Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_736.g22427 Utricularia gibba HOM05D002855 ORTHO05D004406 2.4e-184 648.7 319 100.0
unitig_899.g14902 Utricularia gibba HOM05D002855 ORTHO05D004406 2.4e-152 542.3 322 85.4
MSTRG.18613 Avicennia marina HOM05D002855 ORTHO05D004406 3.5e-127 458.8 327 74.9
Cc01_g11990 Coffea canephora HOM05D002855 ORTHO05D004406 1.5e-122 443.4 328 70.7
Oeu041006.2 Olea europaea HOM05D002855 ORTHO05D004406 2.9e-121 439.1 264 82.2
Dinv18704 Davidia involucrata HOM05D002855 ORTHO05D004406 3.8e-121 438.7 264 83.0
QL01p035172 Quercus lobata HOM05D002855 ORTHO05D004406 1.6e-119 433.3 326 70.2
SalBow3G0437 Salvia bowleyana HOM05D002855 ORTHO05D004406 1.6e-119 433.3 323 71.2
Thecc.09G332800 Theobroma cacao HOM05D002855 ORTHO05D004406 2.1e-119 433.0 328 69.5
Migut.D02157 Erythranthe guttata HOM05D002855 ORTHO05D004406 7.8e-119 431.0 324 72.8
Rhsim01G0223400 Rhododendron simsii HOM05D002855 ORTHO05D004406 7.8e-119 431.0 325 69.5
COL.COLO4_18410 Corchorus olitorius HOM05D002855 ORTHO05D004406 1.3e-118 430.3 326 69.9
Cfa011411 Carpinus fangiana HOM05D002855 ORTHO05D004406 1.7e-118 429.9 265 80.8
Gohir.D05G099500 Gossypium hirsutum HOM05D002855 ORTHO05D004406 2.3e-118 429.5 314 72.0
Hma1.2p1_0746F.1_g212280 Hydrangea macrophylla HOM05D002855 ORTHO05D004406 3.0e-118 429.1 327 68.2
Haze_23986 Corylus avellana HOM05D002855 ORTHO05D004406 5.1e-118 428.3 265 80.4
Haze_23987 Corylus avellana HOM05D002855 ORTHO05D004406 5.1e-118 428.3 265 80.4
Duzib170G0969 Durio zibethinus HOM05D002855 ORTHO05D004406 6.6e-118 427.9 328 68.3
Gorai.009G103400 Gossypium raimondii HOM05D002855 ORTHO05D004406 8.7e-118 427.6 314 71.7
RcHm_v2.0_Chr5g0062031 Rosa chinensis HOM05D002855 ORTHO05D004406 8.7e-118 427.6 328 69.8
vmacro14496 Vaccinium macrocarpon HOM05D002855 ORTHO05D004406 1.1e-117 427.2 326 68.4
Gohir.A05G099600 Gossypium hirsutum HOM05D002855 ORTHO05D004406 1.5e-117 426.8 319 70.5
MD03G1106200 Malus domestica HOM05D002855 ORTHO05D004406 1.5e-117 426.8 317 69.7
CiPaw.13G102800 Carya illinoinensis HOM05D002855 ORTHO05D004406 1.9e-117 426.4 331 68.0
Lj3g0004926 Lotus japonicus HOM05D002855 ORTHO05D004406 1.9e-117 426.4 328 69.5
Dinv32829 Davidia involucrata HOM05D002855 ORTHO05D004406 3.3e-117 425.6 264 80.3
Eucgr.B02434 Eucalyptus grandis HOM05D002855 ORTHO05D004406 4.3e-117 425.2 325 68.0
Prupe.6G088700 Prunus persica HOM05D002855 ORTHO05D004406 4.3e-117 425.2 319 70.2
Duzib168G0993 Durio zibethinus HOM05D002855 ORTHO05D004406 7.3e-117 424.5 318 70.8
Cpa.g.sc139.9 Carica papaya HOM05D002855 ORTHO05D004406 9.6e-117 424.1 264 80.7
Ciclev10027686m.g Citrus clementina HOM05D002855 ORTHO05D004406 2.1e-116 422.9 318 68.2
Sopen11g030480 Solanum pennellii HOM05D002855 ORTHO05D004406 2.1e-116 422.9 277 77.6
MD11G1118300 Malus domestica HOM05D002855 ORTHO05D004406 2.8e-116 422.5 323 68.4
CANSAT54G2256 Cannabis sativa HOM05D002855 ORTHO05D004406 6.2e-116 421.4 325 68.6
CiPaw.13G103000 Carya illinoinensis HOM05D002855 ORTHO05D004406 6.2e-116 421.4 331 66.2
