Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_744.g24565 Utricularia gibba HOM05D006006 ORTHO05D007566 4.7e-202 707.6 346 100.0
unitig_21.g20180 Utricularia gibba HOM05D006006 ORTHO05D007566 3.3e-171 605.1 344 83.7
Oeu051259.1 Olea europaea HOM05D006006 ORTHO05D007566 6.9e-145 517.7 344 72.7
Oeu014478.2 Olea europaea HOM05D006006 ORTHO05D007566 7.9e-141 504.2 363 68.3
MSTRG.24200 Avicennia marina HOM05D006006 ORTHO05D007566 1.0e-140 503.8 343 70.6
Sopen06g020580 Solanum pennellii HOM05D006006 ORTHO05D007566 1.4e-137 493.4 347 68.9
Solyc06g060460.3 Solanum lycopersicum HOM05D006006 ORTHO05D007566 4.1e-137 491.9 347 68.9
PGSC0003DMG400017575 Solanum tuberosum HOM05D006006 ORTHO05D007566 3.4e-136 488.8 347 69.2
CAN.G62.45 Capsicum annuum HOM05D006006 ORTHO05D007566 1.9e-134 483.0 351 68.4
TAR381G0495 Trochodendron aralioides HOM05D006006 ORTHO05D007566 4.2e-134 481.9 343 67.9
THA.LOC104813696 Tarenaya hassleriana HOM05D006006 ORTHO05D007566 7.2e-134 481.1 341 67.7
Nitab4.5_0000633g0110 Nicotiana tabacum HOM05D006006 ORTHO05D007566 3.6e-133 478.8 348 67.5
Migut.N03230 Erythranthe guttata HOM05D006006 ORTHO05D007566 1.0e-132 477.2 350 69.1
ClCG09G009860 Citrullus lanatus HOM05D006006 ORTHO05D007566 5.1e-132 474.9 344 66.3
Manes.02G175900 Manihot esculenta HOM05D006006 ORTHO05D007566 5.1e-132 474.9 340 67.6
Lj7A365T41 Lonicera japonica HOM05D006006 ORTHO05D007566 2.5e-131 472.6 337 67.1
GSVIVG01010048001 Vitis vinifera HOM05D006006 ORTHO05D007566 3.3e-131 472.2 347 66.0
CsaV3_7G024870 Cucumis sativus L. HOM05D006006 ORTHO05D007566 7.4e-131 471.1 344 66.0
Atru.chr13.1712 Acer truncatum HOM05D006006 ORTHO05D007566 9.7e-131 470.7 348 64.9
Cpa.g.sc49.54 Carica papaya HOM05D006006 ORTHO05D007566 1.3e-130 470.3 338 67.2
DCAR_008158 Daucus carota HOM05D006006 ORTHO05D007566 1.7e-130 469.9 337 65.9
Nn1g06190 Nelumbo nucifera HOM05D006006 ORTHO05D007566 1.7e-130 469.9 336 67.3
Thecc.08G145800 Theobroma cacao HOM05D006006 ORTHO05D007566 2.8e-130 469.2 348 66.1
Aqoxy6G00385 Aquilegia oxysepala HOM05D006006 ORTHO05D007566 4.8e-130 468.4 338 66.3
CSS0049727 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 1.1e-129 467.2 344 66.6
Eucgr.F04261 Eucalyptus grandis HOM05D006006 ORTHO05D007566 3.1e-129 465.7 346 65.0
CSS0044653 Camellia sinensis var. sinensis HOM05D006006 ORTHO05D007566 4.1e-129 465.3 344 66.6
Sabra02G0056100 Salix brachista HOM05D006006 ORTHO05D007566 4.1e-129 465.3 338 66.3
Thhalv10008107m.g Eutrema salsugineum HOM05D006006 ORTHO05D007566 9.1e-129 464.2 343 66.2
Cfa018352 Carpinus fangiana HOM05D006006 ORTHO05D007566 2.0e-128 463.0 347 65.1
Duzib093G0547 Durio zibethinus HOM05D006006 ORTHO05D007566 5.9e-128 461.5 346 65.0
Prupe.8G021400 Prunus persica HOM05D006006 ORTHO05D007566 5.9e-128 461.5 334 64.7
Gorai.005G081300 Gossypium raimondii HOM05D006006 ORTHO05D007566 1.0e-127 460.7 346 65.0
