Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_736.g22563 Utricularia gibba HOM05D004236 ORTHO05D004903 4.5e-94 347.8 163 100.0
unitig_899.g14517 Utricularia gibba HOM05D004236 ORTHO05D004903 1.8e-10 70.1 48 72.9
Actinidia17648 Actinidia chinensis HOM05D004236 ORTHO05D004903 8.9e-10 67.8 48 68.8
Cc07_g08360 Coffea canephora HOM05D004236 ORTHO05D004903 2.0e-09 66.6 48 66.7
Dinv33978 Davidia involucrata HOM05D004236 ORTHO05D004903 2.0e-09 66.6 48 66.7
CSS0029696 Camellia sinensis var. sinensis HOM05D004236 ORTHO05D004903 3.4e-09 65.9 48 66.7
Hma1.2p1_0500F.1_g166960 Hydrangea macrophylla HOM05D004236 ORTHO05D004903 3.4e-09 65.9 48 66.7
Rhsim10G0077900 Rhododendron simsii HOM05D004236 ORTHO05D004903 3.4e-09 65.9 48 66.7
MBI16_g21181_MAGBIO Magnolia biondii HOM05D004236 ORTHO05D004903 4.4e-09 65.5 48 64.6
CSS0010670 Camellia sinensis var. sinensis HOM05D004236 ORTHO05D004903 7.5e-09 64.7 48 66.7
CSS0025273 Camellia sinensis var. sinensis HOM05D004236 ORTHO05D004903 7.5e-09 64.7 48 66.7
GSVIVG01030921001 Vitis vinifera HOM05D004236 ORTHO05D004903 7.5e-09 64.7 48 64.6
CANSAT80G2204 Cannabis sativa HOM05D004236 ORTHO05D004903 1.3e-08 63.9 48 62.5
Lj2A437T35 Lonicera japonica HOM05D004236 ORTHO05D004903 1.3e-08 63.9 51 62.7
Nitab4.5_0000901g0060 Nicotiana tabacum HOM05D004236 ORTHO05D004903 1.3e-08 63.9 51 58.8
Sed0018742 Sechium edule HOM05D004236 ORTHO05D004903 1.3e-08 63.9 48 62.5
DCAR_010720 Daucus carota HOM05D004236 ORTHO05D004903 1.7e-08 63.5 48 62.5
Nitab4.5_0000901g0080 Nicotiana tabacum HOM05D004236 ORTHO05D000001 1.7e-08 63.5 48 62.5
Peaxi162Scf00104g01815 Petunia axillaris HOM05D004236 ORTHO05D004903 1.7e-08 63.5 48 62.5
vmacro05491 Vaccinium macrocarpon HOM05D004236 ORTHO05D004903 1.7e-08 63.5 48 64.6
Lsat_1_v5_gn_4_156001 Lactuca sativa HOM05D004236 ORTHO05D004903 2.2e-08 63.2 48 62.5
Manes.01G114300 Manihot esculenta HOM05D004236 ORTHO05D004903 2.2e-08 63.2 48 62.5
ECA238G4753 Erigeron canadensis HOM05D004236 ORTHO05D004903 2.9e-08 62.8 48 62.5
Nn1g02732 Nelumbo nucifera HOM05D004236 ORTHO05D004903 2.9e-08 62.8 48 60.4
Lsat_1_v5_gn_2_81141 Lactuca sativa HOM05D004236 ORTHO05D004903 3.7e-08 62.4 48 62.5
Lsat_1_v5_gn_4_15520 Lactuca sativa HOM05D004236 ORTHO05D004903 3.7e-08 62.4 48 62.5
Nn4g24056 Nelumbo nucifera HOM05D004236 ORTHO05D004903 3.7e-08 62.4 48 60.4
Rhsim08G0084400 Rhododendron simsii HOM05D004236 ORTHO05D004903 3.7e-08 62.4 48 64.6
SalBow3G2011 Salvia bowleyana HOM05D004236 ORTHO05D004903 3.7e-08 62.4 48 60.4
SalBow3G4331 Salvia bowleyana HOM05D004236 ORTHO05D004903 3.7e-08 62.4 48 60.4
Atru.chr1.1563 Acer truncatum HOM05D004236 ORTHO05D004903 4.9e-08 62.0 48 60.4
Migut.H00256 Erythranthe guttata HOM05D004236 ORTHO05D004903 4.9e-08 62.0 48 60.4
Lalb_Chr04g0257721 Lupinus albus HOM05D004236 ORTHO05D004903 4.9e-08 62.0 48 62.5