PGSC0003DMG400015522 Solanum tuberosum HOM05D002855 ORTHO05D004406 8.1e-116 421.0 277 77.3
CAN.G84.3 Capsicum annuum HOM05D002855 ORTHO05D004406 1.1e-115 420.6 277 77.3
Solyc11g072810.2 Solanum lycopersicum HOM05D002855 ORTHO05D004406 1.1e-115 420.6 277 77.3
Ca_01364_v3 Cicer arietinum L. HOM05D002855 ORTHO05D004406 1.4e-115 420.2 277 76.9
Nitab4.5_0002380g0080 Nicotiana tabacum HOM05D002855 ORTHO05D004406 1.4e-115 420.2 328 68.6
Nitab4.5_0003784g0030 Nicotiana tabacum HOM05D002855 ORTHO05D004406 2.4e-115 419.5 328 68.6
Medtr2g096000 Medicago truncatula HOM05D002855 ORTHO05D004406 6.9e-115 417.9 261 79.3
Manes.04G028200 Manihot esculenta HOM05D002855 ORTHO05D004406 2.0e-114 416.4 264 78.4
Atru.chr3.3777 Acer truncatum HOM05D002855 ORTHO05D004406 2.6e-114 416.0 319 68.3
CsaV3_6G022000 Cucumis sativus L. HOM05D002855 ORTHO05D004406 3.4e-114 415.6 324 68.5
Manes.11G137500 Manihot esculenta HOM05D002855 ORTHO05D004406 3.4e-114 415.6 328 66.8
Sc12g0001880 Simmondsia chinensis HOM05D002855 ORTHO05D004406 3.4e-114 415.6 324 67.9
Peaxi162Scf00836g00219 Petunia axillaris HOM05D002855 ORTHO05D004406 1.3e-113 413.7 253 81.4
Gohir.D03G131800 Gossypium hirsutum HOM05D002855 ORTHO05D004406 1.7e-113 413.3 322 67.7
TAR369G1034 Trochodendron aralioides HOM05D002855 ORTHO05D004406 2.2e-113 412.9 331 65.3
Lalb_Chr22g0350071 Lupinus albus HOM05D002855 ORTHO05D004406 2.9e-113 412.5 264 78.8
Gohir.A03G036400 Gossypium hirsutum HOM05D002855 ORTHO05D004406 4.9e-113 411.8 320 67.8
Gorai.003G138700 Gossypium raimondii HOM05D002855 ORTHO05D004406 4.9e-113 411.8 322 67.7
PGR102G1726 Punica granatum HOM05D002855 ORTHO05D004406 4.9e-113 411.8 339 64.3
Hma1.2p1_0035F.1_g021730 Hydrangea macrophylla HOM05D002855 ORTHO05D004406 1.1e-112 410.6 316 68.4
Potri.009G026100 Populus trichocarpa HOM05D002855 ORTHO05D004406 1.4e-112 410.2 323 67.2
FAN21G1667 Fragaria x ananassa HOM05D002855 ORTHO05D004406 3.2e-112 409.1 326 67.5
Lalb_Chr22g0350101 Lupinus albus HOM05D002855 ORTHO05D004406 3.2e-112 409.1 264 78.0
THA.LOC104810821 Tarenaya hassleriana HOM05D002855 ORTHO05D004406 5.4e-112 408.3 312 69.6
ClCG02G020560 Citrullus lanatus HOM05D002855 ORTHO05D004406 1.2e-111 407.1 329 66.0
FAN16G1875 Fragaria x ananassa HOM05D002855 ORTHO05D004406 1.2e-111 407.1 326 67.2
TAR623G1741 Trochodendron aralioides HOM05D002855 ORTHO05D004406 1.2e-111 407.1 270 75.2
FvH4_3g34430 Fragaria vesca HOM05D002855 ORTHO05D004406 1.6e-111 406.8 326 67.2
FAN11G1910 Fragaria x ananassa HOM05D002855 ORTHO05D004406 2.1e-111 406.4 326 67.2
Lsat_1_v5_gn_5_166940 Lactuca sativa HOM05D002855 ORTHO05D004406 2.1e-111 406.4 275 75.6
TAR633G1422 Trochodendron aralioides HOM05D002855 ORTHO05D004406 2.7e-111 406.0 261 77.4
FAN25G2944 Fragaria x ananassa HOM05D002855 ORTHO05D004406 4.6e-111 405.2 326 66.9
Nn2g10571 Nelumbo nucifera HOM05D002855 ORTHO05D004406 4.6e-111 405.2 272 74.6
Rhsim01G0216000 Rhododendron simsii HOM05D002855 ORTHO05D004406 6.0e-111 404.8 276 73.9
MELO3C025710.2 Cucumis melo HOM05D002855 ORTHO05D004406 2.3e-110 402.9 322 66.8
