Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_744.g23984 Utricularia gibba HOM05D006599 ORTHO05D008304 1.5e-144 516.2 250 100.0
MSTRG.23889 Avicennia marina HOM05D006599 ORTHO05D008304 9.2e-99 364.0 250 69.2
Migut.H00636 Erythranthe guttata HOM05D006599 ORTHO05D008304 2.5e-96 355.9 250 66.4
CSS0025230 Camellia sinensis var. sinensis HOM05D006599 ORTHO05D008304 3.2e-91 339.0 250 63.2
Thecc.04G093300 Theobroma cacao HOM05D006599 ORTHO05D008304 2.7e-90 335.9 250 61.2
COL.COLO4_21402 Corchorus olitorius HOM05D006599 ORTHO05D008304 6.0e-90 334.7 250 60.4
QL02p067958 Quercus lobata HOM05D006599 ORTHO05D008304 6.6e-89 331.3 246 60.6
Nn4g23391 Nelumbo nucifera HOM05D006599 ORTHO05D008304 1.5e-88 330.1 250 59.2
Nitab4.5_0010051g0050 Nicotiana tabacum HOM05D006599 ORTHO05D008304 3.3e-88 328.9 251 62.2
Nitab4.5_0000565g0260 Nicotiana tabacum HOM05D006599 ORTHO05D008304 4.3e-88 328.6 251 62.2
Gohir.A09G010100 Gossypium hirsutum HOM05D006599 ORTHO05D008304 7.3e-88 327.8 250 60.8
CAN.G206.218 Capsicum annuum HOM05D006599 ORTHO05D008304 9.6e-88 327.4 251 61.0
Gohir.A11G072300 Gossypium hirsutum HOM05D006599 ORTHO05D008304 9.6e-88 327.4 250 60.8
Duzib147G0316 Durio zibethinus HOM05D006599 ORTHO05D008304 1.2e-87 327.0 250 60.8
Potri.004G119500 Populus trichocarpa HOM05D006599 ORTHO05D008304 1.2e-87 327.0 250 60.8
Gohir.D09G009200 Gossypium hirsutum HOM05D006599 ORTHO05D008304 1.6e-87 326.6 250 60.4
Nn3g17418 Nelumbo nucifera HOM05D006599 ORTHO05D008304 1.6e-87 326.6 246 58.9
Gorai.006G010900 Gossypium raimondii HOM05D006599 ORTHO05D008304 2.1e-87 326.2 250 60.4
TAR629G1530 Trochodendron aralioides HOM05D006599 ORTHO05D008304 2.1e-87 326.2 244 59.0
Cc07_g04100 Coffea canephora HOM05D006599 ORTHO05D008304 2.8e-87 325.9 251 60.2
Gohir.D11G076400 Gossypium hirsutum HOM05D006599 ORTHO05D008304 3.6e-87 325.5 250 60.4
Gorai.007G082000 Gossypium raimondii HOM05D006599 ORTHO05D008304 3.6e-87 325.5 250 60.4
FvH4_6g47020 Fragaria vesca HOM05D006599 ORTHO05D008304 4.7e-87 325.1 250 59.6
FAN14G4927 Fragaria x ananassa HOM05D006599 ORTHO05D008304 4.7e-87 325.1 250 59.6
Prupe.3G256500 Prunus persica HOM05D006599 ORTHO05D008304 4.7e-87 325.1 250 58.4
FAN02G1129 Fragaria x ananassa HOM05D006599 ORTHO05D008304 1.4e-86 323.6 250 59.2
Hma1.2p1_0481F.1_g162060 Hydrangea macrophylla HOM05D006599 ORTHO05D008304 1.4e-86 323.6 251 61.8
MELO3C013909.2 Cucumis melo HOM05D006599 ORTHO05D008304 1.8e-86 323.2 250 59.6
Rhsim08G0074600 Rhododendron simsii HOM05D006599 ORTHO05D008304 3.1e-86 322.4 250 58.4
TWI34G0408 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 4.0e-86 322.0 250 57.6
