Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_736.g22953 Utricularia gibba HOM05D004876 ORTHO05D005488 1.8e-74 282.7 167 100.0
MSTRG.8381 Avicennia marina HOM05D004876 ORTHO05D005488 9.7e-44 180.6 169 69.2
Migut.F01232 Erythranthe guttata HOM05D004876 ORTHO05D005488 3.7e-43 178.7 167 56.9
Nitab4.5_0006356g0050 Nicotiana tabacum HOM05D004876 ORTHO05D005488 1.7e-40 169.9 169 66.9
Nitab4.5_0000171g0270 Nicotiana tabacum HOM05D004876 ORTHO05D005488 3.8e-40 168.7 170 66.5
Peaxi162Scf00073g02225 Petunia axillaris HOM05D004876 ORTHO05D005488 6.5e-40 167.9 169 66.3
SGA_v2.0_scaffold2G00887 Striga asiatica HOM05D004876 ORTHO05D005488 1.4e-39 166.8 169 65.7
CAN.G1229.8 Capsicum annuum HOM05D004876 ORTHO05D005488 1.8e-37 159.8 166 62.7
Cpa.g.sc128.23 Carica papaya HOM05D004876 ORTHO05D005488 1.8e-37 159.8 170 53.5
Prupe.2G265600 Prunus persica HOM05D004876 ORTHO05D005488 1.8e-37 159.8 167 53.3
SalBow7G3110 Salvia bowleyana HOM05D004876 ORTHO05D005488 2.3e-37 159.5 172 64.0
AUR62008150 Chenopodium quinoa HOM05D004876 ORTHO05D005488 8.8e-37 157.5 169 52.7
AUR62028732 Chenopodium quinoa HOM05D004876 ORTHO05D005488 8.8e-37 157.5 169 52.7
ClCG07G004830 Citrullus lanatus HOM05D004876 ORTHO05D005488 1.9e-36 156.4 170 52.4
TAR636G2293 Trochodendron aralioides HOM05D004876 ORTHO05D005488 3.3e-36 155.6 166 53.0
CsaV3_5G010740 Cucumis sativus L. HOM05D004876 ORTHO05D005488 5.7e-36 154.8 170 51.8
PGSC0003DMG400011645 Solanum tuberosum HOM05D004876 ORTHO05D005488 5.7e-36 154.8 164 66.5
EL10Ac5g10661 Beta vulgaris HOM05D004876 ORTHO05D005488 7.4e-36 154.5 169 57.4
vmacro06902 Vaccinium macrocarpon HOM05D004876 ORTHO05D005488 7.4e-36 154.5 179 57.0
Sopen05g030710 Solanum pennellii HOM05D004876 ORTHO05D005488 9.7e-36 154.1 163 66.3
TWI53G0120 Tripterygium wilfordii HOM05D004876 ORTHO05D005488 1.3e-35 153.7 175 54.9
QL08p065087 Quercus lobata HOM05D004876 ORTHO05D005488 1.7e-35 153.3 172 53.5
MELO3C020110.2 Cucumis melo HOM05D004876 ORTHO05D005488 3.7e-35 152.1 170 51.8
Lj1g0004349 Lotus japonicus HOM05D004876 ORTHO05D005488 6.3e-35 151.4 168 53.0
MD01G1169400 Malus domestica HOM05D004876 ORTHO05D005488 8.2e-35 151.0 168 50.6
THA.LOC104824370 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 8.2e-35 151.0 170 48.2
ATR0733G227 Amborella trichopoda HOM05D004876 ORTHO05D005488 1.4e-34 150.2 168 54.2
Solyc05g052180.3 Solanum lycopersicum HOM05D004876 ORTHO05D005488 1.4e-34 150.2 160 66.2
ATR1127G178 Amborella trichopoda HOM05D004876 ORTHO05D005488 1.8e-34 149.8 164 50.6
Oeu006067.1 Olea europaea HOM05D004876 ORTHO05D005488 1.8e-34 149.8 168 60.1
Migut.A00831 Erythranthe guttata HOM05D004876 ORTHO05D005488 3.1e-34 149.1 164 50.6
MBI15_g39395_MAGBIO Magnolia biondii HOM05D004876 ORTHO05D005488 3.1e-34 149.1 168 52.4
Os03g0114200 Oryza sativa ssp. japonica HOM05D004876 ORTHO05D005488 3.1e-34 149.1 167 50.3
Thecc.10G185000 Theobroma cacao HOM05D004876 ORTHO05D005488 3.1e-34 149.1 178 58.4
