Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_736.g22755 Utricularia gibba HOM05D006774 ORTHO05D008411 1.9e-231 805.4 398 100.0
MSTRG.20428 Avicennia marina HOM05D006774 ORTHO05D008411 1.5e-106 390.6 448 46.7
Migut.N02011 Erythranthe guttata HOM05D006774 ORTHO05D008411 1.1e-96 357.8 437 44.6
Sopen01g042680 Solanum pennellii HOM05D006774 ORTHO05D008411 3.2e-85 319.7 482 37.6
PGSC0003DMG400024686 Solanum tuberosum HOM05D006774 ORTHO05D008411 3.2e-85 319.7 441 39.2
CAN.G1034.42 Capsicum annuum HOM05D006774 ORTHO05D008411 9.2e-85 318.2 442 39.1
CSS0019331 Camellia sinensis var. sinensis HOM05D006774 ORTHO05D008411 2.3e-83 313.5 390 43.1
TAR633G1323 Trochodendron aralioides HOM05D006774 ORTHO05D008411 9.6e-82 308.1 458 38.9
Cc02_g33360 Coffea canephora HOM05D006774 ORTHO05D008411 5.2e-80 302.4 429 40.8
Aqoxy5G00494 Aquilegia oxysepala HOM05D006774 ORTHO05D008411 5.8e-79 298.9 476 36.3
Dinv40294 Davidia involucrata HOM05D006774 ORTHO05D008411 9.9e-79 298.1 266 53.8
CSS0040526 Camellia sinensis var. sinensis HOM05D006774 ORTHO05D008411 4.2e-77 292.7 369 42.3
Nn1g02268 Nelumbo nucifera HOM05D006774 ORTHO05D008411 1.5e-74 284.3 397 39.5
EL10Ac4g09357 Beta vulgaris HOM05D006774 ORTHO05D008411 7.3e-74 282.0 447 36.5
MD12G1218600 Malus domestica HOM05D006774 ORTHO05D008411 9.6e-74 281.6 442 38.2
RhsimUnG0226700 Rhododendron simsii HOM05D006774 ORTHO05D008411 8.1e-73 278.5 354 41.8
PSO782G5565 Papaver somniferum HOM05D006774 ORTHO05D008411 1.1e-72 278.1 390 39.0
PSO478G4979 Papaver somniferum HOM05D006774 ORTHO05D008411 3.1e-72 276.6 448 35.9
Lj9C82T10 Lonicera japonica HOM05D006774 ORTHO05D008411 5.3e-72 275.8 344 44.8
vmacro05013 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 5.3e-72 275.8 344 43.0
vmacro23279 Vaccinium macrocarpon HOM05D006774 ORTHO05D008411 5.3e-72 275.8 344 43.0
Lj9C83T13 Lonicera japonica HOM05D006774 ORTHO05D008411 1.2e-71 274.6 357 43.1
CiPaw.10G139100 Carya illinoinensis HOM05D006774 ORTHO05D008411 1.3e-70 271.2 468 35.0
Gohir.A13G107700 Gossypium hirsutum HOM05D006774 ORTHO05D008411 1.3e-70 271.2 449 35.2
TWI56G0431 Tripterygium wilfordii HOM05D006774 ORTHO05D008411 2.2e-70 270.4 481 35.1
Lsat_1_v5_gn_9_86761 Lactuca sativa HOM05D006774 ORTHO05D008411 3.8e-70 269.6 442 37.8
Lj9C84T1 Lonicera japonica HOM05D006774 ORTHO05D008411 8.4e-70 268.5 330 44.5
MD04G1204900 Malus domestica HOM05D006774 ORTHO05D008411 8.4e-70 268.5 435 37.2
QL03p007112 Quercus lobata HOM05D006774 ORTHO05D008411 1.9e-69 267.3 451 34.6
Glyma.03G237400 Glycine max HOM05D006774 ORTHO05D008411 5.4e-69 265.8 464 36.2
CANSAT54G0432 Cannabis sativa HOM05D006774 ORTHO05D008411 9.3e-69 265.0 396 36.4
Ah.06g189400 Amaranthus hybridus HOM05D006774 ORTHO05D008411 1.2e-68 264.6 435 37.2
Hund07075 Selenicereus undatus HOM05D006774 ORTHO05D008411 2.7e-68 263.5 435 37.5
HanXRQChr11g0338551 Helianthus annuus HOM05D006774 ORTHO05D008411 6.0e-68 262.3 430 37.4
TWI12G1162 Tripterygium wilfordii HOM05D006774 ORTHO05D008411 7.9e-68 261.9 398 37.4
FAN09G1854 Fragaria x ananassa HOM05D006774 ORTHO05D008411 1.7e-67 260.8 409 37.7
