Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_736.g22502 Utricularia gibba HOM05D008013 ORTHO05D010149 3.5e-40 167.9 89 100.0
Migut.F02069 Erythranthe guttata HOM05D008013 ORTHO05D010149 1.4e-25 119.4 81 77.8
Oeu001239.1 Olea europaea HOM05D008013 ORTHO05D010149 4.1e-25 117.9 81 76.5
THA.LOC104803516 Tarenaya hassleriana HOM05D008013 ORTHO05D010149 1.0e-23 113.2 81 70.4
Atru.chr12.2150 Acer truncatum HOM05D008013 ORTHO05D010149 1.3e-23 112.8 83 69.9
CANSAT54G1767 Cannabis sativa HOM05D000837 ORTHO05D008386 5.0e-23 110.9 87 63.2
Dinv02912 Davidia involucrata HOM05D008013 ORTHO05D010149 1.5e-22 109.4 81 71.6
Cc09_g03310 Coffea canephora HOM05D008013 ORTHO05D010149 1.9e-22 109.0 81 71.6
Haze_04520 Corylus avellana HOM05D008013 ORTHO05D010149 5.5e-22 107.5 81 66.7
TPR.G29412 Trifolium pratense HOM05D008013 ORTHO05D010149 5.5e-22 107.5 81 64.2
Ciclev10013456m.g Citrus clementina HOM05D008013 ORTHO05D010149 9.4e-22 106.7 81 66.7
Lalb_Chr19g0126801 Lupinus albus HOM05D008013 ORTHO05D010149 1.2e-21 106.3 81 64.2
HanXRQChr05g0156911 Helianthus annuus HOM05D000837 ORTHO05D008386 2.1e-21 105.5 82 72.0
Lj1g0002079 Lotus japonicus HOM05D008013 ORTHO05D010149 2.1e-21 105.5 81 63.0
CiPaw.08G117300 Carya illinoinensis HOM05D008013 ORTHO05D010149 2.7e-21 105.1 81 64.2
CAN.G4.29 Capsicum annuum HOM05D008013 ORTHO05D010149 3.6e-21 104.8 79 69.6
RcHm_v2.0_Chr3g0448311 Rosa chinensis HOM05D008013 ORTHO05D010149 3.6e-21 104.8 81 65.4
Rhsim09G0131000 Rhododendron simsii HOM05D008013 ORTHO05D010149 8.0e-21 103.6 82 65.9
MD12G1257800 Malus domestica HOM05D008013 ORTHO05D010149 1.0e-20 103.2 81 65.4
CSS0003713 Camellia sinensis var. sinensis HOM05D008013 ORTHO05D010149 1.4e-20 102.8 81 64.2
CSS0043393 Camellia sinensis var. sinensis HOM05D008013 ORTHO05D010149 1.4e-20 102.8 81 64.2
MD04G1240900 Malus domestica HOM05D008013 ORTHO05D010149 1.4e-20 102.8 81 65.4
Solyc04g150139.1 Solanum lycopersicum HOM05D008013 ORTHO05D010149 1.4e-20 102.8 79 69.6
Actinidia34775 Actinidia chinensis HOM05D008013 ORTHO05D010149 1.8e-20 102.4 81 63.0
Glyma.09G252532 Glycine max HOM05D008013 ORTHO05D010149 2.3e-20 102.1 80 61.2
HanXRQChr11g0333671 Helianthus annuus HOM05D008013 ORTHO05D010149 3.0e-20 101.7 81 64.2
Thecc.05G204600 Theobroma cacao HOM05D008013 ORTHO05D010149 3.0e-20 101.7 81 64.2
Glyma.18G240151 Glycine max HOM05D008013 ORTHO05D010149 5.2e-20 100.9 80 61.2
Gohir.D13G159800 Gossypium hirsutum HOM05D008013 ORTHO05D010149 6.8e-20 100.5 81 61.7
Manes.09G183801 Manihot esculenta HOM05D008013 ORTHO05D010149 6.8e-20 100.5 81 64.2
Potri.019G051850 Populus trichocarpa HOM05D008013 ORTHO05D010149 6.8e-20 100.5 80 61.2
CsaV3_5G032690 Cucumis sativus L. HOM05D008013 ORTHO05D010149 8.8e-20 100.1 81 64.2
Gohir.A13G155000 Gossypium hirsutum HOM05D008013 ORTHO05D010149 2.0e-19 99.0 81 61.7
PGR119G0441 Punica granatum HOM05D000837 ORTHO05D008386 2.0e-19 99.0 82 59.8
Hund07321 Selenicereus undatus HOM05D008013 ORTHO05D010149 2.0e-19 99.0 81 64.2
arahy.Tifrunner.gnm1.ann1.L7M8PN Arachis hypogaea HOM05D008013 ORTHO05D010149 2.6e-19 98.6 77 62.3
Nn1g08299 Nelumbo nucifera HOM05D008013 ORTHO05D010149 3.4e-19 98.2 84 61.9
TWI59G0485 Tripterygium wilfordii HOM05D008013 ORTHO05D010149 3.4e-19 98.2 80 62.5
GSVIVG01019150001 Vitis vinifera HOM05D008013 ORTHO05D010149 3.4e-19 98.2 81 66.7
Gohir.A08G224100 Gossypium hirsutum HOM05D008013 ORTHO05D010149 4.4e-19 97.8 81 60.5