CSS0007534 Camellia sinensis var. sinensis HOM05D004876 ORTHO05D005488 4.1e-34 148.7 170 61.2
TPR.G13975 Trifolium pratense HOM05D004876 ORTHO05D005488 4.1e-34 148.7 166 51.2
Cc02_g05210 Coffea canephora HOM05D004876 ORTHO05D005488 5.3e-34 148.3 168 60.7
Sed0020097 Sechium edule HOM05D004876 ORTHO05D005488 5.3e-34 148.3 170 50.6
Atru.chr12.194 Acer truncatum HOM05D004876 ORTHO05D005488 6.9e-34 147.9 182 47.8
CiPaw.02G093900 Carya illinoinensis HOM05D004876 ORTHO05D005488 6.9e-34 147.9 168 50.6
HanXRQChr14g0460541 Helianthus annuus HOM05D004876 ORTHO05D005488 6.9e-34 147.9 166 63.3
TPR.G28952 Trifolium pratense HOM05D004876 ORTHO05D005488 6.9e-34 147.9 166 51.2
CiPaw.04G175400 Carya illinoinensis HOM05D004876 ORTHO05D005488 9.1e-34 147.5 172 50.6
Duzib114G0677 Durio zibethinus HOM05D004876 ORTHO05D005488 2.0e-33 146.4 173 49.7
Phvul.009G042700 Phaseolus vulgaris HOM05D004876 ORTHO05D005488 2.6e-33 146.0 166 48.8
PGR142G2846 Punica granatum HOM05D004876 ORTHO05D005488 2.6e-33 146.0 172 46.5
TWI09G0651 Tripterygium wilfordii HOM05D004876 ORTHO05D005488 2.6e-33 146.0 180 49.4
Potri.019G061200 Populus trichocarpa HOM05D004876 ORTHO05D005488 4.5e-33 145.2 172 51.2
CDE07G1038 Ceratophyllum demersum HOM05D004876 ORTHO05D005488 1.7e-32 143.3 167 53.3
Ciclev10032334m.g Citrus clementina HOM05D004876 ORTHO05D005488 2.2e-32 142.9 156 60.9
Phvul.005G185900 Phaseolus vulgaris HOM05D004876 ORTHO05D005488 2.9e-32 142.5 166 47.6
Lsat_1_v5_gn_5_104800 Lactuca sativa HOM05D004876 ORTHO05D005488 3.8e-32 142.1 165 59.4
Lalb_Chr11g0067701 Lupinus albus HOM05D004876 ORTHO05D005488 3.8e-32 142.1 172 50.0
Psat5g069360 Pisum sativum HOM05D004876 ORTHO05D005488 3.8e-32 142.1 165 51.5
Glyma.06G141500 Glycine max HOM05D004876 ORTHO05D005488 5.0e-32 141.7 166 50.6
VMungo1309G0380 Vigna mungo HOM05D004876 ORTHO05D005488 5.0e-32 141.7 166 48.8
Dinv37250 Davidia involucrata HOM05D004876 ORTHO05D005488 8.5e-32 141.0 170 58.8
PSO675G4155 Papaver somniferum HOM05D004876 ORTHO05D005488 8.5e-32 141.0 169 48.5
Rhsim03G0153600 Rhododendron simsii HOM05D004876 ORTHO05D005488 1.4e-31 140.2 179 56.4
FAN03G2458 Fragaria x ananassa HOM05D004876 ORTHO05D005488 1.9e-31 139.8 173 47.4
THA.LOC104803220 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 2.5e-31 139.4 170 54.7
Ca_29506_v3 Cicer arietinum L. HOM05D004876 ORTHO05D005488 4.2e-31 138.7 166 59.0
Manes.10G044800 Manihot esculenta HOM05D004876 ORTHO05D005488 5.5e-31 138.3 168 56.5
FAN10G2920 Fragaria x ananassa HOM05D004876 ORTHO05D005488 9.4e-31 137.5 173 46.8
FAN12G2601 Fragaria x ananassa HOM05D004876 ORTHO05D005488 9.4e-31 137.5 158 51.3
COL.COLO4_19475 Corchorus olitorius HOM05D004876 ORTHO05D005488 1.2e-30 137.1 177 57.1
ECA247G1702 Erigeron canadensis HOM05D004876 ORTHO05D008274 1.2e-30 137.1 152 59.9
Gohir.A10G177600 Gossypium hirsutum HOM05D004876 ORTHO05D005488 1.2e-30 137.1 178 55.1
