Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_736.g22460 Utricularia gibba HOM05D006451 ORTHO05D007680 5.1e-53 210.7 98 100.0
unitig_899.g14873 Utricularia gibba HOM05D006451 ORTHO05D007680 1.7e-08 62.8 63 52.4
Os12g0604800 Oryza sativa ssp. japonica HOM05D006451 ORTHO05D007680 8.5e-08 60.5 70 50.0
Psat6g104120 Pisum sativum HOM05D006451 ORTHO05D007680 1.5e-07 59.7 62 50.0
Sc25g0004270 Simmondsia chinensis HOM05D006451 ORTHO05D007680 2.5e-07 58.9 76 43.4
Aqoxy2G03443 Aquilegia oxysepala HOM05D006451 ORTHO05D007680 4.2e-07 58.2 51 54.9
Zm00001eb031280 Zea mays HOM05D006451 ORTHO05D007680 4.2e-07 58.2 51 54.9
ATR0665G102 Amborella trichopoda HOM05D006451 ORTHO05D007680 5.5e-07 57.8 51 54.9
MSTRG.4055 Avicennia marina HOM05D006451 ORTHO05D007680 5.5e-07 57.8 47 59.6
TAR362G1293 Trochodendron aralioides HOM05D006451 ORTHO05D007680 5.5e-07 57.8 51 52.9
Glyma.10G003800 Glycine max HOM05D006451 ORTHO05D007680 7.2e-07 57.4 51 51.0
Lalb_Chr01g0020941 Lupinus albus HOM05D006451 ORTHO05D007680 7.2e-07 57.4 51 51.0
CAN.G1402.12 Capsicum annuum HOM05D006451 ORTHO05D007680 9.4e-07 57.0 47 55.3
Cc03_g04170 Coffea canephora HOM05D006451 ORTHO05D007680 9.4e-07 57.0 47 55.3
Nn6g34139 Nelumbo nucifera HOM05D006451 ORTHO05D007680 9.4e-07 57.0 51 52.9
THA.LOC104801113 Tarenaya hassleriana HOM05D006451 ORTHO05D007680 9.4e-07 57.0 51 52.9
GSVIVG01018026001 Vitis vinifera HOM05D006451 ORTHO05D007680 9.4e-07 57.0 51 52.9
THA.LOC104826059 Tarenaya hassleriana HOM05D006451 ORTHO05D007680 1.2e-06 56.6 51 52.9
Glyma.02G004400 Glycine max HOM05D006451 ORTHO05D007680 1.6e-06 56.2 51 51.0
Lj6g0024617 Lotus japonicus HOM05D006451 ORTHO05D007680 1.6e-06 56.2 51 51.0
Cfa008457 Carpinus fangiana HOM05D006451 ORTHO05D007680 2.1e-06 55.8 51 51.0
Medtr1g041435 Medicago truncatula HOM05D006451 ORTHO05D007680 2.1e-06 55.8 51 51.0
Oeu058962.1 Olea europaea HOM05D006451 ORTHO05D007680 2.1e-06 55.8 47 55.3
vmacro15365 Vaccinium macrocarpon HOM05D006451 ORTHO05D007680 2.1e-06 55.8 47 57.4
Actinidia08470 Actinidia chinensis HOM05D006451 ORTHO05D007680 2.7e-06 55.5 47 57.4
arahy.Tifrunner.gnm1.ann1.9LTU7I Arachis hypogaea HOM05D006451 ORTHO05D007680 2.7e-06 55.5 47 53.2
arahy.Tifrunner.gnm1.ann1.D3KIH0 Arachis hypogaea HOM05D006451 ORTHO05D007680 2.7e-06 55.5 47 53.2
arahy.Tifrunner.gnm1.ann1.E7JLC4 Arachis hypogaea HOM05D006451 ORTHO05D007680 2.7e-06 55.5 47 53.2
Ciclev10005444m.g Citrus clementina HOM05D006451 ORTHO05D007680 2.7e-06 55.5 51 51.0
Dinv44567 Davidia involucrata HOM05D006451 ORTHO05D007680 2.7e-06 55.5 47 57.4
PGR004G2173 Punica granatum HOM05D006451 ORTHO05D007680 2.7e-06 55.5 46 56.5
HPP92_001912 Vanilla planifolia HOM05D006451 ORTHO05D007680 2.7e-06 55.5 51 51.0
Manes.03G174100 Manihot esculenta HOM05D006451 ORTHO05D007680 3.6e-06 55.1 47 55.3
Manes.15G032000 Manihot esculenta HOM05D006451 ORTHO05D007680 3.6e-06 55.1 47 55.3
SGA_v2.0_scaffold191G40453 Striga asiatica HOM05D006451 ORTHO05D007680 3.6e-06 55.1 46 56.5
CSS0014602 Camellia sinensis var. sinensis HOM05D006451 ORTHO05D007680 4.7e-06 54.7 47 57.4
CSS0023735 Camellia sinensis var. sinensis HOM05D006451 ORTHO05D007680 4.7e-06 54.7 47 57.4
CDE10G0543 Ceratophyllum demersum HOM05D006451 ORTHO05D007680 4.7e-06 54.7 51 49.0
Ca_12151_v3 Cicer arietinum L. HOM05D006451 ORTHO05D007680 4.7e-06 54.7 51 51.0
Potri.010G082900 Populus trichocarpa HOM05D006451 ORTHO05D007680 4.7e-06 54.7 51 52.9
Sabra08G0119100 Salix brachista HOM05D006451 ORTHO05D007680 4.7e-06 54.7 51 51.0
Sabra10G0060200 Salix brachista HOM05D006451 ORTHO05D007680 4.7e-06 54.7 51 52.9
SalBow2G3248 Salvia bowleyana HOM05D006451 ORTHO05D007680 4.7e-06 54.7 47 53.2
AL1G13790 Arabidopsis lyrata HOM05D006451 ORTHO05D007680 6.1e-06 54.3 51 51.0
AUR62043956 Chenopodium quinoa HOM05D006451 ORTHO05D007680 6.1e-06 54.3 51 49.0
Eucgr.H03421 Eucalyptus grandis HOM05D006451 ORTHO05D007680 6.1e-06 54.3 47 53.2
FvH4_4g00880 Fragaria vesca HOM05D006451 ORTHO05D007680 6.1e-06 54.3 51 51.0
FAN12G0848 Fragaria x ananassa HOM05D006451 ORTHO05D007680 6.1e-06 54.3 51 51.0
FAN22G0671 Fragaria x ananassa HOM05D006451 ORTHO05D007680 6.1e-06 54.3 51 51.0
Solyc09g082540.3 Solanum lycopersicum HOM05D006451 ORTHO05D007680 6.1e-06 54.3 47 55.3
Sopen09g031400 Solanum pennellii HOM05D006451 ORTHO05D007680 6.1e-06 54.3 47 55.3
Ah.07g204140 Amaranthus hybridus HOM05D006451 ORTHO05D007680 8.0e-06 53.9 51 47.1
AUR62034703 Chenopodium quinoa HOM05D006451 ORTHO05D007680 8.0e-06 53.9 76 38.2
Duzib151G0283 Durio zibethinus HOM05D006451 ORTHO05D007680 8.0e-06 53.9 51 51.0
Lj6A610G48 Lonicera japonica HOM05D006451 ORTHO05D007680 8.0e-06 53.9 46 58.7


User provided reference genes

Program Settings