Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_744.g24344 Utricularia gibba HOM05D006434 ORTHO05D008069 6.3e-196 687.2 332 100.0
Nitab4.5_0001727g0150 Nicotiana tabacum HOM05D006434 ORTHO05D008069 2.1e-106 389.8 330 62.4
Migut.H00876 Erythranthe guttata HOM05D006434 ORTHO05D008069 8.7e-105 384.4 268 72.0
Hma1.2p1_0136F.1_g062090 Hydrangea macrophylla HOM05D006434 ORTHO05D008069 8.7e-105 384.4 261 73.9
CAN.G1128.11 Capsicum annuum HOM05D006434 ORTHO05D008069 9.7e-104 380.9 257 73.9
Oeu022866.3 Olea europaea HOM05D006434 ORTHO05D008069 1.3e-103 380.6 363 58.1
GSVIVG01032566001 Vitis vinifera HOM05D006434 ORTHO05D008069 1.3e-103 380.6 272 71.3
Dinv35002 Davidia involucrata HOM05D006434 ORTHO05D008069 3.7e-103 379.0 258 74.4
SGA_v2.0_scaffold205G41750 Striga asiatica HOM05D006434 ORTHO05D008069 6.3e-103 378.3 264 72.0
PGSC0003DMG400006900 Solanum tuberosum HOM05D006434 ORTHO05D008069 4.1e-102 375.6 257 72.4
TAR629G3263 Trochodendron aralioides HOM05D006434 ORTHO05D008069 4.1e-102 375.6 259 73.4
MSTRG.23964 Avicennia marina HOM05D006434 ORTHO05D008069 1.2e-101 374.0 331 61.9
vmacro05779 Vaccinium macrocarpon HOM05D006434 ORTHO05D008069 1.2e-101 374.0 270 71.1
Cc07_g02850 Coffea canephora HOM05D006434 ORTHO05D008069 2.0e-101 373.2 326 60.7
Peaxi162Scf00059g00128 Petunia axillaris HOM05D006434 ORTHO05D008069 4.5e-101 372.1 298 65.1
Solyc02g067540.3 Solanum lycopersicum HOM05D006434 ORTHO05D008069 4.5e-101 372.1 268 69.4
Sopen02g016670 Solanum pennellii HOM05D006434 ORTHO05D008069 4.5e-101 372.1 268 69.4
CSS0040499 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.7e-100 370.2 271 70.1
CSS0004781 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 3.8e-100 369.0 260 72.3
Actinidia06053 Actinidia chinensis HOM05D006434 ORTHO05D008069 6.5e-100 368.2 267 69.3
Rhsim10G0029400 Rhododendron simsii HOM05D006434 ORTHO05D008069 1.4e-99 367.1 271 69.7
Sc10g0004040 Simmondsia chinensis HOM05D006434 ORTHO05D008069 1.9e-99 366.7 253 71.5
Cfa007492 Carpinus fangiana HOM05D006434 ORTHO05D008069 4.2e-99 365.5 262 70.2
MELO3C021484.2 Cucumis melo HOM05D006434 ORTHO05D008069 9.4e-99 364.4 252 71.8
COL.COLO4_36989 Corchorus olitorius HOM05D006434 ORTHO05D008069 1.2e-98 364.0 256 70.3
Phvul.004G023900 Phaseolus vulgaris HOM05D006434 ORTHO05D008069 6.1e-98 361.7 340 59.1
CANSAT64G2331 Cannabis sativa HOM05D006434 ORTHO05D008069 7.9e-98 361.3 261 68.6
Nn1g08819 Nelumbo nucifera HOM05D006434 ORTHO05D008069 1.4e-97 360.5 258 70.5
QL02p079411 Quercus lobata HOM05D006434 ORTHO05D008069 1.4e-97 360.5 260 70.0