Ah.11g051130 Amaranthus hybridus HOM05D004876 ORTHO05D005488 1.6e-30 136.7 159 58.5
CANSAT64G2122 Cannabis sativa HOM05D004876 ORTHO05D005488 1.6e-30 136.7 176 46.0
FvH4_7g26120 Fragaria vesca HOM05D004876 ORTHO05D005488 1.6e-30 136.7 173 46.2
Gohir.D10G184200 Gossypium hirsutum HOM05D004876 ORTHO05D005488 1.6e-30 136.7 178 55.1
Gorai.011G206400 Gossypium raimondii HOM05D004876 ORTHO05D005488 1.6e-30 136.7 178 55.1
Carub.0004s2308 Capsella rubella HOM05D004876 ORTHO05D005488 2.1e-30 136.3 172 47.1
CANSAT64G1352 Cannabis sativa HOM05D004876 ORTHO05D005488 4.7e-30 135.2 176 45.5
Haze_17370 Corylus avellana HOM05D004876 ORTHO05D005488 7.9e-30 134.4 168 56.5
AL4G38670 Arabidopsis lyrata HOM05D004876 ORTHO05D005488 1.0e-29 134.0 171 48.0
PSO170G6098 Papaver somniferum HOM05D004876 ORTHO05D005488 1.4e-29 133.7 173 47.4
PGR142G0395 Punica granatum HOM05D004876 ORTHO05D005488 1.4e-29 133.7 163 55.8
BolC4t28355H Brassica oleracea HOM05D004876 ORTHO05D005488 2.3e-29 132.9 169 45.6
Zm00001eb000910 Zea mays HOM05D004876 ORTHO05D005488 2.3e-29 132.9 173 48.0
AL4G34450 Arabidopsis lyrata HOM05D004876 ORTHO05D005488 5.1e-29 131.7 172 45.3
AT2G40780 Arabidopsis thaliana HOM05D004876 ORTHO05D005488 8.8e-29 131.0 169 45.6
A04p31160 Brassica napus HOM05D004876 ORTHO05D005488 1.1e-28 130.6 169 45.0
C04p68560 Brassica napus HOM05D004876 ORTHO05D005488 1.1e-28 130.6 169 45.0
HPP92_015433 Vanilla planifolia HOM05D004876 ORTHO05D005488 1.1e-28 130.6 161 45.3
Ca_16858_v3 Cicer arietinum L. HOM05D004876 ORTHO05D005488 2.0e-28 129.8 183 54.1
RcHm_v2.0_Chr1g0372561 Rosa chinensis HOM05D004876 ORTHO05D005488 2.0e-28 129.8 158 49.4
BraA04t18571Z Brassica rapa HOM05D004876 ORTHO05D005488 2.6e-28 129.4 169 44.4
Sp4g23100 Schrenkiella parvula HOM05D004876 ORTHO05D005488 3.3e-28 129.0 171 45.0
GSVIVG01038577001 Vitis vinifera HOM05D004876 ORTHO05D005488 5.7e-28 128.3 130 65.4
Nitab4.5_0008902g0030 Nicotiana tabacum HOM05D004876 ORTHO05D005488 7.4e-28 127.9 167 58.1
BcaB06g29175 Brassica carinata HOM05D004876 ORTHO05D005488 9.7e-28 127.5 172 43.6
FAN06G0183 Fragaria x ananassa HOM05D004876 ORTHO05D005488 2.2e-27 126.3 178 44.9
FvH4_4g04970 Fragaria vesca HOM05D004876 ORTHO05D005488 2.8e-27 125.9 177 45.8
Lsat_1_v5_gn_2_126741 Lactuca sativa HOM05D004876 ORTHO05D005488 2.8e-27 125.9 166 56.6
Sc10g0003050 Simmondsia chinensis HOM05D004876 ORTHO05D005488 3.7e-27 125.6 109 59.6
Aa31LG3G1350 Aethionema arabicum HOM05D004876 ORTHO05D005488 4.8e-27 125.2 173 44.5
Aqoxy6G02070 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 4.8e-27 125.2 168 45.8
CARHR135880 Cardamine hirsuta HOM05D004876 ORTHO05D005488 4.8e-27 125.2 175 44.0
Duzib106G1237 Durio zibethinus HOM05D004876 ORTHO05D005488 8.2e-27 124.4 174 55.7
Dinv21858 Davidia involucrata HOM05D004876 ORTHO05D005488 1.8e-26 123.2 106 73.6
Peaxi162Scf00167g01129 Petunia axillaris HOM05D004876 ORTHO05D005488 1.8e-26 123.2 127 54.3
