Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 1.0e-117 426.8 218 100.0
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 1.7e-56 223.4 193 63.7
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 2.2e-56 223.0 224 58.0
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 2.2e-56 223.0 171 70.8
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 1.1e-55 220.7 228 58.8
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 1.9e-55 219.9 177 66.7
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 7.1e-55 218.0 169 69.8
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 4.6e-54 215.3 215 56.7
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 1.8e-53 213.4 193 60.6
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 3.0e-53 212.6 168 66.1
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 3.9e-53 212.2 186 60.8
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 5.1e-53 211.8 231 54.1
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 5.1e-53 211.8 178 62.9
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 8.7e-53 211.1 194 60.3
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 8.7e-53 211.1 221 55.2
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 8.7e-53 211.1 227 53.3
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 1.1e-52 210.7 186 63.4
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 1.1e-52 210.7 188 60.1
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 1.1e-52 210.7 174 64.4
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 1.1e-52 210.7 174 64.4
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 1.1e-52 210.7 227 53.3
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 1.5e-52 210.3 181 58.6
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 1.5e-52 210.3 181 62.4
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 1.5e-52 210.3 169 65.7
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 1.5e-52 210.3 229 53.7
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 1.5e-52 210.3 198 61.1
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 2.5e-52 209.5 207 58.9
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 2.5e-52 209.5 234 52.6
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 3.3e-52 209.1 215 54.9
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 3.3e-52 209.1 190 61.1
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 3.3e-52 209.1 224 53.1
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 4.3e-52 208.8 230 54.3
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 4.3e-52 208.8 230 54.3
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 5.6e-52 208.4 166 65.7
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 5.6e-52 208.4 183 63.4
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 7.4e-52 208.0 175 60.0
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 7.4e-52 208.0 220 52.7
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 7.4e-52 208.0 187 60.4
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 9.6e-52 207.6 170 64.7
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 9.6e-52 207.6 169 63.3
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 9.6e-52 207.6 168 64.3
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.3e-51 207.2 169 65.7
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 1.3e-51 207.2 168 64.9
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 1.3e-51 207.2 170 62.9
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 1.6e-51 206.8 158 67.7
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 2.1e-51 206.5 171 63.7
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 2.1e-51 206.5 168 63.1
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 2.8e-51 206.1 187 59.4
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 2.8e-51 206.1 182 61.0
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 4.8e-51 205.3 155 69.0
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 4.8e-51 205.3 171 64.9
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 4.8e-51 205.3 169 63.9
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 6.2e-51 204.9 186 61.3
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 8.1e-51 204.5 169 63.3
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 8.1e-51 204.5 205 57.1
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 1.1e-50 204.1 186 60.2
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 1.1e-50 204.1 170 63.5
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 1.4e-50 203.8 195 58.5
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 1.4e-50 203.8 171 60.8
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 1.8e-50 203.4 182 59.3
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 2.4e-50 203.0 170 62.4
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 2.4e-50 203.0 168 62.5
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 2.4e-50 203.0 168 61.9
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 2.4e-50 203.0 186 56.5
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 3.1e-50 202.6 181 58.0
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 3.1e-50 202.6 169 62.1
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 4.0e-50 202.2 172 63.4
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 6.9e-50 201.4 199 55.3
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 9.0e-50 201.1 153 68.6
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 1.5e-49 200.3 189 60.3
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 1.5e-49 200.3 231 51.9
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 2.0e-49 199.9 205 55.1
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 3.4e-49 199.1 172 59.9
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 1.0e-48 197.6 176 60.2
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 2.9e-48 196.1 168 63.1
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 4.9e-48 195.3 168 61.9
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 6.5e-48 194.9 208 53.8
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.1e-47 194.1 168 61.3
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 1.9e-47 193.4 179 60.9
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 2.5e-47 193.0 178 60.7
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 2.5e-47 193.0 178 60.7
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 2.5e-47 193.0 149 67.8
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 4.2e-47 192.2 147 68.7
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 9.3e-47 191.0 198 56.1
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 2.1e-46 189.9 179 59.2
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 2.7e-46 189.5 189 58.2
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.0e-45 187.6 166 62.7
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 1.8e-45 186.8 168 60.1
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 2.3e-45 186.4 206 55.8
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 3.3e-44 182.6 166 60.8
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 7.4e-44 181.4 204 51.5
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 1.3e-43 180.6 193 51.8
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 2.8e-43 179.5 158 62.0
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 1.4e-42 177.2 151 58.3
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 1.2e-41 174.1 139 64.7
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 2.6e-41 172.9 152 57.2
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 4.5e-41 172.2 169 55.6
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 5.9e-41 171.8 121 72.7
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 2.9e-40 169.5 120 73.3
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 9.3e-39 164.5 187 52.4
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 3.9e-37 159.1 187 48.7
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 7.4e-36 154.8 122 66.4
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 5.3e-26 122.1 114 57.9
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 1.2e-25 120.9 84 72.6
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 3.2e-23 112.8 70 77.1
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 3.2e-23 112.8 70 77.1
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 1.4e-21 107.5 155 44.5
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 2.0e-20 103.6 91 58.2
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 4.4e-20 102.4 166 36.7
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 2.2e-19 100.1 123 47.2
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 2.2e-19 100.1 115 44.3
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 1.8e-18 97.1 100 52.0
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 3.5e-17 92.8 90 52.2
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 1.7e-16 90.5 58 70.7
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 3.5e-09 66.2 46 71.7


User provided reference genes

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