Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_736.g22517 Utricularia gibba HOM05D003701 ORTHO05D004771 3.8e-213 744.6 374 100.0
unitig_899.g14441 Utricularia gibba HOM05D003701 ORTHO05D004771 4.9e-189 664.5 427 81.5
MSTRG.8153 Avicennia marina HOM05D003701 ORTHO05D004771 1.5e-166 589.7 426 71.6
SGA_v2.0_scaffold51G18675 Striga asiatica HOM05D003701 ORTHO05D004771 2.5e-164 582.4 437 71.2
MSTRG.367 Avicennia marina HOM05D003701 ORTHO05D004771 5.5e-164 581.3 425 70.8
Migut.F01774 Erythranthe guttata HOM05D003701 ORTHO05D004771 1.8e-162 576.2 423 70.4
CAN.G186.45 Capsicum annuum HOM05D003701 ORTHO05D004771 2.8e-160 568.9 421 69.6
Sopen04g019270 Solanum pennellii HOM05D003701 ORTHO05D004771 4.8e-160 568.2 427 69.1
PGSC0003DMG400024392 Solanum tuberosum HOM05D003701 ORTHO05D004771 1.1e-159 567.0 427 68.9
Dinv11780 Davidia involucrata HOM05D003701 ORTHO05D004771 5.3e-159 564.7 428 68.9
Solyc04g049350.4 Solanum lycopersicum HOM05D003701 ORTHO05D004771 5.3e-159 564.7 427 68.9
PGSC0003DMG400016016 Solanum tuberosum HOM05D003701 ORTHO05D004771 5.3e-159 564.7 421 69.4
Sopen04g004770 Solanum pennellii HOM05D003701 ORTHO05D004771 1.3e-157 560.1 421 67.9
Nitab4.5_0005490g0010 Nicotiana tabacum HOM05D003701 ORTHO05D004771 1.7e-157 559.7 427 68.4
Solyc04g009620.4 Solanum lycopersicum HOM05D003701 ORTHO05D004771 2.5e-156 555.8 421 67.9
Peaxi162Scf00747g00122 Petunia axillaris HOM05D003701 ORTHO05D004771 3.6e-155 552.0 424 68.4
Hma1.2p1_1004F.1_g246800 Hydrangea macrophylla HOM05D003701 ORTHO05D004771 8.8e-154 547.4 438 66.4
Lj1A914T43 Lonicera japonica HOM05D003701 ORTHO05D004771 1.5e-153 546.6 428 68.9
DCAR_015315 Daucus carota HOM05D003701 ORTHO05D004771 3.3e-153 545.4 426 68.5
HanXRQChr09g0249701 Helianthus annuus HOM05D003701 ORTHO05D004771 3.3e-153 545.4 426 67.8
Manes.10G045200 Manihot esculenta HOM05D003701 ORTHO05D004771 5.7e-153 544.7 432 67.6
Hund12041 Selenicereus undatus HOM05D003701 ORTHO05D004771 5.7e-153 544.7 427 68.1
Ciclev10031547m.g Citrus clementina HOM05D003701 ORTHO05D004771 9.7e-153 543.9 437 68.0
HanXRQChr15g0496661 Helianthus annuus HOM05D003701 ORTHO05D004771 4.8e-152 541.6 427 68.1
Sc06g0004590 Simmondsia chinensis HOM05D003701 ORTHO05D004771 4.8e-152 541.6 431 67.5
ECA232G2521 Erigeron canadensis HOM05D003701 ORTHO05D004771 8.2e-152 540.8 426 67.1
GSVIVG01016288001 Vitis vinifera HOM05D003701 ORTHO05D004771 1.4e-151 540.0 425 67.3
CSS0025729 Camellia sinensis var. sinensis HOM05D003701 ORTHO05D004771 1.8e-151 539.7 435 66.7