Nitab4.5_0000625g0030 Nicotiana tabacum HOM05D004236 ORTHO05D004903 4.9e-08 62.0 48 60.4
CAN.G11.35 Capsicum annuum HOM05D004236 ORTHO05D004903 6.4e-08 61.6 48 62.5
Dinv23330 Davidia involucrata HOM05D004236 ORTHO05D004903 6.4e-08 61.6 48 62.5
FvH4_1g29040 Fragaria vesca HOM05D004236 ORTHO05D004903 6.4e-08 61.6 48 62.5
FAN19G1079 Fragaria x ananassa HOM05D004236 ORTHO05D004903 6.4e-08 61.6 48 62.5
Medtr7g082910 Medicago truncatula HOM05D004236 ORTHO05D004903 6.4e-08 61.6 48 60.4
Nn3g18026 Nelumbo nucifera HOM05D004236 ORTHO05D004903 6.4e-08 61.6 48 60.4
Oeu047429.3 Olea europaea HOM05D004236 ORTHO05D004903 6.4e-08 61.6 48 60.4
Prupe.3G150900 Prunus persica HOM05D004236 ORTHO05D004903 6.4e-08 61.6 48 62.5
PGSC0003DMG400016698 Solanum tuberosum HOM05D004236 ORTHO05D004903 8.3e-08 61.2 48 62.5
ATR0326G065 Amborella trichopoda HOM05D004236 ORTHO05D004903 1.1e-07 60.8 48 60.4
TAR622G0693 Trochodendron aralioides HOM05D004236 ORTHO05D004903 1.1e-07 60.8 48 58.3
TWI53G1957 Tripterygium wilfordii HOM05D004236 ORTHO05D004903 1.4e-07 60.5 48 60.4
Ca_08100_v3 Cicer arietinum L. HOM05D004236 ORTHO05D004903 1.9e-07 60.1 48 60.4
CiPaw.04G044800 Carya illinoinensis HOM05D004236 ORTHO05D004903 2.4e-07 59.7 48 60.4
Dinv14861 Davidia involucrata HOM05D004236 ORTHO05D004903 2.4e-07 59.7 48 60.4
FAN23G2326 Fragaria x ananassa HOM05D004236 ORTHO05D004903 3.2e-07 59.3 48 60.4
FAN26G2772 Fragaria x ananassa HOM05D004236 ORTHO05D004903 3.2e-07 59.3 48 60.4
Oeu048228.1 Olea europaea HOM05D004236 ORTHO05D004903 3.2e-07 59.3 48 56.2
RcHm_v2.0_Chr3g0493661 Rosa chinensis HOM05D004236 ORTHO05D004903 3.2e-07 59.3 48 60.4
Aa31LG2G3180 Aethionema arabicum HOM05D004236 ORTHO05D004903 4.1e-07 58.9 48 56.2
BcaB01g01715 Brassica carinata HOM05D004236 ORTHO05D004903 5.4e-07 58.5 48 56.2
BcaB03g15254 Brassica carinata HOM05D004236 ORTHO05D004903 5.4e-07 58.5 48 56.2
BcaC08g46105 Brassica carinata HOM05D004236 ORTHO05D004903 5.4e-07 58.5 48 56.2
A07p33520 Brassica napus HOM05D004236 ORTHO05D004903 5.4e-07 58.5 48 56.2
C06p39930 Brassica napus HOM05D004236 ORTHO05D004903 5.4e-07 58.5 48 56.2
BolC6t39081H Brassica oleracea HOM05D004236 ORTHO05D004903 5.4e-07 58.5 48 56.2
BraA07t30978Z Brassica rapa HOM05D004236 ORTHO05D004903 5.4e-07 58.5 48 56.2
CARHR058730 Cardamine hirsuta HOM05D004236 ORTHO05D004903 5.4e-07 58.5 48 56.2
CiPaw.03G066200 Carya illinoinensis HOM05D004236 ORTHO05D004903 5.4e-07 58.5 48 54.2
ClCG05G010730 Citrullus lanatus HOM05D004236 ORTHO05D004903 5.4e-07 58.5 48 58.3
MELO3C020314.2 Cucumis melo HOM05D004236 ORTHO05D004903 5.4e-07 58.5 48 58.3
Psat3g096800 Pisum sativum HOM05D004236 ORTHO05D004903 5.4e-07 58.5 48 56.2
PSO017G0657 Papaver somniferum HOM05D004236 ORTHO05D004903 7.1e-07 58.2 47 61.7
PSO478G1960 Papaver somniferum HOM05D004236 ORTHO05D004903 7.1e-07 58.2 47 61.7