Glyma.19G235000 Glycine max HOM05D006774 ORTHO05D008411 1.7e-67 260.8 426 36.4
Prupe.6G324900 Prunus persica HOM05D006774 ORTHO05D008411 1.7e-67 260.8 425 37.6
THA.LOC104805877 Tarenaya hassleriana HOM05D006774 ORTHO05D008411 3.9e-67 259.6 486 34.0
Eucgr.C01256 Eucalyptus grandis HOM05D006774 ORTHO05D008411 1.1e-66 258.1 435 36.8
Carub.0002s0819 Capsella rubella HOM05D006774 ORTHO05D008411 1.5e-66 257.7 455 35.2
BcaC09g49602 Brassica carinata HOM05D006774 ORTHO05D008411 1.9e-66 257.3 438 34.9
Thecc.05G302500 Theobroma cacao HOM05D006774 ORTHO05D008411 2.5e-66 256.9 370 38.9
Atru.chr2.394 Acer truncatum HOM05D006774 ORTHO05D008411 3.3e-66 256.5 464 35.1
FAN02G0725 Fragaria x ananassa HOM05D006774 ORTHO05D008411 3.3e-66 256.5 428 36.4
C01p34610 Brassica napus HOM05D006774 ORTHO05D008411 4.3e-66 256.1 438 34.9
BolC1t03432H Brassica oleracea HOM05D006774 ORTHO05D008411 4.3e-66 256.1 438 34.9
Thhalv10023440m.g Eutrema salsugineum HOM05D006774 ORTHO05D008411 4.3e-66 256.1 467 34.9
Ca_05814_v3 Cicer arietinum L. HOM05D006774 ORTHO05D008411 7.3e-66 255.4 421 37.3
PGR031G3046 Punica granatum HOM05D006774 ORTHO05D008411 1.3e-65 254.6 484 33.3
AL1G65540 Arabidopsis lyrata HOM05D006774 ORTHO05D008411 1.6e-65 254.2 463 35.2
BcaB04g20150 Brassica carinata HOM05D006774 ORTHO05D008411 1.6e-65 254.2 397 37.8
Cfa006593 Carpinus fangiana HOM05D006774 ORTHO05D008411 1.6e-65 254.2 358 38.8
Sed0009699 Sechium edule HOM05D006774 ORTHO05D008411 1.6e-65 254.2 426 35.4
FvH4_6g06010 Fragaria vesca HOM05D006774 ORTHO05D008411 2.1e-65 253.8 417 36.2
Aa31LG2G11700 Aethionema arabicum HOM05D006774 ORTHO05D008411 3.6e-65 253.1 413 35.6
Duzib128G0809 Durio zibethinus HOM05D006774 ORTHO05D008411 8.1e-65 251.9 391 38.6
FAN05G0244 Fragaria x ananassa HOM05D006774 ORTHO05D008411 8.1e-65 251.9 397 37.8
arahy.Tifrunner.gnm1.ann1.ST8CS6 Arachis hypogaea HOM05D006774 ORTHO05D008411 1.1e-64 251.5 428 35.3
Potri.013G021500 Populus trichocarpa HOM05D006774 ORTHO05D008411 1.1e-64 251.5 445 36.0
Sc09g0003160 Simmondsia chinensis HOM05D006774 ORTHO05D008411 1.1e-64 251.5 439 35.5
FAN05G2700 Fragaria x ananassa HOM05D006774 ORTHO05D008411 1.4e-64 251.1 372 38.4
Lalb_Chr18g0045661 Lupinus albus HOM05D006774 ORTHO05D008411 1.4e-64 251.1 433 35.1
arahy.Tifrunner.gnm1.ann1.V1E923 Arachis hypogaea HOM05D006774 ORTHO05D008411 1.8e-64 250.8 419 36.0
BraA01t02861Z Brassica rapa HOM05D006774 ORTHO05D008411 2.4e-64 250.4 427 35.1
Haze_04191 Corylus avellana HOM05D006774 ORTHO05D008411 2.4e-64 250.4 365 38.1
Duzib177G0798 Durio zibethinus HOM05D006774 ORTHO05D008411 2.4e-64 250.4 430 36.7
Gorai.013G124300 Gossypium raimondii HOM05D006774 ORTHO05D008411 2.4e-64 250.4 448 34.2
SpUn0004_0080 Schrenkiella parvula HOM05D006774 ORTHO05D008411 2.4e-64 250.4 425 36.7
SpUn0066_0030 Schrenkiella parvula HOM05D006774 ORTHO05D008411 2.4e-64 250.4 425 36.7
VMungo0540G2441 Vigna mungo HOM05D006774 ORTHO05D008411 3.1e-64 250.0 380 38.2
Cpa.g.sc48.60 Carica papaya HOM05D006774 ORTHO05D008411 4.0e-64 249.6 446 34.3
ClCG03G016980 Citrullus lanatus HOM05D006774 ORTHO05D008411 4.0e-64 249.6 424 35.1
