Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_736.g22488 Utricularia gibba HOM05D004989 ORTHO05D006335 3.4e-203 711.4 361 100.0
MSTRG.4001 Avicennia marina HOM05D004989 ORTHO05D006335 6.1e-152 541.2 359 76.3
SalBow2G0224 Salvia bowleyana HOM05D004989 ORTHO05D006335 3.1e-148 528.9 371 74.1
Migut.G00301 Erythranthe guttata HOM05D004989 ORTHO05D006335 1.6e-144 516.5 364 74.5
Peaxi162Scf00134g02033 Petunia axillaris HOM05D004989 ORTHO05D006335 2.0e-139 499.6 357 71.7
MSTRG.10011 Avicennia marina HOM05D004989 ORTHO05D006335 4.5e-139 498.4 322 79.5
Dinv38405 Davidia involucrata HOM05D004989 ORTHO05D006335 7.7e-139 497.7 357 71.4
HanXRQChr12g0359311 Helianthus annuus HOM05D004989 ORTHO05D006335 7.2e-137 491.1 356 69.9
Dinv44490 Davidia involucrata HOM05D004989 ORTHO05D006335 1.0e-135 487.3 357 69.5
ECA234G2869 Erigeron canadensis HOM05D004989 ORTHO05D006335 3.0e-135 485.7 321 74.5
CiPaw.02G093300 Carya illinoinensis HOM05D004989 ORTHO05D006335 4.0e-135 485.3 360 69.4
CSS0017868 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 6.8e-135 484.6 364 69.2
GSVIVG01017902001 Vitis vinifera HOM05D004989 ORTHO05D006335 1.5e-134 483.4 357 71.1
CSS0000312 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 3.4e-134 482.3 358 70.4
Cfa015597 Carpinus fangiana HOM05D004989 ORTHO05D006335 1.3e-133 480.3 360 69.7
FvH4_4g14760 Fragaria vesca HOM05D004989 ORTHO05D006335 3.7e-133 478.8 357 68.3
Cc03_g03230 Coffea canephora HOM05D004989 ORTHO05D006335 4.8e-133 478.4 356 69.1
MD16G1186000 Malus domestica HOM05D004989 ORTHO05D006335 1.1e-132 477.2 362 68.0
Solyc01g079860.3 Solanum lycopersicum HOM05D004989 ORTHO05D006335 1.1e-132 477.2 313 76.0
CAN.G69.27 Capsicum annuum HOM05D004989 ORTHO05D006335 3.1e-132 475.7 313 75.7
Prupe.1G152800 Prunus persica HOM05D004989 ORTHO05D006335 7.0e-132 474.6 357 68.3
RcHm_v2.0_Chr4g0417841 Rosa chinensis HOM05D004989 ORTHO05D006335 9.1e-132 474.2 357 67.2
Sopen01g031620 Solanum pennellii HOM05D004989 ORTHO05D006335 9.1e-132 474.2 313 75.4
TAR365G0616 Trochodendron aralioides HOM05D004989 ORTHO05D006335 2.0e-131 473.0 360 67.5
CANSAT78G0752 Cannabis sativa HOM05D004989 ORTHO05D006335 2.9e-130 469.2 360 67.8
VMungo1215G0587 Vigna mungo HOM05D004989 ORTHO05D006335 2.9e-130 469.2 361 67.3
Glyma.07G257800 Glycine max HOM05D004989 ORTHO05D006335 5.5e-129 464.9 360 67.5
MELO3C006557.2 Cucumis melo HOM05D004989 ORTHO05D006335 9.4e-129 464.2 358 66.2
Lj6g0002948 Lotus japonicus HOM05D004989 ORTHO05D006335 2.1e-128 463.0 359 68.0
vmacro15315 Vaccinium macrocarpon HOM05D004989 ORTHO05D006335 2.7e-128 462.6 357 68.1
arahy.Tifrunner.gnm1.ann1.L7AGGG Arachis hypogaea HOM05D004989 ORTHO05D006335 6.1e-128 461.5 372 65.9
Nitab4.5_0005927g0020 Nicotiana tabacum HOM05D004989 ORTHO05D006335 6.1e-128 461.5 382 65.7
Phvul.003G091700 Phaseolus vulgaris HOM05D004989 ORTHO05D006335 1.4e-127 460.3 319 71.2
CsaV3_3G013610 Cucumis sativus L. HOM05D004989 ORTHO05D006335 2.3e-127 459.5 358 66.5
Oeu042787.2 Olea europaea HOM05D004989 ORTHO05D006335 2.3e-127 459.5 427 60.9
Glyma.17G016200 Glycine max HOM05D004989 ORTHO05D006335 3.0e-127 459.1 355 68.2
QL06p003872 Quercus lobata HOM05D004989 ORTHO05D006335 3.0e-127 459.1 372 66.1