TPR.G28393 Trifolium pratense HOM05D004236 ORTHO05D004903 7.1e-07 58.2 48 56.2
Potri.015G062400 Populus trichocarpa HOM05D004236 ORTHO05D004903 9.2e-07 57.8 49 61.2
TAR629G1587 Trochodendron aralioides HOM05D004236 ORTHO05D004903 9.2e-07 57.8 48 58.3
BcaB08g34729 Brassica carinata HOM05D000498 ORTHO05D000354 1.2e-06 57.4 45 57.8
AUR62023213 Chenopodium quinoa HOM05D004236 ORTHO05D004903 1.2e-06 57.4 48 54.2
AUR62023259 Chenopodium quinoa HOM05D004236 ORTHO05D004903 1.2e-06 57.4 48 54.2
Lj4A180T59 Lonicera japonica HOM05D004236 ORTHO05D004903 1.2e-06 57.4 48 60.4
MD17G1253400 Malus domestica HOM05D004236 ORTHO05D004903 1.2e-06 57.4 48 56.2
SGA_v2.0_scaffold202G41491 Striga asiatica HOM05D004236 ORTHO05D004903 1.2e-06 57.4 48 60.4
MD09G1258900 Malus domestica HOM05D004236 ORTHO05D004903 1.6e-06 57.0 48 54.2
Sopen03g007300 Solanum pennellii HOM05D004236 ORTHO05D004903 1.6e-06 57.0 48 58.3
THA.LOC104805594 Tarenaya hassleriana HOM05D004236 ORTHO05D004903 1.6e-06 57.0 48 58.3
Glyma.02G090500 Glycine max HOM05D004236 ORTHO05D004903 2.1e-06 56.6 48 56.2
Glyma.18G292800 Glycine max HOM05D004236 ORTHO05D004903 2.1e-06 56.6 48 56.2
Sed0017902 Sechium edule HOM05D004236 ORTHO05D004903 2.1e-06 56.6 48 56.2
Actinidia13574 Actinidia chinensis HOM05D004236 ORTHO05D004903 2.7e-06 56.2 47 61.7
Phvul.008G009300 Phaseolus vulgaris HOM05D004236 ORTHO05D004903 2.7e-06 56.2 48 56.2
Hund13695 Selenicereus undatus HOM05D004236 ORTHO05D004903 2.7e-06 56.2 48 54.2
VMungo1383G0222 Vigna mungo HOM05D004236 ORTHO05D004903 2.7e-06 56.2 48 56.2
Ah.16g101430 Amaranthus hybridus HOM05D004236 ORTHO05D004903 3.5e-06 55.8 48 52.1
Aqoxy3G00154 Aquilegia oxysepala HOM05D004236 ORTHO05D004903 3.5e-06 55.8 48 60.4
EL10Ac2g04514 Beta vulgaris HOM05D004236 ORTHO05D004903 3.5e-06 55.8 48 52.1
Ciclev10012115m.g Citrus clementina HOM05D004236 ORTHO05D004903 4.6e-06 55.5 49 57.1
COL.COLO4_27143 Corchorus olitorius HOM05D004236 ORTHO05D004903 4.6e-06 55.5 47 61.7
Duzib133G1178 Durio zibethinus HOM05D004236 ORTHO05D004903 4.6e-06 55.5 47 61.7
Duzib138G1869 Durio zibethinus HOM05D004236 ORTHO05D004903 4.6e-06 55.5 47 61.7
Thecc.04G125200 Theobroma cacao HOM05D004236 ORTHO05D004903 4.6e-06 55.5 47 61.7
Gohir.A11G167000 Gossypium hirsutum HOM05D004236 ORTHO05D004903 6.0e-06 55.1 47 61.7
Gohir.D11G173300 Gossypium hirsutum HOM05D004236 ORTHO05D004903 6.0e-06 55.1 47 61.7
Gorai.007G185600 Gossypium raimondii HOM05D004236 ORTHO05D004903 6.0e-06 55.1 47 61.7
HanXRQChr09g0262441 Helianthus annuus HOM05D004236 ORTHO05D004903 6.0e-06 55.1 48 60.4
TWI77G0072 Tripterygium wilfordii HOM05D004236 ORTHO05D004903 6.0e-06 55.1 48 54.2
Eucgr.J01534 Eucalyptus grandis HOM05D004236 ORTHO05D004903 7.8e-06 54.7 50 60.0


User provided reference genes

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