Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_736.g22445 Utricularia gibba HOM05D003636 ORTHO05D013299 2.1e-172 609.0 316 100.0
Migut.G00443 Erythranthe guttata HOM05D003636 ORTHO05D005160 1.9e-53 213.8 313 46.6
SGA_v2.0_scaffold101G29798 Striga asiatica HOM05D003636 ORTHO05D005160 1.5e-50 204.1 321 44.5
MSTRG.4105 Avicennia marina HOM05D003636 ORTHO05D005160 1.1e-48 198.0 319 44.8
SalBow2G0018 Salvia bowleyana HOM05D003636 ORTHO05D005160 2.3e-46 190.3 346 43.6
Aqoxy2G03579 Aquilegia oxysepala HOM05D003636 ORTHO05D005160 3.0e-46 189.9 306 44.1
Ciclev10004361m.g Citrus clementina HOM05D003636 ORTHO05D005160 3.9e-46 189.5 334 42.8
Cc03_g04930 Coffea canephora HOM05D003636 ORTHO05D005160 3.9e-46 189.5 349 42.1
Peaxi162Scf00813g00221 Petunia axillaris HOM05D003636 ORTHO05D005160 1.1e-45 188.0 313 42.8
Actinidia19047 Actinidia chinensis HOM05D003636 ORTHO05D005160 4.8e-44 182.6 347 40.1
Lj2A972G23 Lonicera japonica HOM05D003636 ORTHO05D005160 1.4e-40 171.0 333 39.3
MD13G1208100 Malus domestica HOM05D003636 ORTHO05D005160 1.4e-40 171.0 356 39.9
Ah.10g037290 Amaranthus hybridus HOM05D003636 ORTHO05D005160 2.5e-40 170.2 320 41.2
Actinidia05462 Actinidia chinensis HOM05D003636 ORTHO05D005160 3.2e-40 169.9 351 39.9
TWI73G0437 Tripterygium wilfordii HOM05D003636 ORTHO05D005160 3.2e-40 169.9 334 40.7
TAR362G1191 Trochodendron aralioides HOM05D003636 ORTHO05D005160 4.2e-40 169.5 359 38.7
Hma1.2p1_1276F.1_g272050 Hydrangea macrophylla HOM05D003636 ORTHO05D005160 1.6e-39 167.5 336 39.3
Ah.09g223830 Amaranthus hybridus HOM05D003636 ORTHO05D005160 4.7e-39 166.0 321 41.4
Sopen09g032360 Solanum pennellii HOM05D003636 ORTHO05D005160 7.9e-39 165.2 315 40.3
Oeu002605.1 Olea europaea HOM05D003636 ORTHO05D005160 1.0e-38 164.9 173 53.8
CAN.G1007.10 Capsicum annuum HOM05D003636 ORTHO05D005160 3.0e-38 163.3 314 38.5
Hma1.2p1_1798F.1_g302870 Hydrangea macrophylla HOM05D003636 ORTHO05D005160 3.0e-38 163.3 343 38.8
RcHm_v2.0_Chr5g0000461 Rosa chinensis HOM05D003636 ORTHO05D005160 3.0e-38 163.3 333 38.1
Nn1g02632 Nelumbo nucifera HOM05D003636 ORTHO05D005160 5.1e-38 162.5 354 38.7
Atru.chr4.2209 Acer truncatum HOM05D003636 ORTHO05D005160 6.7e-38 162.2 337 38.3
AUR62014577 Chenopodium quinoa HOM05D003636 ORTHO05D005160 1.1e-37 161.4 256 45.7
Prupe.1G031700 Prunus persica HOM05D003636 ORTHO05D005160 1.5e-37 161.0 341 39.3
GSVIVG01018130001 Vitis vinifera HOM05D003636 ORTHO05D005160 1.5e-37 161.0 262 43.5
PGSC0003DMG400015117 Solanum tuberosum HOM05D003636 ORTHO05D005160 2.0e-37 160.6 315 39.7
Solyc09g083420.3 Solanum lycopersicum HOM05D003636 ORTHO05D005160 3.3e-37 159.8 315 39.7
Dinv44639 Davidia involucrata HOM05D003636 ORTHO05D005160 4.4e-37 159.5 333 39.3