CiPaw.15G020800 Carya illinoinensis HOM05D006006 ORTHO05D007566 2.2e-127 459.5 348 63.2
Sed0017044 Sechium edule HOM05D006006 ORTHO05D007566 6.5e-127 458.0 349 64.5
AT1G21370 Arabidopsis thaliana HOM05D006006 ORTHO05D007566 1.1e-126 457.2 343 67.3
QL02p024995 Quercus lobata HOM05D006006 ORTHO05D007566 1.1e-126 457.2 350 65.1
RcHm_v2.0_Chr6g0276791 Rosa chinensis HOM05D006006 ORTHO05D007566 1.1e-126 457.2 344 63.7
COL.COLO4_04848 Corchorus olitorius HOM05D006006 ORTHO05D007566 1.4e-126 456.8 347 64.6
Potri.002G071300 Populus trichocarpa HOM05D006006 ORTHO05D007566 1.4e-126 456.8 338 64.5
Carub.0001s2078 Capsella rubella HOM05D006006 ORTHO05D007566 1.9e-126 456.4 344 66.6
Cc10_g14250 Coffea canephora HOM05D006006 ORTHO05D007566 1.9e-126 456.4 325 68.0
Gohir.D03G061500 Gossypium hirsutum HOM05D006006 ORTHO05D007566 4.2e-126 455.3 343 64.1
Gorai.013G105300 Gossypium raimondii HOM05D006006 ORTHO05D007566 4.2e-126 455.3 343 63.8
Gohir.D02G072100 Gossypium hirsutum HOM05D006006 ORTHO05D007566 5.5e-126 454.9 346 64.2
Gohir.A02G066200 Gossypium hirsutum HOM05D006006 ORTHO05D007566 2.1e-125 453.0 346 64.2
CANSAT25G3881 Cannabis sativa HOM05D006006 ORTHO05D007566 2.7e-125 452.6 345 62.6
Lalb_Chr04g0263651 Lupinus albus HOM05D006006 ORTHO05D007566 2.7e-125 452.6 343 63.0
MBI03_g11319_MAGBIO Magnolia biondii HOM05D006006 ORTHO05D007566 3.6e-125 452.2 346 63.6
MELO3C023695.2 Cucumis melo HOM05D006006 ORTHO05D007566 7.9e-125 451.1 403 56.8
PSO675G8728 Papaver somniferum HOM05D006006 ORTHO05D007566 7.9e-125 451.1 348 63.2
BraA06t24839Z Brassica rapa HOM05D006006 ORTHO05D007566 1.8e-124 449.9 346 65.3
FAN27G0920 Fragaria x ananassa HOM05D006006 ORTHO05D007566 1.8e-124 449.9 344 64.0
Sp1g18920 Schrenkiella parvula HOM05D006006 ORTHO05D007566 1.8e-124 449.9 344 64.8
HanXRQChr04g0109001 Helianthus annuus HOM05D006006 ORTHO05D007566 2.3e-124 449.5 341 64.8
CiPaw.16G016900 Carya illinoinensis HOM05D006006 ORTHO05D007566 5.1e-124 448.4 346 62.7
Phvul.001G072900 Phaseolus vulgaris HOM05D006006 ORTHO05D007566 5.1e-124 448.4 337 65.0
PGR042G3502 Punica granatum HOM05D006006 ORTHO05D007566 5.1e-124 448.4 339 65.5
Ciclev10001700m.g Citrus clementina HOM05D006006 ORTHO05D007566 6.7e-124 448.0 348 61.8
FvH4_2g14460 Fragaria vesca HOM05D006006 ORTHO05D007566 6.7e-124 448.0 344 63.7
PSO541G2188 Papaver somniferum HOM05D006006 ORTHO05D007566 6.7e-124 448.0 348 63.2
Haze_17707 Corylus avellana HOM05D006006 ORTHO05D007566 8.8e-124 447.6 377 60.5
MD05G1017500 Malus domestica HOM05D006006 ORTHO05D007566 1.1e-123 447.2 334 63.5
CARHR021760 Cardamine hirsuta HOM05D006006 ORTHO05D007566 1.5e-123 446.8 340 66.5
FAN15G3392 Fragaria x ananassa HOM05D006006 ORTHO05D007566 2.0e-123 446.4 344 63.1
MD10G1017500 Malus domestica HOM05D006006 ORTHO05D007566 2.0e-123 446.4 335 63.9
