Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_736.g22803 Utricularia gibba HOM05D005915 ORTHO05D007239 1.7e-102 376.3 232 100.0
Migut.D01097 Erythranthe guttata HOM05D005915 ORTHO05D007239 3.8e-46 189.1 149 71.8
SGA_v2.0_scaffold89G27484 Striga asiatica HOM05D005915 ORTHO05D007239 5.3e-40 168.7 183 59.0
Oeu033656.3 Olea europaea HOM05D005915 ORTHO05D007239 2.6e-39 166.4 181 59.1
MSTRG.4689 Avicennia marina HOM05D005915 ORTHO05D007239 1.2e-36 157.5 177 56.5
SalBow6G5910 Salvia bowleyana HOM05D005915 ORTHO05D007239 5.1e-35 152.1 254 45.3
Actinidia25458 Actinidia chinensis HOM05D005915 ORTHO05D007239 1.3e-33 147.5 167 56.3
Dinv23302 Davidia involucrata HOM05D005915 ORTHO05D007239 2.4e-32 143.3 175 52.0
Nitab4.5_0001454g0070 Nicotiana tabacum HOM05D005915 ORTHO05D007239 7.6e-31 138.3 168 55.4
Nitab4.5_0009423g0020 Nicotiana tabacum HOM05D005915 ORTHO05D007239 7.6e-31 138.3 168 54.2
Manes.11G064500 Manihot esculenta HOM05D005915 ORTHO05D007239 4.9e-30 135.6 176 50.0
Solyc03g117090.3 Solanum lycopersicum HOM05D005915 ORTHO05D007239 4.9e-30 135.6 164 54.3
Sopen03g036000 Solanum pennellii HOM05D005915 ORTHO05D007239 4.9e-30 135.6 164 54.3
PGSC0003DMG400014193 Solanum tuberosum HOM05D005915 ORTHO05D007239 4.9e-30 135.6 158 54.4
SHI11251 Sapria himalayana HOM05D005915 ORTHO05D007239 1.1e-29 134.4 129 58.9
TWI18G1314 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 1.4e-29 134.0 172 53.5
Oeu008050.2 Olea europaea HOM05D005915 ORTHO05D007239 2.5e-29 133.3 147 57.1
Rhsim08G0207800 Rhododendron simsii HOM05D005915 ORTHO05D007239 5.5e-29 132.1 193 49.7
ClCG07G012140 Citrullus lanatus HOM05D005915 ORTHO05D007239 1.2e-28 131.0 158 52.5
ECA232G2243 Erigeron canadensis HOM05D005915 ORTHO05D007239 1.2e-28 131.0 126 59.5
CANSAT56G1340 Cannabis sativa HOM05D005915 ORTHO05D007239 1.3e-27 127.5 179 46.9
Lsat_1_v5_gn_4_85741 Lactuca sativa HOM05D005915 ORTHO05D007239 1.3e-27 127.5 132 60.6
EL10As5g23598 Beta vulgaris HOM05D005915 ORTHO05D007239 2.3e-27 126.7 125 57.6
MELO3C017835.2 Cucumis melo HOM05D005915 ORTHO05D007239 2.3e-27 126.7 156 51.3
MD17G1221100 Malus domestica HOM05D005915 ORTHO05D007239 1.9e-26 123.6 183 47.5
vmacro19042 Vaccinium macrocarpon HOM05D005915 ORTHO05D007239 1.9e-26 123.6 148 55.4
HanXRQChr04g0107231 Helianthus annuus HOM05D005915 ORTHO05D007239 2.5e-26 123.2 124 57.3
Atru.chr6.915 Acer truncatum HOM05D005915 ORTHO05D007239 4.3e-26 122.5 163 48.5
COL.COLO4_26669 Corchorus olitorius HOM05D005915 ORTHO05D007239 5.7e-26 122.1 187 44.9
arahy.Tifrunner.gnm1.ann1.DN9Y4W Arachis hypogaea HOM05D005915 ORTHO05D007239 7.4e-26 121.7 180 46.1
arahy.Tifrunner.gnm1.ann1.2L8LZM Arachis hypogaea HOM05D005915 ORTHO05D007239 1.6e-25 120.6 180 46.1
CsaV3_4G002020 Cucumis sativus L. HOM05D005915 ORTHO05D007239 2.2e-25 120.2 156 49.4
Prupe.7G069400 Prunus persica HOM05D005915 ORTHO05D007239 4.8e-25 119.0 171 48.5
PGR142G0337 Punica granatum HOM05D005915 ORTHO05D007239 8.2e-25 118.2 159 49.1
THA.LOC104812439 Tarenaya hassleriana HOM05D005915 ORTHO05D007239 1.4e-24 117.5 152 51.3
QL02p069532 Quercus lobata HOM05D005915 ORTHO05D007239 1.8e-24 117.1 181 43.1
TAR633G0597 Trochodendron aralioides HOM05D005915 ORTHO05D007239 4.1e-24 115.9 186 43.5