Sc09g0006470 Simmondsia chinensis HOM05D003701 ORTHO05D004771 2.4e-151 539.3 435 66.9
TAR623G1268 Trochodendron aralioides HOM05D003701 ORTHO05D004771 7.0e-151 537.7 428 66.8
Ah.06g192010 Amaranthus hybridus HOM05D003701 ORTHO05D004771 1.2e-150 537.0 425 66.8
Nitab4.5_0001029g0070 Nicotiana tabacum HOM05D003701 ORTHO05D004771 1.2e-150 537.0 455 63.5
TAR633G1876 Trochodendron aralioides HOM05D003701 ORTHO05D004771 2.0e-150 536.2 437 65.9
Atru.chr12.740 Acer truncatum HOM05D003701 ORTHO05D004771 4.5e-150 535.0 428 67.1
Glyma.20G179500 Glycine max HOM05D003701 ORTHO05D004771 4.5e-150 535.0 423 67.1
Lsat_1_v5_gn_2_114381 Lactuca sativa HOM05D003701 ORTHO05D004771 1.3e-149 533.5 426 66.9
arahy.Tifrunner.gnm1.ann1.X76XU5 Arachis hypogaea HOM05D003701 ORTHO05D004771 2.2e-149 532.7 426 66.7
VMungo0720G1162 Vigna mungo HOM05D003701 ORTHO05D004771 8.5e-149 530.8 427 66.7
arahy.Tifrunner.gnm1.ann1.V7IKH4 Arachis hypogaea HOM05D003701 ORTHO05D004771 1.5e-148 530.0 426 66.7
Thecc.10G072600 Theobroma cacao HOM05D003701 ORTHO05D004771 3.2e-148 528.9 421 65.3
Actinidia38848 Actinidia chinensis HOM05D003701 ORTHO05D004771 4.2e-148 528.5 424 67.2
THA.LOC104827296 Tarenaya hassleriana HOM05D003701 ORTHO05D004771 7.2e-148 527.7 432 66.7
TPR.G1904 Trifolium pratense HOM05D003701 ORTHO05D004771 9.4e-148 527.3 422 66.6
TWI74G0111 Tripterygium wilfordii HOM05D003701 ORTHO05D004771 9.4e-148 527.3 431 65.2
TWI74G0263 Tripterygium wilfordii HOM05D003701 ORTHO05D004771 9.4e-148 527.3 431 65.2
Phvul.007G094200 Phaseolus vulgaris HOM05D003701 ORTHO05D004771 2.7e-147 525.8 427 65.8
PSO063G5795 Papaver somniferum HOM05D003701 ORTHO05D004771 3.6e-147 525.4 419 66.8
A05p20860 Brassica napus HOM05D003701 ORTHO05D004771 4.7e-147 525.0 428 65.7
BraA05t20991Z Brassica rapa HOM05D003701 ORTHO05D004771 4.7e-147 525.0 428 65.7
BcaC05g27549 Brassica carinata HOM05D003701 ORTHO05D004771 8.0e-147 524.2 437 64.8
C05p35350 Brassica napus HOM05D003701 ORTHO05D004771 8.0e-147 524.2 437 64.8
BolC5t32248H Brassica oleracea HOM05D003701 ORTHO05D004771 8.0e-147 524.2 437 64.8
Gohir.A05G297100 Gossypium hirsutum HOM05D003701 ORTHO05D004771 8.0e-147 524.2 421 64.4
Gohir.D05G297000 Gossypium hirsutum HOM05D003701 ORTHO05D004771 8.0e-147 524.2 421 64.6
Gorai.009G314200 Gossypium raimondii HOM05D003701 ORTHO05D004771 8.0e-147 524.2 421 64.6
PSO339G3023 Papaver somniferum HOM05D003701 ORTHO05D004771 8.0e-147 524.2 380 70.8
BolC8t47272H Brassica oleracea HOM05D003701 ORTHO05D004771 1.0e-146 523.9 436 64.9
Medtr1g095250 Medicago truncatula HOM05D003701 ORTHO05D004771 1.0e-146 523.9 425 65.9
