Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_736.g22974 Utricularia gibba HOM05D006993 ORTHO05D008336 5.9e-89 330.9 172 100.0
MSTRG.18520 Avicennia marina HOM05D006993 ORTHO05D008336 9.3e-50 200.7 170 63.5
Oeu013422.3 Olea europaea HOM05D006993 ORTHO05D008336 1.1e-47 193.7 159 62.9
TAR626G0971 Trochodendron aralioides HOM05D006993 ORTHO05D008336 1.4e-45 186.8 153 64.1
Migut.D00756 Erythranthe guttata HOM05D006993 ORTHO05D008336 3.1e-45 185.7 172 58.1
Gohir.A11G146100 Gossypium hirsutum HOM05D006993 ORTHO05D008336 4.0e-45 185.3 159 62.9
Gorai.007G162900 Gossypium raimondii HOM05D006993 ORTHO05D008336 4.0e-45 185.3 159 62.9
Thecc.01G203600 Theobroma cacao HOM05D006993 ORTHO05D008336 5.3e-45 184.9 169 59.8
GSVIVG01006115001 Vitis vinifera HOM05D006993 ORTHO05D008336 9.0e-45 184.1 153 64.7
Duzib211G0651 Durio zibethinus HOM05D006993 ORTHO05D008336 2.0e-44 183.0 169 58.6
Manes.13G058300 Manihot esculenta HOM05D006993 ORTHO05D008336 4.5e-44 181.8 168 58.3
TPR.G5057 Trifolium pratense HOM05D006993 ORTHO05D008336 1.7e-43 179.9 153 62.1
CANSAT11G1969 Cannabis sativa HOM05D006993 ORTHO05D008336 6.4e-43 177.9 154 60.4
Actinidia23138 Actinidia chinensis HOM05D006993 ORTHO05D008336 1.1e-42 177.2 151 63.6
MD00G1144800 Malus domestica HOM05D006993 ORTHO05D008336 1.1e-42 177.2 168 54.8
Medtr8g028100 Medicago truncatula HOM05D006993 ORTHO05D008336 1.1e-42 177.2 159 61.0
BcaC06g35821 Brassica carinata HOM05D006993 ORTHO05D008336 1.4e-42 176.8 153 61.4
BolC7t41517H Brassica oleracea HOM05D006993 ORTHO05D008336 1.4e-42 176.8 153 61.4
Lsat_1_v5_gn_9_15700 Lactuca sativa HOM05D006993 ORTHO05D008336 1.9e-42 176.4 155 60.6
A07p06910 Brassica napus HOM05D006993 ORTHO05D008336 2.4e-42 176.0 153 60.8
C07p10500 Brassica napus HOM05D006993 ORTHO05D008336 2.4e-42 176.0 153 61.4
BraA07t28482Z Brassica rapa HOM05D006993 ORTHO05D008336 2.4e-42 176.0 153 60.8
Duzib138G1606 Durio zibethinus HOM05D006993 ORTHO05D008336 2.4e-42 176.0 169 56.2
QL09p044784 Quercus lobata HOM05D006993 ORTHO05D008336 3.2e-42 175.6 153 62.7
Oeu049571.1 Olea europaea HOM05D006993 ORTHO05D008336 4.2e-42 175.3 159 58.5
SalBow2G0576 Salvia bowleyana HOM05D006993 ORTHO05D008336 7.1e-42 174.5 110 74.5
Potri.014G172800 Populus trichocarpa HOM05D006993 ORTHO05D008336 2.1e-41 172.9 177 54.2
AL3G41710 Arabidopsis lyrata HOM05D006993 ORTHO05D008336 2.7e-41 172.6 153 58.8
CSS0002802 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 3.5e-41 172.2 158 60.1
Nitab4.5_0009028g0040 Nicotiana tabacum HOM05D006993 ORTHO05D008336 3.5e-41 172.2 168 56.5
ATR0751G064 Amborella trichopoda HOM05D006993 ORTHO05D008336 4.6e-41 171.8 164 56.7
Thhalv10002670m.g Eutrema salsugineum HOM05D006993 ORTHO05D008336 6.0e-41 171.4 155 59.4
Cc01_g15720 Coffea canephora HOM05D006993 ORTHO05D008336 7.9e-41 171.0 109 75.2
MBI15_g35689_MAGBIO Magnolia biondii HOM05D006993 ORTHO05D008336 7.9e-41 171.0 113 72.6
Prupe.5G011000 Prunus persica HOM05D006993 ORTHO05D008336 7.9e-41 171.0 163 54.6
Solyc09g018890.3 Solanum lycopersicum HOM05D006993 ORTHO05D008336 7.9e-41 171.0 154 58.4
Lj3g0006688 Lotus japonicus HOM05D006993 ORTHO05D008336 1.0e-40 170.6 154 61.0
Aqoxy4G02329 Aquilegia oxysepala HOM05D006993 ORTHO05D008336 3.0e-40 169.1 153 57.5
Cpa.g.sc8.8 Carica papaya HOM05D006993 ORTHO05D008336 3.0e-40 169.1 123 66.7