Atru.chr8.423 Acer truncatum HOM05D006599 ORTHO05D008304 5.2e-86 321.6 250 58.8
Potri.017G092800 Populus trichocarpa HOM05D006599 ORTHO05D008304 5.2e-86 321.6 246 60.6
PGSC0003DMG400001449 Solanum tuberosum HOM05D006599 ORTHO05D008304 5.2e-86 321.6 251 60.6
TWI32G0394 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 5.2e-86 321.6 250 58.0
GSVIVG01032932001 Vitis vinifera HOM05D006599 ORTHO05D008304 5.2e-86 321.6 250 58.8
arahy.Tifrunner.gnm1.ann1.CT2P3Y Arachis hypogaea HOM05D006599 ORTHO05D008304 6.9e-86 321.2 252 58.3
ClCG07G007400 Citrullus lanatus HOM05D006599 ORTHO05D008304 6.9e-86 321.2 250 60.0
Solyc02g088730.2 Solanum lycopersicum HOM05D006599 ORTHO05D008304 6.9e-86 321.2 251 60.6
FAN09G1977 Fragaria x ananassa HOM05D006599 ORTHO05D008304 8.9e-86 320.9 250 58.8
arahy.Tifrunner.gnm1.ann1.24WTBT Arachis hypogaea HOM05D006599 ORTHO05D008304 1.2e-85 320.5 252 57.9
Sc14g0006220 Simmondsia chinensis HOM05D006599 ORTHO05D008304 1.2e-85 320.5 250 58.8
SGA_v2.0_scaffold52G19170 Striga asiatica HOM05D006599 ORTHO05D008304 1.5e-85 320.1 251 62.2
CsaV3_3G002390 Cucumis sativus L. HOM05D006599 ORTHO05D008304 2.0e-85 319.7 250 59.2
Sopen02g033440 Solanum pennellii HOM05D006599 ORTHO05D008304 2.0e-85 319.7 251 60.2
Manes.02G054000 Manihot esculenta HOM05D006599 ORTHO05D008304 3.4e-85 318.9 250 59.2
CiPaw.03G089500 Carya illinoinensis HOM05D006599 ORTHO05D008304 4.4e-85 318.5 250 57.6
CANSAT64G1926 Cannabis sativa HOM05D006599 ORTHO05D008304 5.8e-85 318.2 254 58.3
DCAR_025424 Daucus carota HOM05D006599 ORTHO05D008304 5.8e-85 318.2 250 58.0
Oeu047780.1 Olea europaea HOM05D006599 ORTHO05D008304 1.3e-84 317.0 250 58.8
Peaxi162Scf00166g00058 Petunia axillaris HOM05D006599 ORTHO05D008304 1.3e-84 317.0 251 60.2
Cfa007654 Carpinus fangiana HOM05D006599 ORTHO05D008304 2.2e-84 316.2 250 57.6
RcHm_v2.0_Chr2g0166081 Rosa chinensis HOM05D006599 ORTHO05D008304 2.9e-84 315.8 250 58.4
Ciclev10012597m.g Citrus clementina HOM05D006599 ORTHO05D008304 3.8e-84 315.5 250 59.6
HanXRQChr17g0546571 Helianthus annuus HOM05D006599 ORTHO05D008304 3.8e-84 315.5 250 58.4
Sabra04G0069000 Salix brachista HOM05D006599 ORTHO05D008304 4.9e-84 315.1 250 58.8
Sabra17G0081900 Salix brachista HOM05D006599 ORTHO05D008304 6.4e-84 314.7 246 59.3
THA.LOC104823890 Tarenaya hassleriana HOM05D006599 ORTHO05D008304 8.4e-84 314.3 250 58.8
Ca_04338_v3 Cicer arietinum L. HOM05D006599 ORTHO05D008304 1.4e-83 313.5 252 57.5
Lalb_Chr17g0337021 Lupinus albus HOM05D006599 ORTHO05D008304 2.4e-83 312.8 252 58.7
PGR083G1582 Punica granatum HOM05D006599 ORTHO05D008304 4.2e-83 312.0 250 56.8