FAN24G1565 Fragaria x ananassa HOM05D006006 ORTHO05D007566 2.6e-123 446.0 344 63.7
Nn5g28652 Nelumbo nucifera HOM05D006006 ORTHO05D007566 2.6e-123 446.0 338 65.1
Aa31LG7G5530 Aethionema arabicum HOM05D006006 ORTHO05D007566 3.3e-123 445.7 344 64.8
BcaB07g32125 Brassica carinata HOM05D006006 ORTHO05D007566 3.3e-123 445.7 336 65.2
A06p17420 Brassica napus HOM05D006006 ORTHO05D007566 4.4e-123 445.3 344 64.5
C05p20260 Brassica napus HOM05D006006 ORTHO05D007566 5.7e-123 444.9 347 64.6
BolC5t30719H Brassica oleracea HOM05D006006 ORTHO05D007566 5.7e-123 444.9 347 64.6
BcaC05g26044 Brassica carinata HOM05D006006 ORTHO05D007566 7.4e-123 444.5 347 64.6
HPP92_004629 Vanilla planifolia HOM05D006006 ORTHO05D007566 2.8e-122 442.6 332 63.9
Glyma.13G039000 Glycine max HOM05D006006 ORTHO05D007566 1.1e-121 440.7 349 61.3
TWI34G1885 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 1.1e-121 440.7 340 64.4
Glyma.14G123000 Glycine max HOM05D006006 ORTHO05D007566 6.9e-121 438.0 349 60.7
arahy.Tifrunner.gnm1.ann1.D9Y8GI Arachis hypogaea HOM05D006006 ORTHO05D007566 9.1e-121 437.6 350 62.3
Lj4A692T31 Lonicera japonica HOM05D006006 ORTHO05D007566 9.1e-121 437.6 338 62.4
Lj1g0023019 Lotus japonicus HOM05D006006 ORTHO05D007566 1.2e-120 437.2 342 62.6
FAN20G0686 Fragaria x ananassa HOM05D006006 ORTHO05D007566 3.4e-120 435.6 376 58.5
arahy.Tifrunner.gnm1.ann1.T5RWDG Arachis hypogaea HOM05D006006 ORTHO05D007566 1.0e-119 434.1 350 61.7
BcaB03g12819 Brassica carinata HOM05D006006 ORTHO05D007566 1.3e-119 433.7 340 62.4
Zm00001eb422860 Zea mays HOM05D006006 ORTHO05D007566 1.3e-119 433.7 337 62.3
TWI60G1394 Tripterygium wilfordii HOM05D006006 ORTHO05D007566 1.7e-119 433.3 340 62.9
Os04g0438500 Oryza sativa ssp. japonica HOM05D006006 ORTHO05D007566 1.1e-118 430.6 345 60.6
HanXRQChr08g0217661 Helianthus annuus HOM05D006006 ORTHO05D007566 4.2e-118 428.7 349 61.0
AL1G34470 Arabidopsis lyrata HOM05D006006 ORTHO05D007566 7.2e-118 427.9 301 68.8
Ah.01g005030 Amaranthus hybridus HOM05D006006 ORTHO05D007566 1.2e-117 427.2 335 61.8
Ca_12665_v3 Cicer arietinum L. HOM05D006006 ORTHO05D007566 1.6e-117 426.8 342 60.5
TPR.G33300 Trifolium pratense HOM05D006006 ORTHO05D007566 2.3e-116 422.9 337 60.8
EL10Ac9g20647 Beta vulgaris HOM05D006006 ORTHO05D007566 3.0e-116 422.5 340 59.1
Lsat_1_v5_gn_1_8980 Lactuca sativa HOM05D006006 ORTHO05D007566 7.4e-115 417.9 290 65.5
Actinidia15154 Actinidia chinensis HOM05D006006 ORTHO05D007566 9.7e-115 417.5 285 68.4
C08p20770 Brassica napus HOM05D006006 ORTHO05D007566 1.3e-114 417.2 321 62.9
VMungo0647G2124 Vigna mungo HOM05D006006 ORTHO05D007566 2.2e-114 416.4 326 63.2
ATR1136G139 Amborella trichopoda HOM05D006006 ORTHO05D007566 2.8e-114 416.0 343 58.0
Medtr1g029000 Medicago truncatula HOM05D006006 ORTHO05D007566 3.7e-114 415.6 342 59.4