CsaV3_5G037720 Cucumis sativus L. HOM05D006434 ORTHO05D008069 1.8e-97 360.1 256 70.3
PGR142G2438 Punica granatum HOM05D006434 ORTHO05D008069 5.1e-97 358.6 302 61.9
TWI56G0494 Tripterygium wilfordii HOM05D006434 ORTHO05D008069 6.7e-97 358.2 251 70.9
Glyma.13G066900 Glycine max HOM05D006434 ORTHO05D008069 1.1e-96 357.5 272 68.4
Duzib264G0249 Durio zibethinus HOM05D006434 ORTHO05D008069 2.0e-96 356.7 275 67.3
AUR62018326 Chenopodium quinoa HOM05D006434 ORTHO05D008069 3.3e-96 355.9 267 66.7
Eucgr.I01896 Eucalyptus grandis HOM05D006434 ORTHO05D008069 3.3e-96 355.9 269 66.2
RcHm_v2.0_Chr2g0169691 Rosa chinensis HOM05D006434 ORTHO05D008069 3.3e-96 355.9 256 71.9
Sed0011674 Sechium edule HOM05D006434 ORTHO05D008069 4.4e-96 355.5 262 68.3
PSO161G0076 Papaver somniferum HOM05D006434 ORTHO05D008069 5.7e-96 355.1 252 70.2
FvH4_6g49670 Fragaria vesca HOM05D006434 ORTHO05D008069 7.4e-96 354.8 256 72.3
FAN02G4063 Fragaria x ananassa HOM05D006434 ORTHO05D008069 7.4e-96 354.8 256 72.3
FAN14G5872 Fragaria x ananassa HOM05D006434 ORTHO05D008069 7.4e-96 354.8 256 72.3
Aqoxy3G00846 Aquilegia oxysepala HOM05D006434 ORTHO05D008069 9.7e-96 354.4 273 66.3
Manes.15G178000 Manihot esculenta HOM05D006434 ORTHO05D008069 1.7e-95 353.6 251 70.1
Medtr6g009400 Medicago truncatula HOM05D006434 ORTHO05D008069 2.2e-95 353.2 274 66.8
Potri.001G349800 Populus trichocarpa HOM05D006434 ORTHO05D008069 2.8e-95 352.8 262 67.2
Sabra16G0229200 Salix brachista HOM05D006434 ORTHO05D008069 2.8e-95 352.8 262 67.9
Ciclev10012231m.g Citrus clementina HOM05D006434 ORTHO05D008069 4.8e-95 352.1 272 66.9
ECA232G4812 Erigeron canadensis HOM05D006434 ORTHO05D008069 4.8e-95 352.1 272 66.5
Atru.chr8.2465 Acer truncatum HOM05D006434 ORTHO05D008069 8.2e-95 351.3 271 65.7
Aa31LG2G4610 Aethionema arabicum HOM05D006434 ORTHO05D008069 8.2e-95 351.3 258 70.2
FAN05G1688 Fragaria x ananassa HOM05D006434 ORTHO05D008069 8.2e-95 351.3 256 71.5
PSO478G2838 Papaver somniferum HOM05D006434 ORTHO05D008069 8.2e-95 351.3 270 66.7
Carub.0005s0699 Capsella rubella HOM05D006434 ORTHO05D008069 1.4e-94 350.5 291 63.9
CARHR292500 Cardamine hirsuta HOM05D006434 ORTHO05D008069 3.1e-94 349.4 294 62.9
ATR0665G567 Amborella trichopoda HOM05D006434 ORTHO05D008069 5.3e-94 348.6 282 62.8
AL5G18090 Arabidopsis lyrata HOM05D006434 ORTHO05D008069 6.9e-94 348.2 291 63.6
MD09G1042700 Malus domestica HOM05D006434 ORTHO05D008069 6.9e-94 348.2 256 71.1
Thhalv10004634m.g Eutrema salsugineum HOM05D006434 ORTHO05D008069 9.1e-94 347.8 290 63.8
Gorai.001G257900 Gossypium raimondii HOM05D006434 ORTHO05D008069 1.2e-93 347.4 275 66.5
