Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_744.g24293 Utricularia gibba HOM05D006540 ORTHO05D008202 8.9e-50 199.9 97 100.0
unitig_21.g20872 Utricularia gibba HOM05D006540 ORTHO05D008202 3.2e-15 85.1 58 69.0
MBI10_g13027_MAGBIO Magnolia biondii HOM05D006540 ORTHO05D008202 4.3e-12 74.7 44 72.7
TAR622G1382 Trochodendron aralioides HOM05D006540 ORTHO05D008202 4.3e-12 74.7 44 72.7
TAR374G0845 Trochodendron aralioides HOM05D006540 ORTHO05D008202 9.7e-12 73.6 50 64.0
Cpa.g.sc33.16 Carica papaya HOM05D006540 ORTHO05D008202 1.3e-11 73.2 44 70.5
Gohir.A01G159600 Gossypium hirsutum HOM05D006540 ORTHO05D008202 1.6e-11 72.8 44 70.5
Oeu059907.1 Olea europaea HOM05D006540 ORTHO05D008202 1.6e-11 72.8 44 70.5
Actinidia15092 Actinidia chinensis HOM05D006540 ORTHO05D008202 2.2e-11 72.4 57 59.6
AUR62005459 Chenopodium quinoa HOM05D006540 ORTHO05D008202 2.2e-11 72.4 44 70.5
AUR62024282 Chenopodium quinoa HOM05D006540 ORTHO05D008202 2.2e-11 72.4 44 70.5
Cc11_g15700 Coffea canephora HOM05D006540 ORTHO05D008202 2.2e-11 72.4 44 70.5
COL.COLO4_24263 Corchorus olitorius HOM05D006540 ORTHO05D008202 2.2e-11 72.4 44 70.5
Dinv24788 Davidia involucrata HOM05D006540 ORTHO05D008202 2.2e-11 72.4 44 70.5
Gohir.D01G150500 Gossypium hirsutum HOM05D006540 ORTHO05D008202 2.2e-11 72.4 44 70.5
Gorai.002G186600 Gossypium raimondii HOM05D006540 ORTHO05D008202 2.2e-11 72.4 44 70.5
PGR102G2745 Punica granatum HOM05D006540 ORTHO05D008202 2.2e-11 72.4 44 70.5
Hma1.2p1_0223F.1_g093990 Hydrangea macrophylla HOM05D006540 ORTHO05D008202 3.7e-11 71.6 43 72.1
GSVIVG01004073001 Vitis vinifera HOM05D006540 ORTHO05D008202 3.7e-11 71.6 44 68.2
MSTRG.568 Avicennia marina HOM05D006540 ORTHO05D008202 4.8e-11 71.2 44 68.2
Duzib268G1404 Durio zibethinus HOM05D006540 ORTHO05D008202 4.8e-11 71.2 44 68.2
MD13G1101900 Malus domestica HOM05D006540 ORTHO05D008202 4.8e-11 71.2 44 68.2
SalBow2G2200 Salvia bowleyana HOM05D006540 ORTHO05D008202 4.8e-11 71.2 44 68.2
Thecc.02G259400 Theobroma cacao HOM05D006540 ORTHO05D008202 4.8e-11 71.2 44 68.2
PSO017G4849 Papaver somniferum HOM05D006540 ORTHO05D008202 8.2e-11 70.5 50 60.0
Potri.013G090000 Populus trichocarpa HOM05D006540 ORTHO05D008202 8.2e-11 70.5 44 65.9
Sabra13G0070200 Salix brachista HOM05D006540 ORTHO05D008202 8.2e-11 70.5 44 65.9
Sed0005489 Sechium edule HOM05D006540 ORTHO05D008202 8.2e-11 70.5 44 68.2
ATR0686G190 Amborella trichopoda HOM05D006540 ORTHO05D008202 1.1e-10 70.1 44 68.2
CiPaw.05G182700 Carya illinoinensis HOM05D006540 ORTHO05D008202 1.1e-10 70.1 44 68.2
Manes.13G024900 Manihot esculenta HOM05D006540 ORTHO05D008202 1.1e-10 70.1 44 65.9
THA.LOC104825662 Tarenaya hassleriana HOM05D006540 ORTHO05D008202 1.1e-10 70.1 44 65.9
CAN.G832.5 Capsicum annuum HOM05D006540 ORTHO05D008202 1.4e-10 69.7 44 65.9
ClCG05G025710 Citrullus lanatus HOM05D006540 ORTHO05D008202 1.4e-10 69.7 44 68.2
MELO3C011955.2 Cucumis melo HOM05D006540 ORTHO05D008202 1.4e-10 69.7 44 68.2
Duzib248G0112 Durio zibethinus HOM05D006540 ORTHO05D008202 1.4e-10 69.7 44 65.9
MD16G1102400 Malus domestica HOM05D006540 ORTHO05D008202 1.4e-10 69.7 44 65.9