EL10Ac2g04633 Beta vulgaris HOM05D003636 ORTHO05D005160 2.2e-36 157.1 205 48.3
vmacro15411 Vaccinium macrocarpon HOM05D003636 ORTHO05D005160 1.4e-35 154.5 166 51.8
Gorai.010G076500 Gossypium raimondii HOM05D003636 ORTHO05D005160 1.8e-35 154.1 307 41.7
AUR62039385 Chenopodium quinoa HOM05D003636 ORTHO05D005160 2.4e-35 153.7 180 52.2
Gohir.A06G066800 Gossypium hirsutum HOM05D003636 ORTHO05D005160 3.1e-35 153.3 309 41.1
Haze_11311 Corylus avellana HOM05D003636 ORTHO05D005160 4.1e-35 152.9 160 55.0
Glyma.20G126100 Glycine max HOM05D003636 ORTHO05D005160 4.1e-35 152.9 250 42.4
MD16G1209600 Malus domestica HOM05D003636 ORTHO05D005160 4.1e-35 152.9 252 44.0
QL02p053474 Quercus lobata HOM05D003636 ORTHO05D005160 4.1e-35 152.9 315 37.5
Gohir.D06G065300 Gossypium hirsutum HOM05D003636 ORTHO05D005160 9.1e-35 151.8 308 40.3
THA.LOC104801942 Tarenaya hassleriana HOM05D003636 ORTHO05D005160 9.1e-35 151.8 158 53.8
TPR.G13854 Trifolium pratense HOM05D003636 ORTHO05D005160 1.5e-34 151.0 162 54.3
VMungo0720G2747 Vigna mungo HOM05D003636 ORTHO05D005160 1.5e-34 151.0 290 40.0
COL.COLO4_15803 Corchorus olitorius HOM05D003636 ORTHO05D005160 2.6e-34 150.2 168 52.4
Nitab4.5_0000525g0280 Nicotiana tabacum HOM05D003636 ORTHO05D005160 2.6e-34 150.2 317 36.9
RcHm_v2.0_Chr4g0390791 Rosa chinensis HOM05D003636 ORTHO05D005160 3.5e-34 149.8 169 50.3
Sabra16G0282600 Salix brachista HOM05D003636 ORTHO05D005160 4.5e-34 149.4 171 53.2
Hund05016 Selenicereus undatus HOM05D003636 ORTHO05D005160 4.5e-34 149.4 217 44.7
arahy.Tifrunner.gnm1.ann1.7RJ7GD Arachis hypogaea HOM05D003636 ORTHO05D005160 1.0e-33 148.3 163 55.2
Cfa008372 Carpinus fangiana HOM05D003636 ORTHO05D005160 1.7e-33 147.5 327 37.0
CSS0023771 Camellia sinensis var. sinensis HOM05D003636 ORTHO05D005160 2.9e-33 146.7 115 65.2
Cc01_g03130 Coffea canephora HOM05D003636 ORTHO05D005160 2.9e-33 146.7 170 51.8
Os03g0740700 Oryza sativa ssp. japonica HOM05D003636 ORTHO05D005160 2.9e-33 146.7 143 55.2
Lj2g0003499 Lotus japonicus HOM05D003636 ORTHO05D005160 3.8e-33 146.4 184 50.5
CSS0010332 Camellia sinensis var. sinensis HOM05D003636 ORTHO05D005160 5.0e-33 146.0 122 63.1
Ca_11090_v3 Cicer arietinum L. HOM05D003636 ORTHO05D005160 5.0e-33 146.0 157 52.9
CSS0034908 Camellia sinensis var. sinensis HOM05D003636 ORTHO05D005160 6.5e-33 145.6 123 60.2
Lalb_Chr21g0308481 Lupinus albus HOM05D003636 ORTHO05D005160 6.5e-33 145.6 162 51.2
Manes.02G210300 Manihot esculenta HOM05D003636 ORTHO05D005160 1.1e-32 144.8 156 53.8
ATR0665G579 Amborella trichopoda HOM05D003636 ORTHO05D005160 1.5e-32 144.4 156 52.6
Lj5g0001808 Lotus japonicus HOM05D003636 ORTHO05D005160 1.5e-32 144.4 168 51.8