A08p04400 Brassica napus HOM05D003701 ORTHO05D004771 1.4e-146 523.5 436 64.9
BraA08t32466Z Brassica rapa HOM05D003701 ORTHO05D004771 1.4e-146 523.5 436 64.9
Ca_10573_v3 Cicer arietinum L. HOM05D003701 ORTHO05D004771 1.4e-146 523.5 425 65.9
Ca_29596_v3 Cicer arietinum L. HOM05D003701 ORTHO05D004771 1.4e-146 523.5 425 65.9
BcaC07g37102 Brassica carinata HOM05D003701 ORTHO05D004771 1.8e-146 523.1 436 64.9
C08p04710 Brassica napus HOM05D003701 ORTHO05D004771 1.8e-146 523.1 436 64.9
Gohir.A10G206500 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.8e-146 523.1 421 64.8
BcaB02g11304 Brassica carinata HOM05D003701 ORTHO05D004771 2.3e-146 522.7 402 67.9
Duzib106G0278 Durio zibethinus HOM05D003701 ORTHO05D004771 2.3e-146 522.7 421 64.4
Potri.008G040700 Populus trichocarpa HOM05D003701 ORTHO05D004771 2.3e-146 522.7 405 67.7
BcaB04g17381 Brassica carinata HOM05D003701 ORTHO05D004771 3.0e-146 522.3 433 65.4
AUR62037661 Chenopodium quinoa HOM05D003701 ORTHO05D004771 3.0e-146 522.3 443 63.9
Glyma.10G211400 Glycine max HOM05D003701 ORTHO05D004771 3.0e-146 522.3 427 65.3
Potri.010G221600 Populus trichocarpa HOM05D003701 ORTHO05D004771 3.0e-146 522.3 431 65.7
Thhalv10011486m.g Eutrema salsugineum HOM05D003701 ORTHO05D004771 4.0e-146 521.9 430 65.6
Sp1g35740 Schrenkiella parvula HOM05D003701 ORTHO05D004771 4.0e-146 521.9 429 65.5
FAN03G0046 Fragaria x ananassa HOM05D003701 ORTHO05D004771 5.2e-146 521.5 427 65.6
QL08p056106 Quercus lobata HOM05D003701 ORTHO05D004771 5.2e-146 521.5 432 66.0
AUR62041045 Chenopodium quinoa HOM05D003701 ORTHO05D004771 6.7e-146 521.2 427 66.0
CARHR038850 Cardamine hirsuta HOM05D003701 ORTHO05D004771 8.8e-146 520.8 395 68.1
Lalb_Chr02g0142141 Lupinus albus HOM05D003701 ORTHO05D004771 8.8e-146 520.8 423 66.0
Gohir.D10G214600 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.2e-145 520.4 421 64.6
Lalb_Chr06g0162271 Lupinus albus HOM05D003701 ORTHO05D004771 1.5e-145 520.0 419 67.1
FAN10G2919 Fragaria x ananassa HOM05D003701 ORTHO05D004771 2.0e-145 519.6 427 65.3
Lj5g0008768 Lotus japonicus HOM05D003701 ORTHO05D004771 2.0e-145 519.6 420 66.2
Carub.0001s3800 Capsella rubella HOM05D003701 ORTHO05D004771 2.6e-145 519.2 423 65.5
MD01G1108900 Malus domestica HOM05D003701 ORTHO05D004771 2.6e-145 519.2 436 64.7
AT1G48850 Arabidopsis thaliana HOM05D003701 ORTHO05D004771 3.3e-145 518.8 421 65.8
AL1G55580 Arabidopsis lyrata HOM05D003701 ORTHO05D004771 4.4e-145 518.5 423 65.5
FvH4_7g19670 Fragaria vesca HOM05D003701 ORTHO05D004771 5.7e-145 518.1 429 65.5
