Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_744.g24207 Utricularia gibba HOM05D001568 ORTHO05D008804 1.6e-169 599.4 307 100.0
Migut.B00460 Erythranthe guttata HOM05D001568 ORTHO05D008804 2.1e-108 396.4 292 69.2
SalBow6G4520 Salvia bowleyana HOM05D001568 ORTHO05D008804 8.9e-104 380.9 305 63.6
CANSAT25G3386 Cannabis sativa HOM05D001568 ORTHO05D008804 2.0e-103 379.8 285 69.8
SGA_v2.0_scaffold225G43060 Striga asiatica HOM05D001568 ORTHO05D008804 2.0e-103 379.8 298 64.8
GSVIVG01037056001 Vitis vinifera HOM05D001568 ORTHO05D008804 2.9e-102 375.9 258 72.1
Hma1.2p1_0661F.1_g198113 Hydrangea macrophylla HOM05D001568 ORTHO05D008804 6.4e-102 374.8 260 70.0
Ciclev10030269m.g Citrus clementina HOM05D001568 ORTHO05D008804 8.4e-102 374.4 261 72.4
CSS0011887 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D008804 1.4e-101 373.6 267 70.8
Atru.chr5.2305 Acer truncatum HOM05D001568 ORTHO05D008804 2.4e-101 372.9 260 71.5
Manes.07G057400 Manihot esculenta HOM05D001568 ORTHO05D008804 4.2e-101 372.1 261 72.0
Prupe.8G149200 Prunus persica HOM05D001568 ORTHO05D008804 4.2e-101 372.1 288 66.7
Rhsim05G0092700 Rhododendron simsii HOM05D001568 ORTHO05D008804 5.4e-101 371.7 261 70.5
TWI14G1141 Tripterygium wilfordii HOM05D001568 ORTHO05D008804 9.3e-101 370.9 261 71.3
Cc00_g17990 Coffea canephora HOM05D001568 ORTHO05D008804 1.2e-100 370.5 266 67.7
Gorai.008G019500 Gossypium raimondii HOM05D001568 ORTHO05D008804 4.6e-100 368.6 258 69.8
FvH4_2g03440 Fragaria vesca HOM05D001568 ORTHO05D008804 6.0e-100 368.2 251 72.5
RcHm_v2.0_Chr6g0248601 Rosa chinensis HOM05D001568 ORTHO05D008804 1.3e-99 367.1 279 67.7
Thecc.02G119500 Theobroma cacao HOM05D001568 ORTHO05D008804 1.7e-99 366.7 258 70.2
Eucgr.I02493 Eucalyptus grandis HOM05D001568 ORTHO05D008804 3.0e-99 365.9 248 72.6
Gohir.A12G018701 Gossypium hirsutum HOM05D001568 ORTHO05D008804 3.0e-99 365.9 258 69.4
Solyc01g106880.3 Solanum lycopersicum HOM05D001568 ORTHO05D008804 3.9e-99 365.5 262 69.1
TPR.G21139 Trifolium pratense HOM05D001568 ORTHO05D008804 6.6e-99 364.8 258 69.0
TAR628G1281 Trochodendron aralioides HOM05D001568 ORTHO05D008804 8.7e-99 364.4 262 69.5
Potri.001G290100 Populus trichocarpa HOM05D001568 ORTHO05D008804 1.1e-98 364.0 287 66.2
EL10Ac9g22185 Beta vulgaris HOM05D001568 ORTHO05D008804 1.5e-98 363.6 261 69.3
Actinidia04394 Actinidia chinensis HOM05D001568 ORTHO05D008804 4.3e-98 362.1 261 69.0
CiPaw.05G020500 Carya illinoinensis HOM05D001568 ORTHO05D008804 4.3e-98 362.1 261 71.3
Sopen01g049160 Solanum pennellii HOM05D001568 ORTHO05D008804 4.3e-98 362.1 262 68.7