Glyma.18G265500 Glycine max HOM05D006599 ORTHO05D008304 5.4e-83 311.6 252 57.1
Psat3g201440 Pisum sativum HOM05D006599 ORTHO05D008304 7.1e-83 311.2 252 56.3
Phvul.008G034600 Phaseolus vulgaris HOM05D006599 ORTHO05D008304 1.2e-82 310.5 252 57.5
Medtr7g013160 Medicago truncatula HOM05D006599 ORTHO05D008304 2.1e-82 309.7 252 56.3
Sed0027615 Sechium edule HOM05D006599 ORTHO05D008304 2.1e-82 309.7 247 58.3
Lsat_1_v5_gn_3_98261 Lactuca sativa HOM05D006599 ORTHO05D008304 3.5e-82 308.9 249 56.2
Oeu035439.1 Olea europaea HOM05D006599 ORTHO05D008304 3.5e-82 308.9 250 58.0
AT5G39250 Arabidopsis thaliana HOM05D006599 ORTHO05D008304 6.0e-82 308.1 253 57.7
AUR62029230 Chenopodium quinoa HOM05D006599 ORTHO05D008304 6.0e-82 308.1 245 57.6
BcaB06g27283 Brassica carinata HOM05D006599 ORTHO05D008304 7.8e-82 307.8 252 56.7
VMungo1383G0637 Vigna mungo HOM05D006599 ORTHO05D008304 1.0e-81 307.4 252 56.7
A04p11970 Brassica napus HOM05D006599 ORTHO05D008304 1.7e-81 306.6 252 56.3
C04p45620 Brassica napus HOM05D006599 ORTHO05D008304 1.7e-81 306.6 252 56.3
BolC4t26144H Brassica oleracea HOM05D006599 ORTHO05D008304 1.7e-81 306.6 252 56.3
BraA04t16862Z Brassica rapa HOM05D006599 ORTHO05D008304 1.7e-81 306.6 252 56.3
ECA232G1145 Erigeron canadensis HOM05D006599 ORTHO05D008304 1.7e-81 306.6 250 57.6
Lj1g0001712 Lotus japonicus HOM05D006599 ORTHO05D008304 1.7e-81 306.6 252 56.0
BcaC02g09687 Brassica carinata HOM05D006599 ORTHO05D008304 2.3e-81 306.2 252 56.3
Thhalv10027896m.g Eutrema salsugineum HOM05D006599 ORTHO05D008304 6.6e-81 304.7 252 56.7
Aa31LG9G16680 Aethionema arabicum HOM05D006599 ORTHO05D008304 8.7e-81 304.3 252 57.1
AUR62022778 Chenopodium quinoa HOM05D006599 ORTHO05D008304 1.1e-80 303.9 245 58.4
Aqoxy3G00501 Aquilegia oxysepala HOM05D006599 ORTHO05D008304 2.5e-80 302.8 246 54.9
CARHR263160 Cardamine hirsuta HOM05D006599 ORTHO05D008304 3.3e-80 302.4 252 56.3
PSO017G0459 Papaver somniferum HOM05D006599 ORTHO05D008304 4.3e-80 302.0 250 56.0
Carub.0007s3667 Capsella rubella HOM05D006599 ORTHO05D008304 7.3e-80 301.2 252 57.1
TPR.G33427 Trifolium pratense HOM05D006599 ORTHO05D008304 7.3e-80 301.2 252 55.6
AL7G51210 Arabidopsis lyrata HOM05D006599 ORTHO05D008304 1.3e-79 300.4 252 56.7
MD09G1064500 Malus domestica HOM05D006599 ORTHO05D008304 2.8e-79 299.3 250 56.0
PSO478G2235 Papaver somniferum HOM05D006599 ORTHO05D008304 6.2e-79 298.1 251 55.0
Eucgr.J01379 Eucalyptus grandis HOM05D006599 ORTHO05D008304 4.0e-78 295.4 248 53.2
Sp7g02740 Schrenkiella parvula HOM05D006599 ORTHO05D008304 4.0e-78 295.4 252 55.2
Thecc.04G093200 Theobroma cacao HOM05D006599 ORTHO05D008304 4.0e-78 295.4 250 56.0