arahy.Tifrunner.gnm1.ann1.8A1ZYN Arachis hypogaea HOM05D004989 ORTHO05D006335 5.2e-127 458.4 372 65.6
Medtr2g022530 Medicago truncatula HOM05D004989 ORTHO05D006335 5.2e-127 458.4 358 66.2
Carub.0006s1748 Capsella rubella HOM05D004989 ORTHO05D006335 8.8e-127 457.6 359 64.9
Sed0017941 Sechium edule HOM05D004989 ORTHO05D006335 8.8e-127 457.6 358 65.9
Lalb_Chr18g0056141 Lupinus albus HOM05D004989 ORTHO05D006335 1.2e-126 457.2 357 68.1
Aa31LG11G10490 Aethionema arabicum HOM05D004989 ORTHO05D006335 2.6e-126 456.1 356 66.9
Potri.008G203600 Populus trichocarpa HOM05D004989 ORTHO05D006335 3.4e-126 455.7 355 65.9
Aqoxy3G00936 Aquilegia oxysepala HOM05D004989 ORTHO05D006335 4.4e-126 455.3 358 65.6
FAN17G0130 Fragaria x ananassa HOM05D004989 ORTHO05D006335 4.4e-126 455.3 376 63.0
Ca_00634_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 5.7e-126 454.9 368 65.5
Thecc.04G224100 Theobroma cacao HOM05D004989 ORTHO05D006335 7.5e-126 454.5 361 65.9
Thhalv10013830m.g Eutrema salsugineum HOM05D004989 ORTHO05D006335 9.8e-126 454.1 360 64.7
Sp6g25210 Schrenkiella parvula HOM05D004989 ORTHO05D006335 1.3e-125 453.8 359 64.6
CARHR193800 Cardamine hirsuta HOM05D004989 ORTHO05D006335 4.9e-125 451.8 360 65.6
Nn1g02182 Nelumbo nucifera HOM05D004989 ORTHO05D006335 4.9e-125 451.8 361 64.5
AT5G19150 Arabidopsis thaliana HOM05D004989 ORTHO05D006335 1.1e-124 450.7 359 65.2
BcaB01g04874 Brassica carinata HOM05D004989 ORTHO05D006335 1.1e-124 450.7 359 64.6
Eucgr.B01122 Eucalyptus grandis HOM05D004989 ORTHO05D006335 1.1e-124 450.7 363 63.9
PSO017G3853 Papaver somniferum HOM05D004989 ORTHO05D006335 1.4e-124 450.3 365 64.7
EL10Ac3g05973 Beta vulgaris HOM05D004989 ORTHO05D006335 4.1e-124 448.7 356 62.6
Gohir.A02G029300 Gossypium hirsutum HOM05D004989 ORTHO05D006335 4.1e-124 448.7 363 65.8
AL6G30570 Arabidopsis lyrata HOM05D004989 ORTHO05D006335 5.4e-124 448.4 359 63.8
Gorai.005G041000 Gossypium raimondii HOM05D004989 ORTHO05D006335 7.0e-124 448.0 363 65.3
PGSC0003DMG400009024 Solanum tuberosum HOM05D004989 ORTHO05D006335 7.0e-124 448.0 294 76.5
BolC3t13560H Brassica oleracea HOM05D004989 ORTHO05D006335 2.0e-123 446.4 359 63.5
RcHm_v2.0_Chr0c32g0501661 Rosa chinensis HOM05D004989 ORTHO05D006335 2.7e-123 446.0 347 67.7
Atru.chr4.2544 Acer truncatum HOM05D004989 ORTHO05D006335 5.9e-123 444.9 313 72.8
A03p09380 Brassica napus HOM05D004989 ORTHO05D006335 7.7e-123 444.5 349 65.6
Gohir.D02G037100 Gossypium hirsutum HOM05D004989 ORTHO05D006335 1.0e-122 444.1 363 64.7
BcaB01g05136 Brassica carinata HOM05D004989 ORTHO05D006335 1.3e-122 443.7 359 63.2
AUR62026218 Chenopodium quinoa HOM05D004989 ORTHO05D006335 3.8e-122 442.2 353 63.5
MBI14_g28267_MAGBIO Magnolia biondii HOM05D004989 ORTHO05D006335 6.6e-122 441.4 354 66.1
Nitab4.5_0000630g0050 Nicotiana tabacum HOM05D004989 ORTHO05D006335 6.6e-122 441.4 287 77.7
Rhsim02G0020900 Rhododendron simsii HOM05D004989 ORTHO05D006335 8.6e-122 441.0 395 60.0
Manes.03G183100 Manihot esculenta HOM05D004989 ORTHO05D006335 1.9e-121 439.9 358 65.6
PSO478G2898 Papaver somniferum HOM05D004989 ORTHO05D006335 4.3e-121 438.7 311 71.1
BraA03t10257Z Brassica rapa HOM05D004989 ORTHO05D006335 7.3e-121 438.0 372 61.0