Thecc.04G069300 Theobroma cacao HOM05D006434 ORTHO05D008069 2.0e-93 346.7 274 66.1
Gohir.A07G216800 Gossypium hirsutum HOM05D006434 ORTHO05D008069 3.4e-93 345.9 275 65.8
TPR.G32608 Trifolium pratense HOM05D006434 ORTHO05D008069 4.5e-93 345.5 275 65.1
Gohir.D07G223600 Gossypium hirsutum HOM05D006434 ORTHO05D008069 5.9e-93 345.1 275 66.2
VMungo0464G0451 Vigna mungo HOM05D006434 ORTHO05D008069 5.9e-93 345.1 341 56.6
arahy.Tifrunner.gnm1.ann1.X2C98S Arachis hypogaea HOM05D006434 ORTHO05D008069 7.7e-93 344.7 265 68.7
THA.LOC104823923 Tarenaya hassleriana HOM05D006434 ORTHO05D008069 7.7e-93 344.7 248 70.2
arahy.Tifrunner.gnm1.ann1.ICRE53 Arachis hypogaea HOM05D006434 ORTHO05D008069 1.0e-92 344.4 262 69.8
BcaC06g33735 Brassica carinata HOM05D006434 ORTHO05D008069 2.2e-92 343.2 258 66.7
HanXRQChr15g0488521 Helianthus annuus HOM05D006434 ORTHO05D008069 2.2e-92 343.2 256 68.8
Sp2g17230 Schrenkiella parvula HOM05D006434 ORTHO05D008069 2.2e-92 343.2 255 67.8
Lj2g0012157 Lotus japonicus HOM05D006434 ORTHO05D008069 2.9e-92 342.8 269 68.0
DCAR_006717 Daucus carota HOM05D006434 ORTHO05D008069 3.2e-91 339.3 227 72.7
AUR62030560 Chenopodium quinoa HOM05D006434 ORTHO05D008069 9.4e-91 337.8 277 62.8
C07p37520 Brassica napus HOM05D006434 ORTHO05D008069 6.1e-90 335.1 259 66.0
BolC7t44265H Brassica oleracea HOM05D006434 ORTHO05D008069 6.1e-90 335.1 259 66.0
Lalb_Chr21g0319131 Lupinus albus HOM05D006434 ORTHO05D008069 1.0e-89 334.3 269 65.4
A06p40510 Brassica napus HOM05D006434 ORTHO05D008069 1.4e-89 334.0 258 66.3
BraA06t26970Z Brassica rapa HOM05D006434 ORTHO05D008069 1.4e-89 334.0 258 66.3
Lsat_1_v5_gn_4_180280 Lactuca sativa HOM05D006434 ORTHO05D008069 2.0e-88 330.1 278 62.9
CDE02G1577 Ceratophyllum demersum HOM05D006434 ORTHO05D008069 5.7e-88 328.6 273 61.2
CiPaw.03G032300 Carya illinoinensis HOM05D006434 ORTHO05D008069 1.3e-87 327.4 235 68.9
Psat1g076480 Pisum sativum HOM05D006434 ORTHO05D008069 2.8e-87 326.2 262 65.6
HPP92_023566 Vanilla planifolia HOM05D006434 ORTHO05D008069 6.3e-87 325.1 248 65.3
EL10Ac2g02902 Beta vulgaris HOM05D006434 ORTHO05D008069 2.0e-85 320.1 288 60.4
Os03g0736400 Oryza sativa ssp. japonica HOM05D006434 ORTHO05D008069 2.0e-85 320.1 259 62.5
ClCG09G018520 Citrullus lanatus HOM05D006434 ORTHO05D008069 5.0e-84 315.5 234 69.2
Glyma.19G017500 Glycine max HOM05D006434 ORTHO05D008069 8.5e-84 314.7 196 78.6
FAN09G0258 Fragaria x ananassa HOM05D006434 ORTHO05D008069 1.1e-83 314.3 238 70.2
CSS0001127 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 8.0e-82 308.1 221 71.0