Psat0s5561g0040 Pisum sativum HOM05D006006 ORTHO05D007566 7.0e-113 411.4 347 58.5
Peaxi162Scf00051g00516 Petunia axillaris HOM05D006006 ORTHO05D007566 3.8e-111 405.6 233 79.4
ECA247G2705 Erigeron canadensis HOM05D006006 ORTHO05D007566 1.5e-110 403.7 251 72.5
SHI09110 Sapria himalayana HOM05D006006 ORTHO05D007566 1.3e-106 390.6 337 57.6
CDE06G2625 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 1.7e-106 390.2 245 70.6
CDE08G1689 Ceratophyllum demersum HOM05D006006 ORTHO05D007566 1.1e-105 387.5 245 69.8
SEGI_37970 Sequoiadendron giganteum HOM05D006006 ORTHO05D007566 7.7e-104 381.3 329 58.4
BolC8t49716H Brassica oleracea HOM05D006006 ORTHO05D007566 5.0e-103 378.6 322 58.4
Mapoly0050s0105 Marchantia polymorpha HOM05D006006 ORTHO05D007566 6.1e-101 371.7 301 58.5
Pp3c25_12020 Physcomitrium patens HOM05D006006 ORTHO05D007566 8.9e-92 341.3 328 52.7
Dinv25817 Davidia involucrata HOM05D006006 ORTHO05D007566 1.8e-89 333.6 247 67.2
BcaC07g39093 Brassica carinata HOM05D006006 ORTHO05D007566 5.4e-89 332.0 322 55.3
C06p40100 Brassica napus HOM05D006006 ORTHO05D007566 2.3e-84 316.6 232 64.7
SMO228G0011 Selaginella moellendorffii HOM05D006006 ORTHO05D007566 7.5e-83 311.6 243 60.5
Pp3c6_4630 Physcomitrium patens HOM05D006006 ORTHO05D007566 1.7e-82 310.5 329 49.8
SGA_v2.0_scaffold25G11170 Striga asiatica HOM05D006006 ORTHO05D007566 2.9e-82 309.7 242 66.5
Nitab4.5_0008475g0010 Nicotiana tabacum HOM05D006006 ORTHO05D007566 1.9e-81 307.0 244 65.2
Sc02g0004370 Simmondsia chinensis HOM05D006006 ORTHO05D007566 9.5e-78 294.7 236 63.1
Gohir.A02G108509 Gossypium hirsutum HOM05D006006 ORTHO05D007566 4.0e-76 289.3 240 60.8
Gohir.A02G108508 Gossypium hirsutum HOM05D006006 ORTHO05D007566 5.2e-76 288.9 240 60.8
AagrBONN_evm.TU.Sc2ySwM_344.2333 Anthoceros agrestis HOM05D006006 ORTHO05D007566 1.1e-68 264.6 173 70.5
MCO04G174 Micromonas commoda HOM05D006006 ORTHO05D007566 7.1e-65 251.9 245 51.0
TAR625G0955 Trochodendron aralioides HOM05D006006 ORTHO05D007566 7.3e-54 215.3 165 61.2
PRCOL_00006391 Prasinoderma coloniale HOM05D006006 ORTHO05D007566 6.9e-52 208.8 190 53.7
AUR62025132 Chenopodium quinoa HOM05D006006 ORTHO05D007566 4.4e-51 206.1 194 53.6
Cre02.g116000 Chlamydomonas reinhardtii HOM05D006006 ORTHO05D007566 4.9e-50 202.6 180 57.2
AUR62037127 Chenopodium quinoa HOM05D006006 ORTHO05D007566 1.9e-49 200.7 193 52.3
Pp3c5_24650 Physcomitrium patens HOM05D006006 ORTHO05D007566 7.3e-46 188.7 163 58.3
SGA_v2.0_scaffold35G14089 Striga asiatica HOM05D006006 ORTHO05D007566 6.2e-29 132.5 79 78.5
Ah.02g110550 Amaranthus hybridus HOM05D006006 ORTHO05D007566 2.3e-23 114.0 73 72.6
CDE04G1521 Ceratophyllum demersum HOM05D000566 ORTHO05D000686 1.8e-15 87.8 57 63.2
Pp3c16_22840 Physcomitrium patens HOM05D006006 ORTHO05D318415 5.5e-09 66.2 92 39.1


User provided reference genes

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