CDE07G1289 Ceratophyllum demersum HOM05D004989 ORTHO05D006335 1.6e-120 436.8 358 64.2
C03p10950 Brassica napus HOM05D004989 ORTHO05D006335 2.8e-120 436.0 368 61.1
FAN22G1009 Fragaria x ananassa HOM05D004989 ORTHO05D006335 3.6e-120 435.6 374 61.5
Hund12013 Selenicereus undatus HOM05D004989 ORTHO05D006335 3.6e-120 435.6 317 65.6
BraA02t05485Z Brassica rapa HOM05D004989 ORTHO05D006335 8.0e-120 434.5 318 68.9
COL.COLO4_26626 Corchorus olitorius HOM05D004989 ORTHO05D006335 8.9e-119 431.0 396 59.6
Sabra08G0157900 Salix brachista HOM05D004989 ORTHO05D006335 1.2e-118 430.6 391 59.3
BcaC03g13646 Brassica carinata HOM05D004989 ORTHO05D006335 1.5e-118 430.3 316 69.0
BolC2t06940H Brassica oleracea HOM05D004989 ORTHO05D006335 1.5e-118 430.3 316 69.0
THA.LOC104818802 Tarenaya hassleriana HOM05D004989 ORTHO05D006335 1.5e-118 430.3 370 60.5
ATR0743G104 Amborella trichopoda HOM05D004989 ORTHO05D006335 2.6e-118 429.5 357 63.9
C03p10960 Brassica napus HOM05D004989 ORTHO05D006335 5.7e-118 428.3 366 61.5
A02p05270 Brassica napus HOM05D004989 ORTHO05D006335 1.3e-117 427.2 318 68.2
BcaB05g23373 Brassica carinata HOM05D004989 ORTHO05D006335 1.7e-117 426.8 318 67.6
C02p10390 Brassica napus HOM05D004989 ORTHO05D006335 1.7e-117 426.8 318 69.5
Ah.07g202120 Amaranthus hybridus HOM05D004989 ORTHO05D006335 1.4e-116 423.7 356 61.5
RcHm_v2.0_Chr0c32g0501471 Rosa chinensis HOM05D004989 ORTHO05D006335 1.4e-116 423.7 366 61.2
Os11g0276300 Oryza sativa ssp. japonica HOM05D004989 ORTHO05D006335 5.4e-116 421.8 314 65.3
HPP92_005520 Vanilla planifolia HOM05D004989 ORTHO05D006335 2.0e-115 419.9 359 62.4
Haze_00947 Corylus avellana HOM05D004989 ORTHO05D006335 3.5e-115 419.1 350 63.7
Zm00001eb168810 Zea mays HOM05D004989 ORTHO05D006335 7.8e-115 417.9 314 65.0
RcHm_v2.0_Chr3g0483801 Rosa chinensis HOM05D004989 ORTHO05D006335 6.6e-114 414.8 281 73.7
TWI73G0966 Tripterygium wilfordii HOM05D004989 ORTHO05D006335 8.6e-114 414.5 360 62.8
Actinidia36991 Actinidia chinensis HOM05D004989 ORTHO05D006335 2.1e-112 409.8 352 63.4
Ciclev10005119m.g Citrus clementina HOM05D004989 ORTHO05D006335 2.1e-112 409.8 308 67.5
Sc13g0004100 Simmondsia chinensis HOM05D004989 ORTHO05D006335 4.0e-111 405.6 296 67.6
Lj6A574T37 Lonicera japonica HOM05D004989 ORTHO05D006335 3.2e-108 396.0 250 77.6
Lj6g0017812 Lotus japonicus HOM05D004989 ORTHO05D006335 3.2e-108 396.0 320 64.1
Psat1g182800 Pisum sativum HOM05D004989 ORTHO05D006335 7.0e-108 394.8 257 75.1
Hma1.2p1_2553F.1_g324330 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 6.0e-107 391.7 254 75.6
Mapoly0063s0079 Marchantia polymorpha HOM05D004989 ORTHO05D006335 3.4e-94 349.4 317 57.1
C03p10910 Brassica napus HOM05D004989 ORTHO05D006335 9.9e-94 347.8 256 69.9
CBR_g26053 Chara braunii HOM05D004989 ORTHO05D006335 8.4e-93 344.7 330 54.5
SMO361G0104 Selaginella moellendorffii HOM05D004989 ORTHO05D006335 8.4e-93 344.7 307 58.3
SGA_v2.0_scaffold39G15320 Striga asiatica HOM05D004989 ORTHO05D006335 3.5e-91 339.3 205 81.0
SHI00391 Sapria himalayana HOM05D004989 ORTHO05D006335 7.3e-89 331.6 257 65.4
ClCG05G005360 Citrullus lanatus HOM05D004989 ORTHO05D006335 6.9e-87 325.1 243 66.7
C03p10860 Brassica napus HOM05D004989 ORTHO05D006335 4.4e-86 322.4 356 52.0