CSS0033350 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 2.8e-79 299.7 213 71.8
Haze_14607 Corylus avellana HOM05D006434 ORTHO05D008069 3.7e-79 299.3 226 68.1
Nitab4.5_0003431g0070 Nicotiana tabacum HOM05D006434 ORTHO05D008069 2.7e-77 293.1 176 80.1
SalBow1G5247 Salvia bowleyana HOM05D006434 ORTHO05D008069 7.7e-77 291.6 339 51.0
AT3G28460 Arabidopsis thaliana HOM05D006434 ORTHO05D008069 1.5e-75 287.3 254 62.6
Prupe.3G275100 Prunus persica HOM05D006434 ORTHO05D008069 2.3e-73 280.0 213 69.5
Cpa.g.sc14.62 Carica papaya HOM05D006434 ORTHO05D008069 2.6e-72 276.6 176 78.4
Zm00001eb215320 Zea mays HOM05D006434 ORTHO05D008069 7.5e-72 275.0 262 56.5
Ca_04243_v3 Cicer arietinum L. HOM05D006434 ORTHO05D008069 5.4e-70 268.9 224 62.5
Pp3c7_630 Physcomitrium patens HOM05D006434 ORTHO05D008069 5.2e-65 252.3 219 58.9
SMO171G0075 Selaginella moellendorffii HOM05D006434 ORTHO05D008069 1.4e-62 244.2 201 59.7
CSS0043817 Camellia sinensis var. sinensis HOM05D006434 ORTHO05D008069 1.8e-62 243.8 187 67.4
AagrBONN_evm.TU.Sc2ySwM_344.3988 Anthoceros agrestis HOM05D006434 ORTHO05D008069 1.6e-61 240.7 196 61.7
Lj7A404T37 Lonicera japonica HOM05D006434 ORTHO05D008069 2.0e-61 240.4 232 57.3
Mapoly0140s0031 Marchantia polymorpha HOM05D006434 ORTHO05D008069 1.6e-58 230.7 210 56.2
MBI01_g13068_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 1.8e-57 227.3 183 63.4
Hund13291 Selenicereus undatus HOM05D006434 ORTHO05D008069 2.3e-52 210.3 189 59.8
CBR_g31858 Chara braunii HOM05D006434 ORTHO05D008069 2.3e-49 200.3 265 43.0
Cre13.g566300 Chlamydomonas reinhardtii HOM05D006434 ORTHO05D008069 8.1e-42 175.3 201 43.3
SEGI_25544 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 9.9e-40 168.3 157 54.8
PRCOL_00006620 Prasinoderma coloniale HOM05D006434 ORTHO05D008069 1.3e-39 167.9 221 40.7
SEGI_38692 Sequoiadendron giganteum HOM05D006434 ORTHO05D008069 1.9e-35 154.1 125 60.0
MCO03G139 Micromonas commoda HOM05D006434 ORTHO05D008069 5.4e-30 136.0 121 52.9
MBI01_g13070_MAGBIO Magnolia biondii HOM05D006434 ORTHO05D008069 3.9e-28 129.8 78 78.2
Solyc01g057060.1 Solanum lycopersicum HOM05D006434 ORTHO05D008069 9.6e-27 125.2 99 65.7
Sopen01g021310 Solanum pennellii HOM05D006434 ORTHO05D008069 1.2e-26 124.8 86 75.6
MD17G1044100 Malus domestica HOM05D006434 ORTHO05D008069 4.9e-23 112.8 60 90.0
TAR371G0222 Trochodendron aralioides HOM05D006434 ORTHO05D008069 6.0e-21 105.9 75 72.0
Lsat_1_v5_gn_7_34121 Lactuca sativa HOM05D006434 ORTHO05D008069 2.4e-09 67.4 37 83.8
Lj7A404T38 Lonicera japonica HOM05D006434 ORTHO05D008069 2.2e-07 60.8 134 32.1


User provided reference genes

Program Settings