Nitab4.5_0001099g0070 Nicotiana tabacum HOM05D001568 ORTHO05D008804 1.3e-97 360.5 260 69.2
HanXRQChr03g0072921 Helianthus annuus HOM05D001568 ORTHO05D008804 2.1e-97 359.8 259 68.3
ECA240G3857 Erigeron canadensis HOM05D001568 ORTHO05D008804 3.6e-97 359.0 251 68.5
Medtr1g106055 Medicago truncatula HOM05D001568 ORTHO05D008804 2.4e-96 356.3 253 69.6
PSO017G1092 Papaver somniferum HOM05D001568 ORTHO05D008804 3.1e-96 355.9 253 68.8
Ca_11027_v3 Cicer arietinum L. HOM05D001568 ORTHO05D008804 6.9e-96 354.8 296 62.8
VMungo0720G2114 Vigna mungo HOM05D001568 ORTHO05D008804 9.0e-96 354.4 264 67.4
Haze_10309 Corylus avellana HOM05D001568 ORTHO05D008804 1.5e-95 353.6 259 69.1
MELO3C018530.2 Cucumis melo HOM05D001568 ORTHO05D008804 3.4e-95 352.4 264 67.8
Nitab4.5_0010145g0020 Nicotiana tabacum HOM05D001568 ORTHO05D008804 3.4e-95 352.4 298 62.8
Aqoxy1G00265 Aquilegia oxysepala HOM05D001568 ORTHO05D008804 4.5e-95 352.1 255 69.0
Lalb_Chr06g0165001 Lupinus albus HOM05D001568 ORTHO05D008804 7.6e-95 351.3 262 66.8
PSO170G6576 Papaver somniferum HOM05D001568 ORTHO05D008804 9.9e-95 350.9 260 67.3
Lj1g0020001 Lotus japonicus HOM05D001568 ORTHO05D008804 2.2e-94 349.7 262 67.6
Glyma.20G135600 Glycine max HOM05D001568 ORTHO05D008804 8.4e-94 347.8 264 66.7
CDE04G1257 Ceratophyllum demersum HOM05D001568 ORTHO05D008804 1.9e-93 346.7 253 68.8
CsaV3_7G007700 Cucumis sativus L. HOM05D001568 ORTHO05D008804 5.4e-93 345.1 258 67.1
QL11p029473 Quercus lobata HOM05D001568 ORTHO05D008804 7.1e-93 344.7 316 58.2
COL.COLO4_32489 Corchorus olitorius HOM05D001568 ORTHO05D008804 1.2e-92 344.0 258 66.3
Sc14g0002500 Simmondsia chinensis HOM05D001568 ORTHO05D008804 2.7e-92 342.8 252 68.7
BcaB07g33452 Brassica carinata HOM05D001568 ORTHO05D008804 4.6e-92 342.0 248 68.5
Lj9A337T44 Lonicera japonica HOM05D001568 ORTHO05D008804 4.6e-92 342.0 228 70.6
DCAR_001738 Daucus carota HOM05D001568 ORTHO05D008804 7.9e-92 341.3 288 60.4
Nn5g30645 Nelumbo nucifera HOM05D001568 ORTHO05D008804 1.0e-91 340.9 253 65.6
AL1G57570 Arabidopsis lyrata HOM05D001568 ORTHO05D008804 5.1e-91 338.6 271 64.2
CAN.G606.69 Capsicum annuum HOM05D001568 ORTHO05D008804 6.6e-91 338.2 310 58.7
THA.LOC104826496 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 1.1e-90 337.4 280 63.2
AT1G50000 Arabidopsis thaliana HOM05D001568 ORTHO05D008804 1.5e-90 337.0 271 63.8
Sp1g36840 Schrenkiella parvula HOM05D001568 ORTHO05D008804 1.9e-90 336.7 262 64.9
SpUn0137_0040 Schrenkiella parvula HOM05D001568 ORTHO05D008804 1.9e-90 336.7 262 64.9