Duzib151G0886 Durio zibethinus HOM05D004989 ORTHO05D006335 8.7e-82 308.1 364 50.0
BcaB01g05294 Brassica carinata HOM05D004989 ORTHO05D006335 1.1e-81 307.8 366 49.5
PGR142G2933 Punica granatum HOM05D004989 ORTHO05D006335 1.1e-81 307.8 359 51.3
HPP92_005588 Vanilla planifolia HOM05D004989 ORTHO05D006335 9.6e-81 304.7 306 56.2
AagrBONN_evm.TU.Sc2ySwM_344.1251 Anthoceros agrestis HOM05D004989 ORTHO05D006335 6.2e-80 302.0 339 52.2
Pp3c8_1650 Physcomitrium patens HOM05D004989 ORTHO05D006335 1.3e-74 284.3 284 54.2
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 7.4e-73 278.5 176 77.3
Hma1.2p1_2553F.1_g324320 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 2.8e-72 276.6 198 71.2
FAN07G2774 Fragaria x ananassa HOM05D004989 ORTHO05D006335 4.0e-71 272.7 264 54.5
arahy.Tifrunner.gnm1.ann1.BS3LH0 Arachis hypogaea HOM05D004989 ORTHO05D006335 3.4e-70 269.6 372 45.2
Cre06.g250500 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 9.0e-63 245.0 336 39.0
Ca_00654_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 3.2e-60 236.5 198 65.2
arahy.Tifrunner.gnm1.ann1.J5ZRE9 Arachis hypogaea HOM05D004989 ORTHO05D006335 3.5e-59 233.0 187 63.1
TPR.G30683 Trifolium pratense HOM05D004989 ORTHO05D006335 3.0e-58 229.9 164 70.7
MCO05G313 Micromonas commoda HOM05D004989 ORTHO05D006335 1.9e-57 227.3 347 39.5
arahy.Tifrunner.gnm1.ann1.HR1U72 Arachis hypogaea HOM05D004989 ORTHO05D006335 7.4e-57 225.3 186 62.4
Hma1.2p1_0995F.1_g245810 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 2.1e-56 223.8 168 67.9
SEGI_35556 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 6.5e-53 212.2 200 58.5
Cpa.g.sc147.7 Carica papaya HOM05D004989 ORTHO05D006335 3.2e-52 209.9 178 61.2
PRCOL_00001617 Prasinoderma coloniale HOM05D004989 ORTHO05D006335 3.9e-50 203.0 333 38.1
Cfa024379 Carpinus fangiana HOM05D004989 ORTHO05D006335 9.7e-49 198.4 290 37.6
SEGI_07547 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 1.1e-47 194.9 171 55.6
SEGI_27897 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 1.2e-46 191.4 123 71.5
Haze_26760 Corylus avellana HOM05D004980 ORTHO05D006505 7.7e-46 188.7 263 41.4
Atru.chr4.2545 Acer truncatum HOM05D004989 ORTHO05D006335 4.2e-44 183.0 167 60.5
Cre05.g234664 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 7.2e-44 182.2 365 34.5
Hund03167 Selenicereus undatus HOM05D004989 ORTHO05D006335 5.1e-42 176.0 115 71.3
SEGI_12399 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 1.1e-33 148.3 129 60.5
Atru.chr4.2547 Acer truncatum HOM05D004989 ORTHO05D000586 1.1e-31 141.7 114 63.2
Actinidia08511 Actinidia chinensis HOM05D004989 ORTHO05D006335 1.2e-27 128.3 324 33.3
Cfa015379 Carpinus fangiana HOM05D000407 ORTHO05D002981 6.1e-27 125.9 170 44.7
Cpa.g.sc147.6 Carica papaya HOM05D004989 ORTHO05D006335 2.7e-22 110.5 69 78.3
Cpa.g.sc147.5 Carica papaya HOM05D004989 ORTHO05D006335 1.0e-21 108.6 94 61.7
TPR.G30666 Trifolium pratense HOM05D004989 ORTHO05D006335 2.3e-18 97.4 86 61.6
CBR_g19747 Chara braunii HOM05D000409 ORTHO05D000184 2.6e-17 94.0 80 58.8
AUR62026378 Chenopodium quinoa HOM05D004989 ORTHO05D006335 6.1e-11 72.8 72 50.0
FAN07G1160 Fragaria x ananassa HOM05D004989 ORTHO05D006335 8.3e-08 62.4 41 75.6


User provided reference genes

Program Settings