Thhalv10017311m.g Eutrema salsugineum HOM05D004876 ORTHO05D005488 5.3e-26 121.7 169 44.4
THA.LOC104808402 Tarenaya hassleriana HOM05D004876 ORTHO05D005488 1.2e-25 120.6 120 51.7
Ca_29868_v3 Cicer arietinum L. HOM05D000260 ORTHO05D000318 2.0e-25 119.8 106 58.5
SEGI_18121 Sequoiadendron giganteum HOM05D004876 ORTHO05D005488 2.6e-25 119.4 174 44.3
Aqoxy2G01672 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 3.4e-25 119.0 153 46.4
Lj6g0009237 Lotus japonicus HOM05D004876 ORTHO05D005488 5.9e-25 118.2 168 54.2
Medtr3g093790 Medicago truncatula HOM05D004876 ORTHO05D005488 7.7e-25 117.9 151 55.6
arahy.Tifrunner.gnm1.ann1.58ULDB Arachis hypogaea HOM05D004876 ORTHO05D005488 1.0e-24 117.5 179 49.7
Pp3c16_8280 Physcomitrium patens HOM05D004876 ORTHO05D005488 2.9e-24 115.9 182 40.1
Sopen03g025590 Solanum pennellii HOM05D004876 ORTHO05D005488 5.0e-24 115.2 106 71.7
Sabra19G0074800 Salix brachista HOM05D004876 ORTHO05D005488 1.1e-23 114.0 112 56.2
Lj8A52T23 Lonicera japonica HOM05D004876 ORTHO05D005488 5.5e-23 111.7 106 54.7
FAN17G0734 Fragaria x ananassa HOM05D004876 ORTHO05D005488 7.2e-23 111.3 240 35.4
PGSC0003DMG400020604 Solanum tuberosum HOM05D004876 ORTHO05D005488 9.4e-23 110.9 106 69.8
Eucgr.G03147 Eucalyptus grandis HOM05D004876 ORTHO05D005488 1.6e-22 110.2 171 49.1
Mapoly0014s0200 Marchantia polymorpha HOM05D004876 ORTHO05D005488 1.6e-22 110.2 176 39.8
Aqoxy5G02193 Aquilegia oxysepala HOM05D004876 ORTHO05D005488 2.1e-22 109.8 130 46.2
Rhsim04G0113200 Rhododendron simsii HOM05D004876 ORTHO05D005488 8.0e-22 107.8 179 41.9
BcaB05g22749 Brassica carinata HOM05D004876 ORTHO05D005488 1.0e-21 107.5 117 49.6
CiPaw.04G175300 Carya illinoinensis HOM05D004876 ORTHO05D005488 1.0e-21 107.5 103 55.3
BcaB01g03515 Brassica carinata HOM05D004876 ORTHO05D005488 3.9e-21 105.5 168 44.0
BcaC02g12879 Brassica carinata HOM05D004876 ORTHO05D005488 8.8e-21 104.4 118 47.5
Nn2g10267 Nelumbo nucifera HOM05D004876 ORTHO05D005488 6.3e-19 98.2 101 50.5
Actinidia13638 Actinidia chinensis HOM05D004876 ORTHO05D005488 1.4e-18 97.1 132 45.5
Nn1g06656 Nelumbo nucifera HOM05D004876 ORTHO05D005488 1.6e-17 93.6 117 50.4
HanXRQChr07g0204961 Helianthus annuus HOM05D004876 ORTHO05D005488 4.2e-15 85.5 109 45.9
AagrBONN_evm.TU.Sc2ySwM_368.2679 Anthoceros agrestis HOM05D004876 ORTHO05D005488 4.7e-14 82.0 169 33.7
TPR.G24790 Trifolium pratense HOM05D004876 ORTHO05D005488 4.4e-12 75.5 75 53.3
C03p81600 Brassica napus HOM05D004876 ORTHO05D005488 1.7e-08 63.5 103 39.8
BolC3t20430H Brassica oleracea HOM05D004876 ORTHO05D005488 1.7e-08 63.5 103 39.8
C01p26050 Brassica napus HOM05D004876 ORTHO05D005488 6.5e-08 61.6 97 40.2
Cre03.g155800 Chlamydomonas reinhardtii HOM05D004876 ORTHO05D005488 5.5e-07 58.5 111 29.7
Oeu039385.1 Olea europaea HOM05D002276 ORTHO05D002381 4.7e-06 55.5 66 71.2


User provided reference genes

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