ATR0332G083 Amborella trichopoda HOM05D006774 ORTHO05D008411 5.3e-64 249.2 466 34.5
RcHm_v2.0_Chr3g0454971 Rosa chinensis HOM05D006774 ORTHO05D008411 6.9e-64 248.8 391 37.9
A01p27210 Brassica napus HOM05D006774 ORTHO05D008411 1.5e-63 247.7 427 34.9
CARHR284430 Cardamine hirsuta HOM05D006774 ORTHO05D008411 1.5e-63 247.7 421 35.9
COL.COLO4_13460 Corchorus olitorius HOM05D006774 ORTHO05D008411 3.4e-63 246.5 345 38.8
AT1G54990 Arabidopsis thaliana HOM05D006774 ORTHO05D008411 4.5e-63 246.1 405 36.0
CsaV3_1G038960 Cucumis sativus L. HOM05D006774 ORTHO05D008411 1.3e-62 244.6 417 34.8
MBI04_g29615_MAGBIO Magnolia biondii HOM05D006774 ORTHO05D008411 2.9e-62 243.4 440 33.0
Phvul.006G091800 Phaseolus vulgaris HOM05D006774 ORTHO05D008411 2.4e-61 240.4 383 37.9
Ciclev10001021m.g Citrus clementina HOM05D006774 ORTHO05D008411 5.5e-61 239.2 412 37.4
Medtr7g113420 Medicago truncatula HOM05D006774 ORTHO05D008411 6.0e-60 235.7 419 35.6
MELO3C015322.2 Cucumis melo HOM05D006774 ORTHO05D008411 3.3e-58 229.9 481 32.4
Manes.09G167600 Manihot esculenta HOM05D006774 ORTHO05D008411 5.6e-58 229.2 357 39.2
CDE05G2690 Ceratophyllum demersum HOM05D006774 ORTHO05D008411 8.1e-57 225.3 416 32.0
Lj1g0013332 Lotus japonicus HOM05D006774 ORTHO05D008411 6.9e-56 222.2 412 32.8
Sabra13G0023900 Salix brachista HOM05D006774 ORTHO05D008411 6.9e-56 222.2 351 37.9
AUR62000820 Chenopodium quinoa HOM05D006774 ORTHO05D008411 1.9e-53 214.2 317 35.0
Psat0s3041g0040 Pisum sativum HOM05D006774 ORTHO05D008411 6.7e-51 205.7 264 42.4
GSVIVG01000080001 Vitis vinifera HOM05D006774 ORTHO05D008411 3.3e-50 203.4 353 36.8
ECA236G1211 Erigeron canadensis HOM05D000208 ORTHO05D000130 2.5e-42 177.2 339 34.2
PSO478G2742 Papaver somniferum HOM05D006774 ORTHO05D008411 1.3e-41 174.9 285 36.1
TPR.G33221 Trifolium pratense HOM05D006774 ORTHO05D008411 2.4e-40 170.6 313 33.5
Gohir.D13G110900 Gossypium hirsutum HOM05D006774 ORTHO05D008411 1.2e-39 168.3 344 33.1
AUR62005151 Chenopodium quinoa HOM05D006774 ORTHO05D008411 2.1e-36 157.5 162 46.3
Atru.chr12.689 Acer truncatum HOM05D006774 ORTHO05D008411 1.1e-32 145.2 194 40.7
Peaxi162Scf00037g00517 Petunia axillaris HOM05D006774 ORTHO05D008411 2.4e-32 144.1 400 27.5
Solyc01g099120.4 Solanum lycopersicum HOM05D006774 ORTHO05D008411 1.5e-31 141.4 179 40.8
Nitab4.5_0000137g0150 Nicotiana tabacum HOM05D006774 ORTHO05D008411 2.0e-31 141.0 135 48.1
PSO782G1046 Papaver somniferum HOM05D006774 ORTHO05D008411 1.3e-30 138.3 244 36.9
Nitab4.5_0005541g0040 Nicotiana tabacum HOM05D006774 ORTHO05D008411 6.5e-30 136.0 173 41.6
Os11g0544100 Oryza sativa ssp. japonica HOM05D006774 ORTHO05D008411 4.7e-28 129.8 412 26.2
Zm00001eb197590 Zea mays HOM05D006774 ORTHO05D008411 2.6e-26 124.0 365 26.8
Pp3c11_22860 Physcomitrium patens HOM05D006774 ORTHO05D008411 4.4e-26 123.2 274 29.9
Actinidia05698 Actinidia chinensis HOM05D006774 ORTHO05D008411 5.0e-22 109.8 187 35.8
SMO145G0196 Selaginella moellendorffii HOM05D006774 ORTHO05D008411 1.5e-18 98.2 264 29.2
Oeu035485.2 Olea europaea HOM05D006774 ORTHO05D001341 7.0e-16 89.4 165 36.4


User provided reference genes

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