HanXRQChr08g0230791 Helianthus annuus HOM05D006993 ORTHO05D008336 3.0e-40 169.1 160 57.5
PSO675G6922 Papaver somniferum HOM05D006993 ORTHO05D008336 3.0e-40 169.1 163 55.8
AT2G04039 Arabidopsis thaliana HOM05D006993 ORTHO05D008336 3.9e-40 168.7 156 59.6
CSS0020795 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 3.9e-40 168.7 152 57.9
vmacro02850 Vaccinium macrocarpon HOM05D006993 ORTHO05D008336 6.7e-40 167.9 153 57.5
Atru.chr6.3467 Acer truncatum HOM05D006993 ORTHO05D008336 8.7e-40 167.5 155 57.4
CAN.G3.14 Capsicum annuum HOM05D006993 ORTHO05D008336 8.7e-40 167.5 160 58.8
Nn1g08444 Nelumbo nucifera HOM05D006993 ORTHO05D008336 1.1e-39 167.2 104 76.0
DCAR_018599 Daucus carota HOM05D000190 ORTHO05D008336 1.5e-39 166.8 112 70.5
CDE03G0427 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 1.9e-39 166.4 129 65.9
Lj2A1109T68 Lonicera japonica HOM05D006993 ORTHO05D008336 1.9e-39 166.4 113 70.8
ECA247G3631 Erigeron canadensis HOM05D006993 ORTHO05D008336 2.5e-39 166.0 160 59.4
CSS0028614 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 3.3e-39 165.6 158 59.5
Sed0005772 Sechium edule HOM05D006993 ORTHO05D008336 3.3e-39 165.6 148 60.1
CsaV3_5G035360 Cucumis sativus L. HOM05D006993 ORTHO05D008336 4.3e-39 165.2 171 52.6
MELO3C012348.2 Cucumis melo HOM05D006993 ORTHO05D008336 5.6e-39 164.9 171 53.8
Potri.002G217400 Populus trichocarpa HOM05D006993 ORTHO05D008336 5.6e-39 164.9 107 72.0
arahy.Tifrunner.gnm1.ann1.RC1IE0 Arachis hypogaea HOM05D006993 ORTHO05D008336 7.4e-39 164.5 110 72.7
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 7.4e-39 164.5 155 58.1
Sp3g23040 Schrenkiella parvula HOM05D006993 ORTHO05D008336 7.4e-39 164.5 115 70.4
BcaB06g26751 Brassica carinata HOM05D006993 ORTHO05D008336 9.6e-39 164.1 153 58.2
FvH4_5g27060 Fragaria vesca HOM05D006993 ORTHO05D008336 1.3e-38 163.7 167 52.7
COL.COLO4_19719 Corchorus olitorius HOM05D006993 ORTHO05D008336 1.6e-38 163.3 169 52.7
CSS0001652 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 2.8e-38 162.5 153 58.2
Sopen09g012650 Solanum pennellii HOM05D006993 ORTHO05D008336 2.8e-38 162.5 154 57.1
TWI18G0796 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 2.8e-38 162.5 115 66.1
Aa31sc249G30 Aethionema arabicum HOM05D006993 ORTHO05D008336 3.7e-38 162.2 163 52.1
CiPaw.13G058900 Carya illinoinensis HOM05D006993 ORTHO05D008336 3.7e-38 162.2 160 52.5
MD15G1141400 Malus domestica HOM05D006993 ORTHO05D008336 3.7e-38 162.2 144 56.9
Ciclev10016771m.g Citrus clementina HOM05D006993 ORTHO05D008336 4.8e-38 161.8 158 54.4
Cfa010616 Carpinus fangiana HOM05D006993 ORTHO05D008336 6.2e-38 161.4 153 53.6
PGR083G2302 Punica granatum HOM05D006993 ORTHO05D008336 6.2e-38 161.4 107 71.0
FAN08G3673 Fragaria x ananassa HOM05D006993 ORTHO05D008336 8.2e-38 161.0 164 52.4
CDE06G2320 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 1.1e-37 160.6 146 58.9
CARHR101970 Cardamine hirsuta HOM05D006993 ORTHO05D008336 1.8e-37 159.8 112 68.8
PGSC0003DMG400020288 Solanum tuberosum HOM05D006993 ORTHO05D008336 1.8e-37 159.8 104 73.1
Eucgr.H00675 Eucalyptus grandis HOM05D006993 ORTHO05D008336 2.4e-37 159.5 113 68.1
PSO541G2665 Papaver somniferum HOM05D006993 ORTHO05D008336 2.4e-37 159.5 164 53.7
Lalb_Chr17g0342261 Lupinus albus HOM05D006993 ORTHO05D008336 3.1e-37 159.1 144 54.9