CiPaw.02G174300 Carya illinoinensis HOM05D003701 ORTHO05D004771 9.7e-145 517.3 423 64.5
FAN06G0474 Fragaria x ananassa HOM05D003701 ORTHO05D004771 9.7e-145 517.3 427 65.1
RcHm_v2.0_Chr1g0363491 Rosa chinensis HOM05D003701 ORTHO05D004771 9.7e-145 517.3 429 65.3
Nn2g13085 Nelumbo nucifera HOM05D003701 ORTHO05D004771 1.3e-144 516.9 427 63.9
Eucgr.G02824 Eucalyptus grandis HOM05D003701 ORTHO05D004771 2.2e-144 516.2 423 64.1
Aqoxy1G01249 Aquilegia oxysepala HOM05D003701 ORTHO05D004771 2.8e-144 515.8 392 67.1
MBI02_g43493_MAGBIO Magnolia biondii HOM05D003701 ORTHO05D004771 3.7e-144 515.4 429 64.8
Sabra08G0027700 Salix brachista HOM05D003701 ORTHO05D004771 6.3e-144 514.6 443 63.4
ATR0115G006 Amborella trichopoda HOM05D003701 ORTHO05D004771 1.1e-143 513.8 396 67.7
EL10Ac2g03249 Beta vulgaris HOM05D003701 ORTHO05D004771 2.4e-143 512.7 427 65.3
Cpa.g.sc53.71 Carica papaya HOM05D003701 ORTHO05D004771 3.1e-143 512.3 374 70.1
Migut.F01773 Erythranthe guttata HOM05D003701 ORTHO05D004771 5.3e-143 511.5 403 67.2
Gorai.011G240200 Gossypium raimondii HOM05D003701 ORTHO05D004771 7.0e-143 511.1 376 69.7
CDE04G2332 Ceratophyllum demersum HOM05D003701 ORTHO05D004771 1.6e-142 510.0 428 63.8
MBI10_g04889_MAGBIO Magnolia biondii HOM05D003701 ORTHO05D004771 1.6e-142 510.0 441 62.8
MD07G1175200 Malus domestica HOM05D003701 ORTHO05D004771 2.7e-142 509.2 428 63.8
Aa31LG10G4830 Aethionema arabicum HOM05D003701 ORTHO05D004771 1.0e-141 507.3 430 63.0
arahy.Tifrunner.gnm1.ann1.6FL4NC Arachis hypogaea HOM05D003701 ORTHO05D004771 8.5e-141 504.2 417 63.8
Rhsim09G0152400 Rhododendron simsii HOM05D003701 ORTHO05D004771 8.5e-141 504.2 501 56.1
CsaV3_6G036360 Cucumis sativus L. HOM05D003701 ORTHO05D004771 1.9e-140 503.1 426 61.7
FAN01G1080 Fragaria x ananassa HOM05D003701 ORTHO05D004771 1.9e-140 503.1 466 59.9
SEGI_31492 Sequoiadendron giganteum HOM05D003701 ORTHO05D004771 1.9e-140 503.1 421 64.1
PGR142G1908 Punica granatum HOM05D003701 ORTHO05D004771 2.5e-140 502.7 403 64.0
MELO3C019790.2 Cucumis melo HOM05D003701 ORTHO05D004771 1.2e-139 500.4 426 61.7
ClCG08G007450 Citrullus lanatus HOM05D003701 ORTHO05D004771 2.1e-139 499.6 426 61.5
Actinidia03057 Actinidia chinensis HOM05D003701 ORTHO05D004771 1.8e-138 496.5 425 61.9
vmacro04876 Vaccinium macrocarpon HOM05D003701 ORTHO05D004771 1.8e-138 496.5 543 52.1
DCAR_012659 Daucus carota HOM05D003701 ORTHO05D004771 2.3e-138 496.1 401 64.1
Sabra10G0171500 Salix brachista HOM05D003701 ORTHO05D004771 2.3e-138 496.1 480 59.0
Gorai.011G240100 Gossypium raimondii HOM05D003701 ORTHO05D004771 4.0e-138 495.4 421 62.0
