver somniferum HOM05D000086 ORTHO05D001065 2.8e-07 58.9 96 43.8
Ciclev10022743m.g Citrus clementina HOM05D000086 ORTHO05D001065 3.6e-07 58.5 88 40.9
Nitab4.5_0000852g0120 Nicotiana tabacum HOM05D000086 ORTHO05D001065 3.6e-07 58.5 88 42.0
Solyc02g086950.1 Solanum lycopersicum HOM05D000086 ORTHO05D001065 4.7e-07 58.2 88 39.8
TPR.G30389 Trifolium pratense HOM05D000086 ORTHO05D001065 6.2e-07 57.8 88 42.0
ATR0691G277 Amborella trichopoda HOM05D000086 ORTHO05D001065 8.0e-07 57.4 86 41.9
ClCG01G013040 Citrullus lanatus HOM05D000086 ORTHO05D001065 8.0e-07 57.4 90 37.8
Manes.17G122600 Manihot esculenta HOM05D000086 ORTHO05D001065 8.0e-07 57.4 88 42.0
COL.COLO4_04777 Corchorus olitorius HOM05D000086 ORTHO05D001065 1.1e-06 57.0 94 39.4
Duzib068G0244 Durio zibethinus HOM05D000086 ORTHO05D001065 1.4e-06 56.6 88 43.2
Prupe.5G175600 Prunus persica HOM05D000086 ORTHO05D001065 1.4e-06 56.6 88 42.0
Solyc02g067700.1 Solanum lycopersicum HOM05D000086 ORTHO05D001065 1.4e-06 56.6 88 45.5
Ca_16194_v3 Cicer arietinum L. HOM05D000086 ORTHO05D001065 1.8e-06 56.2 90 41.1
Oeu022166.1 Olea europaea HOM05D000086 ORTHO05D001065 1.8e-06 56.2 90 38.9
Peaxi162Scf00129g01020 Petunia axillaris HOM05D000086 ORTHO05D001065 1.8e-06 56.2 88 40.9
CiPaw.03G036900 Carya illinoinensis HOM05D000086 ORTHO05D001065 2.3e-06 55.8 91 45.1
TAR374G1721 Trochodendron aralioides HOM05D000086 ORTHO05D001065 2.3e-06 55.8 84 38.1
EL10Ac5g10775 Beta vulgaris HOM05D000086 ORTHO05D001065 3.1e-06 55.5 92 41.3
Medtr3g078120 Medicago truncatula HOM05D000086 ORTHO05D001065 4.0e-06 55.1 91 39.6
Actinidia06031 Actinidia chinensis HOM05D000086 ORTHO05D001065 5.2e-06 54.7 77 42.9
Glyma.04G181300 Glycine max HOM05D000086 ORTHO05D001065 5.2e-06 54.7 94 37.2
Lalb_Chr21g0319391 Lupinus albus HOM05D000086 ORTHO05D001065 6.8e-06 54.3 81 39.5
CANSAT54G1929 Cannabis sativa HOM05D000086 ORTHO05D001065 8.9e-06 53.9 96 36.5
FAN04G2400 Fragaria x ananassa HOM05D000086 ORTHO05D001065 8.9e-06 53.9 90 42.2
Nitab4.5_0001952g0020 Nicotiana tabacum HOM05D000106 ORTHO05D001065 8.9e-06 53.9 88 38.6
Peaxi162Scf00017g00282 Petunia axillaris HOM05D000086 ORTHO05D001065 8.9e-06 53.9 89 41.6


User provided reference genes

Program Settings