Gohir.A09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 6.9e-24 115.2 179 45.3
Sed0026009 Sechium edule HOM05D005915 ORTHO05D007239 6.9e-24 115.2 178 44.4
FvH4_5g29190 Fragaria vesca HOM05D005915 ORTHO05D007239 1.2e-23 114.4 138 50.7
PSO063G1890 Papaver somniferum HOM05D005915 ORTHO05D007239 2.0e-23 113.6 135 51.1
TWI12G0041 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 5.9e-23 112.1 138 52.9
Gorai.006G107100 Gossypium raimondii HOM05D005915 ORTHO05D007239 1.0e-22 111.3 130 52.3
CiPaw.01G253100 Carya illinoinensis HOM05D005915 ORTHO05D007239 1.3e-22 110.9 161 49.7
Potri.003G180500 Populus trichocarpa HOM05D005915 ORTHO05D007239 1.3e-22 110.9 166 47.6
Ah.05g171200 Amaranthus hybridus HOM05D005915 ORTHO05D007239 2.9e-22 109.8 147 51.7
BolC6t38110H Brassica oleracea HOM05D005915 ORTHO05D007239 3.8e-22 109.4 182 41.2
Sabra01G0033000 Salix brachista HOM05D005915 ORTHO05D007239 3.8e-22 109.4 184 46.2
Thecc.06G038900 Theobroma cacao HOM05D005915 ORTHO05D007239 3.8e-22 109.4 80 68.8
CSS0040460 Camellia sinensis var. sinensis HOM05D005915 ORTHO05D007239 5.0e-22 109.0 160 46.9
PSO782G5373 Papaver somniferum HOM05D005915 ORTHO05D007239 5.0e-22 109.0 158 45.6
A07p26820 Brassica napus HOM05D005915 ORTHO05D007239 6.5e-22 108.6 177 41.2
C06p29450 Brassica napus HOM05D005915 ORTHO05D007239 6.5e-22 108.6 182 41.2
Eucgr.J03100 Eucalyptus grandis HOM05D005915 ORTHO05D007239 6.5e-22 108.6 157 49.0
Gohir.D09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 8.5e-22 108.2 159 45.9
Ciclev10026473m.g Citrus clementina HOM05D005915 ORTHO05D007239 1.1e-21 107.8 179 43.6
Carub.0002s2685 Capsella rubella HOM05D005915 ORTHO05D007239 1.4e-21 107.5 154 44.8
Duzib235G0368 Durio zibethinus HOM05D005915 ORTHO05D007239 1.4e-21 107.5 196 40.8
HPP92_016367 Vanilla planifolia HOM05D005915 ORTHO05D007239 1.4e-21 107.5 164 45.7
AT1G80700 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 2.5e-21 106.7 158 43.7
BolC6t40396H Brassica oleracea HOM05D005915 ORTHO05D007239 2.5e-21 106.7 157 43.3
BcaC08g45335 Brassica carinata HOM05D005915 ORTHO05D007239 3.2e-21 106.3 166 42.8
Sc12g0008470 Simmondsia chinensis HOM05D005915 ORTHO05D007239 3.2e-21 106.3 173 42.8
C06p53780 Brassica napus HOM05D005915 ORTHO05D007239 4.2e-21 105.9 158 43.7
BraA07t30325Z Brassica rapa HOM05D005915 ORTHO05D007239 4.2e-21 105.9 182 42.3
A07p44990 Brassica napus HOM05D005915 ORTHO05D007239 7.2e-21 105.1 158 43.7
Ca_20554_v3 Cicer arietinum L. HOM05D005915 ORTHO05D007239 7.2e-21 105.1 183 42.6
Aqoxy7G03485 Aquilegia oxysepala HOM05D005915 ORTHO05D007239 1.2e-20 104.4 145 44.8
BcaC08g47553 Brassica carinata HOM05D005915 ORTHO05D007239 1.2e-20 104.4 155 45.2
BraA07t32004Z Brassica rapa HOM05D005915 ORTHO05D007239 1.2e-20 104.4 159 43.4
PGR102G1994 Punica granatum HOM05D005915 ORTHO05D007239 1.6e-20 104.0 173 44.5
VMungo0331G1031 Vigna mungo HOM05D005915 ORTHO05D007239 1.6e-20 104.0 166 44.6
Aa31LG4G980 Aethionema arabicum HOM05D005915 ORTHO05D007239 2.1e-20 103.6 163 41.7
Sp5g35050 Schrenkiella parvula HOM05D005915 ORTHO05D007239 2.1e-20 103.6 182 40.7
Hund00452 Selenicereus undatus HOM05D005915 ORTHO05D007239 6.1e-20 102.1 159 44.0
Phvul.010G159800 Phaseolus vulgaris HOM05D005915 ORTHO05D007239 1.0e-19 101.3 176 42.0