Glyma.10G264200 Glycine max HOM05D003636 ORTHO05D005160 1.9e-32 144.1 248 41.9
Phvul.007G037800 Phaseolus vulgaris HOM05D003636 ORTHO05D005160 1.9e-32 144.1 151 53.0
Thecc.04G247000 Theobroma cacao HOM05D003636 ORTHO05D005160 1.9e-32 144.1 327 38.8
arahy.Tifrunner.gnm1.ann1.T9EQBK Arachis hypogaea HOM05D003636 ORTHO05D005160 2.5e-32 143.7 347 38.9
CSS0030608 Camellia sinensis var. sinensis HOM05D003636 ORTHO05D005160 3.2e-32 143.3 121 63.6
CDE06G0563 Ceratophyllum demersum HOM05D003636 ORTHO05D005160 4.2e-32 142.9 203 44.3
CSS0043760 Camellia sinensis var. sinensis HOM05D003636 ORTHO05D005160 5.5e-32 142.5 171 50.3
TAR633G2776 Trochodendron aralioides HOM05D003636 ORTHO05D013299 2.1e-31 140.6 125 60.0
HPP92_018389 Vanilla planifolia HOM05D003636 ORTHO05D013299 2.7e-31 140.2 281 37.7
FvH4_4g02820 Fragaria vesca HOM05D003636 ORTHO05D005160 3.6e-31 139.8 330 36.7
MBI11_g20311_MAGBIO Magnolia biondii HOM05D003636 ORTHO05D005160 4.7e-31 139.4 366 34.4
AL1G65900 Arabidopsis lyrata HOM05D003636 ORTHO05D005160 6.1e-31 139.0 158 52.5
Nitab4.5_0001418g0070 Nicotiana tabacum HOM05D003636 ORTHO05D005160 6.1e-31 139.0 315 36.2
Carub.0002s0788 Capsella rubella HOM05D003636 ORTHO05D005160 8.0e-31 138.7 216 44.4
Haze_11308 Corylus avellana HOM05D003636 ORTHO05D005160 1.8e-30 137.5 244 42.6
Zm00001eb056720 Zea mays HOM05D003636 ORTHO05D005160 1.8e-30 137.5 143 51.0
Medtr1g107575 Medicago truncatula HOM05D003636 ORTHO05D005160 2.3e-30 137.1 307 38.4
Psat0s986g0040 Pisum sativum HOM05D003636 ORTHO05D005160 2.3e-30 137.1 173 48.6
CARHR289840 Cardamine hirsuta HOM05D003636 ORTHO05D005160 4.0e-30 136.3 164 49.4
DCAR_024229 Daucus carota HOM05D003636 ORTHO05D005160 6.7e-30 135.6 283 41.7
FAN17G1850 Fragaria x ananassa HOM05D003636 ORTHO05D005160 6.7e-30 135.6 330 37.0
Eucgr.G02714 Eucalyptus grandis HOM05D003636 ORTHO05D005160 1.5e-29 134.4 242 40.1
Thhalv10023321m.g Eutrema salsugineum HOM05D003636 ORTHO05D005160 1.5e-29 134.4 157 50.3
PSO017G1763 Papaver somniferum HOM05D003636 ORTHO05D005160 2.0e-29 134.0 215 43.7
PSO170G0718 Papaver somniferum HOM05D003636 ORTHO05D005160 2.0e-29 134.0 215 43.3
HanXRQChr06g0181471 Helianthus annuus HOM05D003636 ORTHO05D005160 3.3e-29 133.3 146 54.8
BcaB07g31117 Brassica carinata HOM05D003636 ORTHO05D005160 5.7e-29 132.5 203 41.9
Lsat_1_v5_gn_5_72980 Lactuca sativa HOM05D003636 ORTHO05D005160 7.4e-29 132.1 303 38.9
AT1G56290 Arabidopsis thaliana HOM05D003636 ORTHO05D005160 9.7e-29 131.7 229 40.6
Aa31LG2G11570 Aethionema arabicum HOM05D003636 ORTHO05D005160 1.3e-28 131.3 223 39.9
AUR62031665 Chenopodium quinoa HOM05D003636 ORTHO05D013299 1.7e-28 131.0 101 66.3
Sc13g0005100 Simmondsia chinensis HOM05D003636 ORTHO05D005160 1.7e-28 131.0 334 36.2