SalBow6G6587 Salvia bowleyana HOM05D006993 ORTHO05D008336 3.1e-37 159.1 146 58.9
Ca_23580_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 4.0e-37 158.7 109 69.7
Peaxi162Scf12724g00016 Petunia axillaris HOM05D006993 ORTHO05D008336 6.9e-37 157.9 104 73.1
Glyma.07G059600 Glycine max HOM05D006993 ORTHO05D008336 9.0e-37 157.5 108 68.5
Sabra14G0132300 Salix brachista HOM05D006993 ORTHO05D008336 1.5e-36 156.8 166 51.8
FAN18G3928 Fragaria x ananassa HOM05D006993 ORTHO05D008336 2.6e-36 156.0 124 62.9
FAN13G2105 Fragaria x ananassa HOM05D006993 ORTHO05D008336 3.4e-36 155.6 114 65.8
Glyma.16G028500 Glycine max HOM05D006993 ORTHO05D008336 4.5e-36 155.2 108 68.5
VMungo0331G1491 Vigna mungo HOM05D006993 ORTHO05D008336 4.5e-36 155.2 109 67.9
RcHm_v2.0_Chr7g0218061 Rosa chinensis HOM05D006993 ORTHO05D008336 5.8e-36 154.8 114 64.9
FAN04G3061 Fragaria x ananassa HOM05D006993 ORTHO05D008336 1.0e-35 154.1 114 65.8
Carub.0003s2586 Capsella rubella HOM05D006993 ORTHO05D008336 1.3e-35 153.7 103 73.8
AUR62028621 Chenopodium quinoa HOM05D006993 ORTHO05D008336 2.2e-35 152.9 161 52.8
Gorai.N000700 Gossypium raimondii HOM05D006993 ORTHO05D008336 2.2e-35 152.9 126 63.5
Zm00001eb108910 Zea mays HOM05D006993 ORTHO05D008336 2.2e-35 152.9 152 52.6
SalBow2G2967 Salvia bowleyana HOM05D006993 ORTHO05D008336 3.8e-35 152.1 167 52.7
Duzib133G0497 Durio zibethinus HOM05D006993 ORTHO05D008336 8.4e-35 151.0 103 69.9
Phvul.010G110000 Phaseolus vulgaris HOM05D006993 ORTHO05D008336 1.1e-34 150.6 108 66.7
AUR62008046 Chenopodium quinoa HOM05D006993 ORTHO05D008336 3.2e-34 149.1 156 50.6
Gohir.D07G168900 Gossypium hirsutum HOM05D006993 ORTHO05D008336 3.2e-34 149.1 135 59.3
EL10Ac5g10566 Beta vulgaris HOM05D006993 ORTHO05D008336 2.1e-33 146.4 146 52.7
Ah.11g050660 Amaranthus hybridus HOM05D006993 ORTHO05D008336 7.9e-33 144.4 207 45.9
Os07g0607800 Oryza sativa ssp. japonica HOM05D006993 ORTHO05D008336 3.0e-32 142.5 104 58.7
Zm00001eb327210 Zea mays HOM05D006993 ORTHO05D008336 3.9e-32 142.1 153 47.7
arahy.Tifrunner.gnm1.ann1.6DX8AG Arachis hypogaea HOM05D006993 ORTHO05D008336 2.2e-30 136.3 85 75.3
AagrBONN_evm.TU.Sc2ySwM_344.1609 Anthoceros agrestis HOM05D006993 ORTHO05D008336 2.6e-28 129.4 113 54.0
Gohir.A07G162350 Gossypium hirsutum HOM05D006993 ORTHO05D008336 5.9e-28 128.3 113 61.1
TWI36G0749 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 7.6e-28 127.9 118 56.8
ClCG05G021810 Citrullus lanatus HOM05D006993 ORTHO05D008336 1.3e-27 127.1 152 50.0
Nitab4.5_0005967g0020 Nicotiana tabacum HOM05D006993 ORTHO05D008336 5.5e-26 121.7 167 47.3
Mapoly0043s0057 Marchantia polymorpha HOM05D006993 ORTHO05D008336 2.5e-23 112.8 108 49.1
SMO111G0038 Selaginella moellendorffii HOM05D006993 ORTHO05D008336 4.3e-23 112.1 101 49.5
Pp3c2_17900 Physcomitrium patens HOM05D006993 ORTHO05D008336 2.9e-19 99.4 110 44.5
Psat4g158880 Pisum sativum HOM05D006993 ORTHO05D008336 1.6e-17 93.6 102 51.0
Ca_23571_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 7.4e-15 84.7 58 67.2
CBR_g51823 Chara braunii HOM05D006993 ORTHO05D008336 1.8e-13 80.1 72 52.8
Gohir.D11G152300 Gossypium hirsutum HOM05D006993 ORTHO05D008336 9.4e-10 67.8 91 48.4
THA.LOC104815380 Tarenaya hassleriana HOM05D006993 ORTHO05D008336 1.3e-06 57.4 66 50.0


User provided reference genes

Program Settings