Sc04g0009450 Simmondsia chinensis HOM05D006540 ORTHO05D008202 1.4e-10 69.7 44 65.9
PGSC0003DMG400018605 Solanum tuberosum HOM05D006540 ORTHO05D008202 1.4e-10 69.7 44 65.9
Atru.chr11.2104 Acer truncatum HOM05D006540 ORTHO05D008202 1.8e-10 69.3 44 63.6
Actinidia37429 Actinidia chinensis HOM05D006540 ORTHO05D008202 1.8e-10 69.3 44 68.2
CDE02G2769 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 1.8e-10 69.3 50 56.0
CDE09G1037 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 1.8e-10 69.3 50 56.0
Nitab4.5_0000007g0060 Nicotiana tabacum HOM05D006540 ORTHO05D008202 1.8e-10 69.3 44 63.6
Nitab4.5_0003628g0010 Nicotiana tabacum HOM05D006540 ORTHO05D008202 1.8e-10 69.3 44 63.6
Sopen05g008320 Solanum pennellii HOM05D006540 ORTHO05D008202 1.8e-10 69.3 44 63.6
Aa31LG2G5960 Aethionema arabicum HOM05D006540 ORTHO05D008202 2.4e-10 68.9 44 68.2
Eucgr.B03288 Eucalyptus grandis HOM05D006540 ORTHO05D008202 2.4e-10 68.9 44 65.9
Nn4g22628 Nelumbo nucifera HOM05D006540 ORTHO05D008202 2.4e-10 68.9 44 65.9
Ca_22583_v3 Cicer arietinum L. HOM05D006540 ORTHO05D008202 3.1e-10 68.6 44 63.6
Peaxi162Scf00128g00138 Petunia axillaris HOM05D006540 ORTHO05D008202 3.1e-10 68.6 44 63.6
Prupe.1G243900 Prunus persica HOM05D006540 ORTHO05D008202 3.1e-10 68.6 44 68.2
AL5G15370 Arabidopsis lyrata HOM05D006540 ORTHO05D008202 4.1e-10 68.2 44 65.9
AT3G26580 Arabidopsis thaliana HOM05D006540 ORTHO05D008202 4.1e-10 68.2 44 65.9
EL10Ac6g13801 Beta vulgaris HOM05D006540 ORTHO05D008202 4.1e-10 68.2 44 65.9
Carub.0005s0457 Capsella rubella HOM05D006540 ORTHO05D008202 4.1e-10 68.2 44 65.9
CsaV3_5G031170 Cucumis sativus L. HOM05D006540 ORTHO05D008202 4.1e-10 68.2 44 65.9
FvH4_4g25530 Fragaria vesca HOM05D006540 ORTHO05D008202 4.1e-10 68.2 50 58.0
FAN12G0822 Fragaria x ananassa HOM05D006540 ORTHO05D008202 4.1e-10 68.2 50 58.0
BcaB01g00564 Brassica carinata HOM05D006540 ORTHO05D008202 5.3e-10 67.8 44 63.6
Ah.03g133040 Amaranthus hybridus HOM05D006540 ORTHO05D008202 6.9e-10 67.4 44 63.6
CSS0000303 Camellia sinensis var. sinensis HOM05D006540 ORTHO05D008202 6.9e-10 67.4 44 63.6
Rhsim12G0041000 Rhododendron simsii HOM05D006540 ORTHO05D008202 6.9e-10 67.4 51 58.8
TWI18G0987 Tripterygium wilfordii HOM05D006540 ORTHO05D008202 6.9e-10 67.4 44 63.6
arahy.Tifrunner.gnm1.ann1.NX3C69 Arachis hypogaea HOM05D006540 ORTHO05D008202 9.0e-10 67.0 44 61.4
BcaC06g31063 Brassica carinata HOM05D006540 ORTHO05D008202 9.0e-10 67.0 44 63.6
BcaC06g33900 Brassica carinata HOM05D006540 ORTHO05D008202 9.0e-10 67.0 44 63.6
A06p41910 Brassica napus HOM05D006540 ORTHO05D008202 9.0e-10 67.0 44 63.6
C07p35560 Brassica napus HOM05D006540 ORTHO05D008202 9.0e-10 67.0 44 63.6
BolC7t44080H Brassica oleracea HOM05D006540 ORTHO05D008202 9.0e-10 67.0 44 63.6
BraA06t27110Z Brassica rapa HOM05D006540 ORTHO05D008202 9.0e-10 67.0 44 63.6
Cfa009208 Carpinus fangiana HOM05D006540 ORTHO05D008202 9.0e-10 67.0 44 63.6
Thhalv10004491m.g Eutrema salsugineum HOM05D006540 ORTHO05D008202 9.0e-10 67.0 44 63.6
PSO478G4529 Papaver somniferum HOM05D006540 ORTHO05D008202 9.0e-10 67.0 50 58.0