Potri.001G415900 Populus trichocarpa HOM05D003636 ORTHO05D005160 2.2e-28 130.6 304 39.1
AUR62025056 Chenopodium quinoa HOM05D003636 ORTHO05D013299 3.7e-28 129.8 101 65.3
ATR0691G029 Amborella trichopoda HOM05D003636 ORTHO05D026550 8.2e-28 128.6 138 52.9
AUR62032924 Chenopodium quinoa HOM05D003636 ORTHO05D013299 8.2e-28 128.6 101 66.3
MELO3C015028.2 Cucumis melo HOM05D003636 ORTHO05D005160 1.1e-27 128.3 312 36.5
BcaC04g22040 Brassica carinata HOM05D003636 ORTHO05D005160 1.8e-27 127.5 161 47.2
C09p24190 Brassica napus HOM05D003636 ORTHO05D005160 2.4e-27 127.1 155 49.0
ECA233G4087 Erigeron canadensis HOM05D003636 ORTHO05D005160 2.4e-27 127.1 278 38.1
Sed0019602 Sechium edule HOM05D003636 ORTHO05D005160 3.1e-27 126.7 326 34.7
CiPaw.02G115900 Carya illinoinensis HOM05D003636 ORTHO05D005160 4.1e-27 126.3 304 37.5
CANSAT11G0466 Cannabis sativa HOM05D003636 ORTHO05D005160 9.1e-27 125.2 311 35.4
PGR142G0130 Punica granatum HOM05D003636 ORTHO05D005160 2.6e-26 123.6 316 33.9
CsaV3_5G014730 Cucumis sativus L. HOM05D003636 ORTHO05D005160 3.8e-25 119.8 286 35.7
Psat2g188720 Pisum sativum HOM05D003636 ORTHO05D005160 1.5e-24 117.9 121 54.5
SEGI_36314 Sequoiadendron giganteum HOM05D003636 ORTHO05D005160 1.9e-24 117.5 125 52.0
ClCG09G021970 Citrullus lanatus HOM05D003636 ORTHO05D005160 1.6e-23 114.4 333 31.5
A09p19180 Brassica napus HOM05D003636 ORTHO05D005160 3.6e-23 113.2 251 34.3
Duzib138G1962 Durio zibethinus HOM05D003636 ORTHO05D005160 6.8e-22 109.0 113 54.0
Pp3c6_28790 Physcomitrium patens HOM05D003636 ORTHO05D005160 8.8e-22 108.6 124 50.8
Rhsim02G0033400 Rhododendron simsii HOM05D003636 ORTHO05D005160 3.4e-21 106.7 171 42.7
Mapoly0080s0020 Marchantia polymorpha HOM05D003636 ORTHO05D005160 7.5e-21 105.5 166 42.2
RhsimUnG0026900 Rhododendron simsii HOM05D003636 ORTHO05D013299 2.2e-17 94.0 87 57.5
VMungo0331G1464 Vigna mungo HOM05D003636 ORTHO05D013299 1.5e-16 91.3 127 46.5
SMO356G0642 Selaginella moellendorffii HOM05D003636 ORTHO05D005160 1.6e-15 87.8 121 43.0
Ciclev10004498m.g Citrus clementina HOM05D003636 ORTHO05D005160 1.0e-14 85.1 297 32.0
arahy.Tifrunner.gnm1.ann1.6T7UPN Arachis hypogaea HOM05D003636 ORTHO05D005832 1.5e-13 81.3 64 65.6
CARHR172220 Cardamine hirsuta HOM05D003636 ORTHO05D005160 4.4e-13 79.7 68 60.3
RhsimUnG0174100 Rhododendron simsii HOM05D003636 ORTHO05D013299 2.2e-12 77.4 59 66.1
CBR_g41119 Chara braunii HOM05D003636 ORTHO05D005160 2.0e-10 70.9 301 28.6
Rhsim03G0241700 Rhododendron simsii HOM05D003636 ORTHO05D013299 2.0e-10 70.9 87 50.6
Cre17.g741550 Chlamydomonas reinhardtii HOM05D003636 ORTHO05D005160 2.7e-10 70.5 69 53.6


User provided reference genes

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