Carub.0151s0002 Capsella rubella HOM05D001568 ORTHO05D008804 3.3e-90 335.9 255 65.9
ATR0739G203 Amborella trichopoda HOM05D001568 ORTHO05D008804 9.6e-90 334.3 256 64.5
THA.LOC104826495 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 1.6e-89 333.6 265 64.2
Os03g0729700 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D008804 2.1e-89 333.2 265 63.0
BcaC08g43178 Brassica carinata HOM05D001568 ORTHO05D008804 2.8e-89 332.8 275 62.9
FAN15G2988 Fragaria x ananassa HOM05D001568 ORTHO05D008804 2.8e-89 332.8 229 71.6
arahy.Tifrunner.gnm1.ann1.ESII2D Arachis hypogaea HOM05D001568 ORTHO05D008804 8.1e-89 331.3 228 71.1
arahy.Tifrunner.gnm1.ann1.804FU2 Arachis hypogaea HOM05D001568 ORTHO05D008804 3.1e-88 329.3 228 70.2
Lsat_1_v5_gn_9_113380 Lactuca sativa HOM05D001568 ORTHO05D008804 3.1e-88 329.3 251 66.5
A06p03430 Brassica napus HOM05D001568 ORTHO05D008804 6.9e-88 328.2 274 63.5
MD10G1109100 Malus domestica HOM05D001568 ORTHO05D008804 9.0e-88 327.8 228 69.7
Cfa004706 Carpinus fangiana HOM05D001568 ORTHO05D008804 2.0e-87 326.6 261 66.3
C06p04780 Brassica napus HOM05D001568 ORTHO05D008804 2.6e-87 326.2 276 62.7
BolC6t35607H Brassica oleracea HOM05D001568 ORTHO05D008804 2.6e-87 326.2 276 62.7
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 3.4e-87 325.9 271 62.0
MBI16_g16470_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D008804 3.4e-87 325.9 227 70.5
Cfa004705 Carpinus fangiana HOM05D001568 ORTHO05D008804 9.9e-87 324.3 227 70.9
Gohir.D12G019200 Gossypium hirsutum HOM05D001568 ORTHO05D008804 3.8e-86 322.4 258 63.6
BraA06t23551Z Brassica rapa HOM05D001568 ORTHO05D008804 1.4e-85 320.5 305 58.7
ClCG02G007120 Citrullus lanatus HOM05D001568 ORTHO05D008804 5.5e-85 318.5 255 64.7
HPP92_026588 Vanilla planifolia HOM05D001568 ORTHO05D008804 1.8e-83 313.5 262 61.1
Thhalv10011739m.g Eutrema salsugineum HOM05D001568 ORTHO05D008804 9.6e-82 307.8 230 66.1
Peaxi162Scf00016g03020 Petunia axillaris HOM05D001568 ORTHO05D008804 2.8e-81 306.2 254 61.0
Hma1.2p1_0661F.1_g198116 Hydrangea macrophylla HOM05D001568 ORTHO05D008804 2.0e-79 300.1 202 72.3
CARHR040100 Cardamine hirsuta HOM05D001568 ORTHO05D008804 2.7e-76 289.7 216 67.6
Phvul.007G046900 Phaseolus vulgaris HOM05D001568 ORTHO05D008804 1.8e-75 287.0 218 65.1
AUR62027019 Chenopodium quinoa HOM05D001568 ORTHO05D008804 5.1e-75 285.4 216 66.2
Aa31LG10G4130 Aethionema arabicum HOM05D001568 ORTHO05D008804 2.8e-73 279.6 206 68.4
vmacro22256 Vaccinium macrocarpon HOM05D001568 ORTHO05D009161 9.0e-72 274.6 264 56.8
AUR62030859 Chenopodium quinoa HOM05D001568 ORTHO05D008804 1.2e-71 274.2 204 66.7