SalBow4G1339 Salvia bowleyana HOM05D003701 ORTHO05D004771 1.2e-137 493.8 403 65.0
Sed0016616 Sechium edule HOM05D003701 ORTHO05D004771 2.0e-137 493.0 425 60.9
CANSAT56G3258 Cannabis sativa HOM05D003701 ORTHO05D004771 5.7e-137 491.5 428 61.2
Gohir.A10G206400 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.3e-136 490.3 421 61.3
HPP92_012666 Vanilla planifolia HOM05D003701 ORTHO05D004771 1.7e-136 490.0 394 66.0
AagrBONN_evm.TU.Sc2ySwM_369.393 Anthoceros agrestis HOM05D003701 ORTHO05D004771 3.7e-136 488.8 388 66.8
Mapoly0007s0052 Marchantia polymorpha HOM05D003701 ORTHO05D004771 3.7e-136 488.8 388 66.5
FAN10G2344 Fragaria x ananassa HOM05D003701 ORTHO05D004771 3.1e-135 485.7 427 63.0
Os03g0254800 Oryza sativa ssp. japonica HOM05D003701 ORTHO05D004771 9.1e-135 484.2 389 64.0
CSS0011231 Camellia sinensis var. sinensis HOM05D003701 ORTHO05D004771 2.7e-134 482.6 397 63.5
SMO146G0105 Selaginella moellendorffii HOM05D003701 ORTHO05D004771 5.9e-134 481.5 388 65.7
CAN.G186.44 Capsicum annuum HOM05D003701 ORTHO05D004771 5.0e-133 478.4 380 63.2
GSVIVG01025176001 Vitis vinifera HOM05D003701 ORTHO05D004771 8.6e-133 477.6 387 63.0
Duzib114G1041 Durio zibethinus HOM05D003701 ORTHO05D004771 6.8e-130 468.0 428 60.7
arahy.Tifrunner.gnm1.ann1.914CGH Arachis hypogaea HOM05D003701 ORTHO05D004771 1.8e-127 459.9 342 68.4
Gohir.D05G297025 Gossypium hirsutum HOM05D003701 ORTHO05D004771 4.1e-127 458.8 410 60.0
Oeu027479.1 Olea europaea HOM05D003701 ORTHO05D004771 2.8e-123 446.0 341 70.1
Psat6g184400 Pisum sativum HOM05D003701 ORTHO05D004771 1.3e-120 437.2 359 64.3
Oeu007390.4 Olea europaea HOM05D003701 ORTHO05D004771 1.2e-118 430.6 332 69.3
Prupe.2G214400 Prunus persica HOM05D003701 ORTHO05D004771 7.8e-118 427.9 364 62.9
CANSAT78G2428 Cannabis sativa HOM05D003701 ORTHO05D004771 2.1e-115 419.9 368 58.2
CDE07G1562 Ceratophyllum demersum HOM05D003701 ORTHO05D004771 2.8e-115 419.5 397 58.7
Dinv31329 Davidia involucrata HOM05D003701 ORTHO05D004771 3.6e-115 419.1 317 71.0
CiPaw.01G273500 Carya illinoinensis HOM05D003701 ORTHO05D004771 1.3e-112 410.6 335 66.0
Cre03.g145747 Chlamydomonas reinhardtii HOM05D003701 ORTHO05D004771 3.2e-111 406.0 366 59.0
PRCOL_00001179 Prasinoderma coloniale HOM05D003701 ORTHO05D004771 1.2e-110 404.1 365 60.8
Zm00001eb011020 Zea mays HOM05D003701 ORTHO05D004771 7.8e-110 401.4 359 60.2
MCO05G587 Micromonas commoda HOM05D003701 ORTHO05D004771 4.7e-107 392.1 365 57.3
Eucgr.J01090 Eucalyptus grandis HOM05D003701 ORTHO05D004771 1.3e-101 374.0 337 59.9