Cc04_g04930 Coffea canephora HOM05D005915 ORTHO05D007239 1.4e-19 100.9 132 55.3
Nn2g12284 Nelumbo nucifera HOM05D005915 ORTHO05D007239 1.8e-19 100.5 235 39.1
AUR62022762 Chenopodium quinoa HOM05D005915 ORTHO05D007239 2.3e-19 100.1 159 45.3
AT1G80980 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 3.0e-19 99.8 154 42.9
TPR.G17738 Trifolium pratense HOM05D005915 ORTHO05D007239 3.0e-19 99.8 171 42.1
AUR62027568 Chenopodium quinoa HOM05D005915 ORTHO05D007239 5.1e-19 99.0 142 46.5
Lj3g0003301 Lotus japonicus HOM05D005915 ORTHO05D007239 6.7e-19 98.6 174 41.4
TPR.G38763 Trifolium pratense HOM05D005915 ORTHO05D007239 6.7e-19 98.6 180 41.1
BcaB02g07251 Brassica carinata HOM05D005915 ORTHO05D007239 1.1e-18 97.8 181 42.0
RcHm_v2.0_Chr7g0221831 Rosa chinensis HOM05D005915 ORTHO05D007239 1.1e-18 97.8 141 48.2
AL2G40740 Arabidopsis lyrata HOM05D005915 ORTHO05D007239 1.5e-18 97.4 157 41.4
Psat7g259880 Pisum sativum HOM05D005915 ORTHO05D007239 1.5e-18 97.4 136 48.5
HanXRQChr09g0274531 Helianthus annuus HOM05D005915 ORTHO05D007239 2.5e-18 96.7 72 72.2
Potri.001G047700 Populus trichocarpa HOM05D005915 ORTHO05D007239 4.3e-18 95.9 182 42.9
Thhalv10019105m.g Eutrema salsugineum HOM05D005915 ORTHO05D007239 7.4e-18 95.1 170 41.2
Medtr8g060830 Medicago truncatula HOM05D005915 ORTHO05D007239 7.4e-18 95.1 168 44.0
PSO339G3366 Papaver somniferum HOM05D005915 ORTHO05D007239 1.3e-17 94.4 123 48.8
Peaxi162Scf00332g00322 Petunia axillaris HOM05D005915 ORTHO05D007239 6.3e-17 92.0 168 42.9
Medtr4g006550 Medicago truncatula HOM05D005915 ORTHO05D007239 8.2e-17 91.7 168 42.9
Glyma.08G216900 Glycine max HOM05D005915 ORTHO05D007239 1.8e-16 90.5 169 40.8
ATR1120G130 Amborella trichopoda HOM05D005915 ORTHO05D007239 2.4e-16 90.1 131 47.3
Nitab4.5_0004330g0010 Nicotiana tabacum HOM05D005915 ORTHO05D007239 4.1e-16 89.4 110 50.0
CDE05G3202 Ceratophyllum demersum HOM05D005915 ORTHO05D007239 9.1e-16 88.2 96 58.3
SEGI_14387 Sequoiadendron giganteum HOM05D005915 ORTHO05D007239 1.7e-14 84.0 190 35.8
Zm00001eb174980 Zea mays HOM05D005915 ORTHO05D007239 3.8e-14 82.8 183 38.8
GSVIVG01017559001 Vitis vinifera HOM05D005915 ORTHO05D007239 3.2e-13 79.7 138 41.3
Lalb_Chr01g0012181 Lupinus albus HOM05D005915 ORTHO05D007239 5.5e-13 79.0 159 37.7
Cpa.g.sc0.147 Carica papaya HOM05D005915 ORTHO05D007239 9.4e-13 78.2 123 48.0
FAN18G1559 Fragaria x ananassa HOM05D005915 ORTHO05D007239 3.6e-12 76.3 138 42.0
Os08g0278100 Oryza sativa ssp. japonica HOM05D005915 ORTHO05D007239 4.7e-12 75.9 184 35.9
Prupe.1G199000 Prunus persica HOM05D005915 ORTHO05D007239 3.0e-11 73.2 109 51.4
Mapoly0140s0034 Marchantia polymorpha HOM05D005915 ORTHO05D007239 2.6e-10 70.1 95 47.4
FAN08G0623 Fragaria x ananassa HOM05D005915 ORTHO05D007239 9.7e-10 68.2 197 33.5
Glyma.07G025532 Glycine max HOM05D005915 ORTHO05D007239 2.2e-09 67.0 48 64.6
BolC3t13327H Brassica oleracea HOM05D005915 ORTHO05D007239 2.8e-09 66.6 93 47.3
Pp3c9_20610 Physcomitrium patens HOM05D005915 ORTHO05D007239 8.2e-09 65.1 167 40.1
Dinv21397 Davidia involucrata HOM05D005915 ORTHO05D007239 1.4e-08 64.3 161 34.2
QL05p035112 Quercus lobata HOM05D005915 ORTHO05D007239 1.0e-06 58.2 34 79.4


User provided reference genes

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