PGR142G1084 Punica granatum HOM05D001568 ORTHO05D008804 1.5e-71 273.9 201 67.2
AagrBONN_evm.TU.Sc2ySwM_362.475 Anthoceros agrestis HOM05D001568 ORTHO05D008804 1.1e-69 267.7 245 56.3
Psat6g214440 Pisum sativum HOM05D001568 ORTHO05D008804 3.6e-68 262.7 187 70.6
Mapoly0081s0053 Marchantia polymorpha HOM05D001568 ORTHO05D008804 1.1e-66 257.7 255 50.6
Pp3c3_17050 Physcomitrium patens HOM05D001568 ORTHO05D008804 1.1e-64 251.1 270 50.0
Ah.01g007040 Amaranthus hybridus HOM05D001568 ORTHO05D008804 1.0e-62 244.6 183 62.8
Sed0001597 Sechium edule HOM05D001568 ORTHO05D008804 1.1e-61 241.1 258 52.7
Sabra16G0181700 Salix brachista HOM05D001568 ORTHO05D008804 3.6e-60 236.1 213 59.2
SMO358G0428 Selaginella moellendorffii HOM05D001568 ORTHO05D008804 2.3e-59 233.4 246 50.8
THA.LOC104809178 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 3.0e-59 233.0 163 70.6
CBR_g48696 Chara braunii HOM05D001568 ORTHO05D008804 3.7e-57 226.1 245 48.2
FAN24G1144 Fragaria x ananassa HOM05D001568 ORTHO05D008804 4.8e-57 225.7 197 63.5
Aqoxy335s004 Aquilegia oxysepala HOM05D001568 ORTHO05D008804 1.6e-44 184.1 134 70.1
TAR376G0809 Trochodendron aralioides HOM05D001568 ORTHO05D008804 6.3e-41 172.2 252 42.1
Manes.10G086502 Manihot esculenta HOM05D001568 ORTHO05D008804 8.2e-41 171.8 258 39.9
MCO02G312 Micromonas commoda HOM05D001568 ORTHO05D008804 2.8e-33 146.7 192 42.2
FAN24G0164 Fragaria x ananassa HOM05D001568 ORTHO05D008804 1.2e-31 141.4 111 60.4
MSTRG.20236 Avicennia marina HOM05D001568 ORTHO05D008804 2.8e-28 130.2 99 62.6
Cre03.g175800 Chlamydomonas reinhardtii HOM05D001568 ORTHO05D008804 1.1e-24 118.2 339 28.9
Thhalv10012254m.g Eutrema salsugineum HOM05D001568 ORTHO05D008804 3.1e-24 116.7 99 58.6
PRCOL_00000434 Prasinoderma coloniale HOM05D001568 ORTHO05D008804 8.6e-22 108.6 299 30.4
RhsimUnG0183700 Rhododendron simsii HOM05D002338 ORTHO05D006706 1.6e-15 87.8 103 47.6
Rhsim05G0092200 Rhododendron simsii HOM05D001568 ORTHO05D004404 4.6e-15 86.3 102 47.1
Ah.01g007020 Amaranthus hybridus HOM05D001568 ORTHO05D008804 2.0e-10 70.9 46 76.1
RcHm_v2.0_Chr6g0248571 Rosa chinensis HOM05D001568 ORTHO05D008804 3.7e-09 66.6 76 51.3
C05p34140 Brassica napus HOM05D001568 ORTHO05D019891 3.0e-06 57.0 50 54.0
BcaC05g27454 Brassica carinata HOM05D001568 ORTHO05D019891 5.0e-06 56.2 50 52.0
BcaC05g27456 Brassica carinata HOM05D001568 ORTHO05D019891 5.0e-06 56.2 50 52.0
BolC5t32148H Brassica oleracea HOM05D058656 ORTHO05D019891 5.0e-06 56.2 50 52.0


User provided reference genes

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