Sp2g15690 Schrenkiella parvula HOM05D006540 ORTHO05D008202 9.0e-10 67.0 44 63.6
Haze_12245 Corylus avellana HOM05D006540 ORTHO05D008202 1.2e-09 66.6 44 61.4
Migut.K00595 Erythranthe guttata HOM05D006540 ORTHO05D008202 1.2e-09 66.6 44 61.4
FAN07G1259 Fragaria x ananassa HOM05D006540 ORTHO05D008202 1.2e-09 66.6 44 63.6
FAN17G1845 Fragaria x ananassa HOM05D006540 ORTHO05D008202 1.2e-09 66.6 44 63.6
FAN22G2305 Fragaria x ananassa HOM05D006540 ORTHO05D008202 1.2e-09 66.6 44 63.6
Glyma.17G134500 Glycine max HOM05D006540 ORTHO05D008202 1.2e-09 66.6 44 63.6
Lalb_Chr05g0228421 Lupinus albus HOM05D006540 ORTHO05D008202 1.2e-09 66.6 44 61.4
RcHm_v2.0_Chr4g0432921 Rosa chinensis HOM05D006540 ORTHO05D008202 1.2e-09 66.6 44 63.6
DCAR_024432 Daucus carota HOM05D006540 ORTHO05D008202 1.5e-09 66.2 44 63.6
Lj4g0023216 Lotus japonicus HOM05D006540 ORTHO05D008202 1.5e-09 66.2 44 63.6
Medtr8g069450 Medicago truncatula HOM05D006540 ORTHO05D008202 1.5e-09 66.2 44 61.4
Psat4g116680 Pisum sativum HOM05D006540 ORTHO05D008202 1.5e-09 66.2 44 63.6
QL03p058139 Quercus lobata HOM05D006540 ORTHO05D008202 1.5e-09 66.2 44 61.4
Aqoxy3G01202 Aquilegia oxysepala HOM05D006540 ORTHO05D008202 2.6e-09 65.5 44 61.4
CARHR147570 Cardamine hirsuta HOM05D006540 ORTHO05D008202 2.6e-09 65.5 44 63.6
arahy.Tifrunner.gnm1.ann1.LD9JWE Arachis hypogaea HOM05D006540 ORTHO05D008202 3.4e-09 65.1 44 59.1
Lsat_1_v5_gn_8_152220 Lactuca sativa HOM05D006540 ORTHO05D008202 3.4e-09 65.1 44 61.4
Lj6A811T79 Lonicera japonica HOM05D006540 ORTHO05D008202 3.4e-09 65.1 44 61.4
Rhsim12G0110600 Rhododendron simsii HOM05D006540 ORTHO05D008202 3.4e-09 65.1 44 61.4
CANSAT35G0572 Cannabis sativa HOM05D006540 ORTHO05D008202 4.5e-09 64.7 44 61.4
Ciclev10032003m.g Citrus clementina HOM05D006540 ORTHO05D008202 4.5e-09 64.7 44 61.4
vmacro01127 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 4.5e-09 64.7 44 59.1
Os03g0428800 Oryza sativa ssp. japonica HOM05D006540 ORTHO05D008202 5.9e-09 64.3 51 56.9
Phvul.003G064400 Phaseolus vulgaris HOM05D006540 ORTHO05D008202 5.9e-09 64.3 44 59.1
VMungo0251G1250 Vigna mungo HOM05D006540 ORTHO05D008202 5.9e-09 64.3 44 59.1
ECA233G5619 Erigeron canadensis HOM05D006540 ORTHO05D008202 1.0e-08 63.5 44 59.1
vmacro16198 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 1.0e-08 63.5 44 59.1
Zm00001eb096140 Zea mays HOM05D006540 ORTHO05D008202 1.3e-08 63.2 44 59.1
HPP92_002022 Vanilla planifolia HOM05D006540 ORTHO05D008202 2.2e-08 62.4 53 52.8
HanXRQChr08g0208131 Helianthus annuus HOM05D006540 ORTHO05D008202 2.9e-08 62.0 44 56.8
SMO347G0417 Selaginella moellendorffii HOM05D006540 ORTHO05D008202 2.9e-08 62.0 44 56.8
Mapoly0037s0067 Marchantia polymorpha HOM05D006540 ORTHO05D008202 3.8e-08 61.6 44 56.8
TPR.G17765 Trifolium pratense HOM05D006540 ORTHO05D008202 5.0e-08 61.2 44 59.1
AagrBONN_evm.TU.Sc2ySwM_340.367 Anthoceros agrestis HOM05D006540 ORTHO05D008202 1.1e-07 60.1 44 54.5
SEGI_37038 Sequoiadendron giganteum HOM05D006540 ORTHO05D008202 4.6e-06 54.7 44 50.0


User provided reference genes

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