Gohir.D08G244400 Gossypium hirsutum HOM05D008013 ORTHO05D010149 4.4e-19 97.8 81 60.5
Gorai.004G260700 Gossypium raimondii HOM05D008013 ORTHO05D010149 4.4e-19 97.8 81 60.5
Sed0019978 Sechium edule HOM05D008013 ORTHO05D010149 5.7e-19 97.4 81 60.5
Thhalv10026665m.g Eutrema salsugineum HOM05D008013 ORTHO05D010149 7.5e-19 97.1 82 61.0
AL7G21760 Arabidopsis lyrata HOM05D008013 ORTHO05D010149 2.8e-18 95.1 82 59.8
Phvul.008G056200 Phaseolus vulgaris HOM05D008013 ORTHO05D010149 2.8e-18 95.1 78 59.0
FAN05G0262 Fragaria x ananassa HOM05D008013 ORTHO05D010149 3.7e-18 94.7 94 57.4
Carub.0007s1021 Capsella rubella HOM05D008013 ORTHO05D010149 6.3e-18 94.0 82 59.8
A03p59800 Brassica napus HOM05D008013 ORTHO05D010149 8.3e-18 93.6 83 59.0
vmacro10397 Vaccinium macrocarpon HOM05D000837 ORTHO05D008386 1.1e-17 93.2 103 53.4
C07p57840 Brassica napus HOM05D008013 ORTHO05D010149 3.1e-17 91.7 83 57.8
BolC7t46244H Brassica oleracea HOM05D008013 ORTHO05D010149 3.1e-17 91.7 83 57.8
Sp7g28270 Schrenkiella parvula HOM05D008013 ORTHO05D010149 3.1e-17 91.7 82 57.3
EL10Ac4g09411 Beta vulgaris HOM05D008013 ORTHO05D010149 4.1e-17 91.3 76 64.5
Aa31LG2G20150 Aethionema arabicum HOM05D008013 ORTHO05D010149 5.4e-17 90.9 82 57.3
AT4G30390 Arabidopsis thaliana HOM05D008013 ORTHO05D010149 1.2e-16 89.7 78 56.4
Ah.06g195780 Amaranthus hybridus HOM05D008013 ORTHO05D010149 1.6e-16 89.4 78 65.4
ClCG10G008070 Citrullus lanatus HOM05D000837 ORTHO05D008386 1.6e-16 89.4 119 44.5
BcaNung00543 Brassica carinata HOM05D008013 ORTHO05D010149 2.7e-16 88.6 84 54.8
A08p19260 Brassica napus HOM05D008013 ORTHO05D010149 2.7e-16 88.6 82 56.1
BraA08t33887Z Brassica rapa HOM05D008013 ORTHO05D010149 2.7e-16 88.6 82 56.1
Hund21874 Selenicereus undatus HOM05D008013 ORTHO05D010149 3.5e-16 88.2 69 65.2
SHI02464 Sapria himalayana HOM05D008013 ORTHO05D010149 7.7e-16 87.0 79 58.2
BraA03t15033Z Brassica rapa HOM05D008013 ORTHO05D010149 2.3e-15 85.5 83 55.4
BcaB03g12645 Brassica carinata HOM05D008013 ORTHO05D010149 1.9e-14 82.4 90 52.2
Sabra19G0056800 Salix brachista HOM05D008013 ORTHO05D010149 5.5e-14 80.9 135 37.8
PSO170G5632 Papaver somniferum HOM05D000837 ORTHO05D008386 1.0e-12 76.6 78 47.4
PSO357G0534 Papaver somniferum HOM05D008013 ORTHO05D010149 1.4e-12 76.3 78 47.4
Pp3c1_15100 Physcomitrium patens HOM05D008013 ORTHO05D010149 7.5e-11 70.5 81 39.5
FAN09G3946 Fragaria x ananassa HOM05D000837 ORTHO05D008386 1.1e-09 66.6 53 64.2
AagrBONN_evm.TU.Sc2ySwM_228.1824 Anthoceros agrestis HOM05D008013 ORTHO05D010149 1.4e-09 66.2 81 42.0
PGSC0003DMG402023117 Solanum tuberosum HOM05D008013 ORTHO05D010149 1.8e-09 65.9 82 48.8
TAR109G0001 Trochodendron aralioides HOM05D008013 ORTHO05D010149 5.4e-09 64.3 48 66.7
Sc16g0010260 Simmondsia chinensis HOM05D008013 ORTHO05D010149 3.5e-08 61.6 47 66.0
Sed0019520 Sechium edule HOM05D008013 ORTHO05D010149 1.3e-07 59.7 44 68.2
MBI07_g00621_MAGBIO Magnolia biondii HOM05D000837 ORTHO05D008386 1.7e-07 59.3 46 67.4
SalBow3G2297 Salvia bowleyana HOM05D000837 ORTHO05D008386 5.0e-07 57.8 37 75.7
SalBow3G2750 Salvia bowleyana HOM05D000837 ORTHO05D008386 5.0e-07 57.8 37 75.7
CARHR238290 Cardamine hirsuta HOM05D008013 ORTHO05D010149 1.1e-06 56.6 43 65.1
BcaC01g01153 Brassica carinata HOM05D008013 ORTHO05D010149 1.9e-06 55.8 64 48.4
Mapoly0013s0068 Marchantia polymorpha HOM05D008013 ORTHO05D010149 2.5e-06 55.5 84 38.1


User provided reference genes

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