HanXRQChr17g0551751 Helianthus annuus HOM05D006599 ORTHO05D008304 3.4e-77 292.4 250 54.0
Peaxi162Scf00451g00012 Petunia axillaris HOM05D006599 ORTHO05D008304 1.2e-74 283.9 239 56.9
Manes.01G097300 Manihot esculenta HOM05D006599 ORTHO05D008304 1.1e-72 277.3 228 56.6
Glyma.08G243300 Glycine max HOM05D006599 ORTHO05D008304 1.3e-71 273.9 262 51.9
ATR0064G081 Amborella trichopoda HOM05D006599 ORTHO05D008304 3.1e-70 269.2 246 51.2
HPP92_009527 Vanilla planifolia HOM05D006599 ORTHO05D008304 1.9e-67 260.0 247 51.4
CDE10G0620 Ceratophyllum demersum HOM05D006599 ORTHO05D008304 2.4e-67 259.6 237 47.7
SHI25645 Sapria himalayana HOM05D006599 ORTHO05D008304 3.2e-67 259.2 245 51.4
HPP92_009554 Vanilla planifolia HOM05D006599 ORTHO05D008304 5.5e-67 258.5 247 51.0
Os03g0423000 Oryza sativa ssp. japonica HOM05D006599 ORTHO05D008304 3.0e-65 252.7 249 47.8
Zm00001eb020180 Zea mays HOM05D006599 ORTHO05D008304 1.5e-64 250.4 248 48.8
Haze_14439 Corylus avellana HOM05D006599 ORTHO05D008304 3.1e-62 242.7 201 55.7
Pp3c13_10960 Physcomitrium patens HOM05D006599 ORTHO05D008304 4.9e-60 235.3 250 46.8
Mapoly0038s0100 Marchantia polymorpha HOM05D006599 ORTHO05D008304 1.5e-56 223.8 249 42.2
SMO347G0158 Selaginella moellendorffii HOM05D006599 ORTHO05D008304 1.3e-52 210.7 267 41.9
Dinv34953 Davidia involucrata HOM05D006599 ORTHO05D008304 1.6e-47 193.7 134 65.7
Lsat_1_v5_gn_7_2780 Lactuca sativa HOM05D006599 ORTHO05D008304 1.7e-44 183.7 259 44.8
FAN05G2816 Fragaria x ananassa HOM05D006599 ORTHO05D008304 2.6e-40 169.9 154 49.4
Peaxi162Scf00451g00005 Petunia axillaris HOM05D006599 ORTHO05D008304 2.2e-39 166.8 286 38.5
Dinv33823 Davidia involucrata HOM05D006599 ORTHO05D008304 5.9e-37 158.7 99 72.7
Lj4E117T1 Lonicera japonica HOM05D006599 ORTHO05D008304 1.1e-30 137.9 111 55.9
Lalb_Chr10g0093051 Lupinus albus HOM05D006599 ORTHO05D008304 1.7e-28 130.6 95 60.0
PGSC0003DMG400031200 Solanum tuberosum HOM05D006599 ORTHO05D008304 4.2e-19 99.4 89 56.2
EL10Ac9g22551 Beta vulgaris HOM05D006599 ORTHO05D008304 7.5e-16 88.6 71 53.5
Peaxi162Scf00270g00422 Petunia axillaris HOM05D006599 ORTHO05D008304 2.8e-15 86.7 161 37.3
Lalb_Chr10g0093041 Lupinus albus HOM05D006599 ORTHO05D008304 1.8e-09 67.4 53 52.8
Mapoly0033s0082 Marchantia polymorpha HOM05D027965 ORTHO05D048753 5.7e-08 62.4 142 31.0
TPR.G10380 Trifolium pratense HOM05D006599 ORTHO05D008304 3.7e-07 59.7 45 62.2
Mapoly0033s0071 Marchantia polymorpha HOM05D006599 ORTHO05D008304 1.1e-06 58.2 111 33.3
MD17G1057800 Malus domestica HOM05D006599 ORTHO05D008304 3.1e-06 56.6 50 44.0


User provided reference genes

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