Zm00001eb398410 Zea mays HOM05D003701 ORTHO05D004771 4.0e-98 362.5 317 58.7
COL.COLO4_23690 Corchorus olitorius HOM05D003701 ORTHO05D004771 1.2e-89 334.3 261 65.9
Pp3c1_35940 Physcomitrium patens HOM05D003701 ORTHO05D004771 1.7e-85 320.5 279 60.6
Cc09_g02040 Coffea canephora HOM05D003701 ORTHO05D004771 4.2e-79 299.3 168 86.9
Haze_16899 Corylus avellana HOM05D003701 ORTHO05D004771 2.1e-78 297.0 228 68.9
COL.COLO4_23691 Corchorus olitorius HOM05D003701 ORTHO05D004771 3.5e-78 296.2 223 68.2
CBR_g41627 Chara braunii HOM05D003701 ORTHO05D004771 6.7e-77 292.0 260 59.2
Cc09_g02030 Coffea canephora HOM05D003701 ORTHO05D004771 2.2e-72 276.9 234 63.2
Gohir.D10G214466 Gossypium hirsutum HOM05D003701 ORTHO05D004771 6.0e-70 268.9 168 78.6
TAR636G0034 Trochodendron aralioides HOM05D003701 ORTHO05D004771 8.2e-67 258.5 161 73.3
TAR636G0416 Trochodendron aralioides HOM05D003701 ORTHO05D004771 8.2e-67 258.5 161 73.3
Gohir.D10G214532 Gossypium hirsutum HOM05D003701 ORTHO05D004771 1.6e-62 244.2 232 55.6
Haze_27259 Corylus avellana HOM05D003701 ORTHO05D004771 6.0e-62 242.3 359 39.6
MSTRG.366 Avicennia marina HOM05D003701 ORTHO05D004771 2.8e-59 233.4 138 81.2
Cfa022484 Carpinus fangiana HOM05D003701 ORTHO05D004771 2.4e-58 230.3 355 41.1
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 1.7e-56 224.2 124 83.1
MD01G1109200 Malus domestica HOM05D003701 ORTHO05D004771 9.4e-39 165.2 139 63.3
RcHm_v2.0_Chr4g0427911 Rosa chinensis HOM05D003701 ORTHO05D004771 8.2e-35 152.1 206 47.6
FAN12G0728 Fragaria x ananassa HOM05D003701 ORTHO05D004771 3.0e-29 133.7 211 41.7
Glyma.14G185633 Glycine max HOM05D003701 ORTHO05D004771 9.7e-28 128.6 74 81.1
SMO173G0015 Selaginella moellendorffii HOM05D003701 ORTHO05D004771 1.2e-25 121.7 191 44.0
FAN01G1877 Fragaria x ananassa HOM05D003701 ORTHO05D208017 8.3e-19 99.0 116 50.9
FAN17G1952 Fragaria x ananassa HOM05D003701 ORTHO05D004771 2.0e-17 94.4 243 32.9
Oeu043945.1 Olea europaea HOM05D003701 ORTHO05D004771 1.0e-16 92.0 46 91.3
FAN12G0587 Fragaria x ananassa HOM05D003701 ORTHO05D004771 3.8e-16 90.1 90 53.3
QL07p006097 Quercus lobata HOM05D003701 ORTHO05D030296 1.2e-12 78.6 51 72.5
VMungo0647G0194 Vigna mungo HOM05D003701 ORTHO05D432816 6.3e-11 72.8 55 65.5
CBR_g74262 Chara braunii HOM05D003701 ORTHO05D004771 4.5e-09 66.6 43 79.1
Oeu052763.1 Olea europaea HOM05D003701 ORTHO05D030296 2.5e-07 60.8 28 96.4
Rhsim05G0028600 Rhododendron simsii HOM05D000745 ORTHO05D000641 2.1e-06 57.8 28 78.6
C02p38530 Brassica napus HOM05D003701 ORTHO05D101262 8.0e-06 55.8 72 45.8


User provided reference genes

Program Settings