Sabra16G0140100 Salix brachista HOM05D002855 ORTHO05D004406 3.0e-110 402.5 323 65.9
Gorai.004G002400 Gossypium raimondii HOM05D002855 ORTHO05D004406 3.9e-110 402.1 313 69.6
Sed0021885 Sechium edule HOM05D002855 ORTHO05D004406 3.9e-110 402.1 326 65.0
AUR62001859 Chenopodium quinoa HOM05D002855 ORTHO05D004406 5.1e-110 401.7 313 68.7
Gohir.D08G009200 Gossypium hirsutum HOM05D002855 ORTHO05D004406 6.6e-110 401.4 313 69.6
EL10Ac7g15933 Beta vulgaris HOM05D002855 ORTHO05D004406 8.7e-110 401.0 261 77.4
arahy.Tifrunner.gnm1.ann1.R78DWG Arachis hypogaea HOM05D002855 ORTHO05D004406 1.5e-109 400.2 324 66.4
arahy.Tifrunner.gnm1.ann1.3PXT9K Arachis hypogaea HOM05D002855 ORTHO05D004406 1.9e-109 399.8 324 66.4
Potri.001G233800 Populus trichocarpa HOM05D002855 ORTHO05D004406 1.9e-109 399.8 325 66.2
AUR62009654 Chenopodium quinoa HOM05D002855 ORTHO05D004406 5.6e-109 398.3 286 71.7
Migut.N02644 Erythranthe guttata HOM05D002855 ORTHO05D004406 5.6e-109 398.3 269 74.3
Hund18948 Selenicereus undatus HOM05D002855 ORTHO05D004406 5.6e-109 398.3 310 68.1
Gohir.A08G000105 Gossypium hirsutum HOM05D002855 ORTHO05D004406 1.6e-108 396.7 313 68.1
Glyma.15G043500 Glycine max HOM05D002855 ORTHO05D004406 4.8e-108 395.2 266 76.7
AL5G24520 Arabidopsis lyrata HOM05D002855 ORTHO05D004406 6.2e-108 394.8 298 70.1
ATR0594G221 Amborella trichopoda HOM05D002855 ORTHO05D004406 1.1e-107 394.0 267 72.7
Sabra09G0017300 Salix brachista HOM05D002855 ORTHO05D004406 2.4e-107 392.9 260 76.9
VMungo1080G0735 Vigna mungo HOM05D002855 ORTHO05D004406 4.0e-107 392.1 337 64.4
DCAR_018861 Daucus carota HOM05D002855 ORTHO05D004406 6.9e-107 391.3 263 74.1
Psat5g281800 Pisum sativum HOM05D002855 ORTHO05D004406 6.9e-107 391.3 261 76.2
Phvul.L002003 Phaseolus vulgaris HOM05D002855 ORTHO05D004406 9.0e-107 391.0 329 65.3
Carub.0005s1167 Capsella rubella HOM05D002855 ORTHO05D004406 1.2e-106 390.6 330 64.5
DCAR_018860 Daucus carota HOM05D002855 ORTHO05D004406 1.5e-106 390.2 272 72.1
AT3G45830 Arabidopsis thaliana HOM05D002855 ORTHO05D004406 2.0e-106 389.8 314 67.2
SGA_v2.0_scaffold194G40747 Striga asiatica HOM05D002855 ORTHO05D004406 3.4e-106 389.0 226 84.1
Aqoxy4G03112 Aquilegia oxysepala HOM05D002855 ORTHO05D004406 4.5e-106 388.7 237 80.6
MBI14_g42162_MAGBIO Magnolia biondii HOM05D002855 ORTHO05D004406 5.8e-106 388.3 334 62.9
Thhalv10002373m.g Eutrema salsugineum HOM05D002855 ORTHO05D004406 6.4e-105 384.8 263 76.0
CARHR154140 Cardamine hirsuta HOM05D002855 ORTHO05D004406 1.1e-104 384.0 315 67.3
PSO384G0780 Papaver somniferum HOM05D002855 ORTHO05D004406 1.1e-104 384.0 251 75.3
Nn2g12814 Nelumbo nucifera HOM05D002855 ORTHO05D004406 1.4e-104 383.6 216 84.7
TWI75G0055 Tripterygium wilfordii HOM05D002855 ORTHO05D004406 1.4e-104 383.6 328 64.3
C03p70400 Brassica napus HOM05D002855 ORTHO05D004406 1.9e-104 383.3 250 77.6
BraA06t25210Z Brassica rapa HOM05D002855 ORTHO05D004406 4.2e-104 382.1 250 77.6
HPP92_000643 Vanilla planifolia HOM05D002855 ORTHO05D004406 7.1e-104 381.3 227 81.5
HPP92_001698 Vanilla planifolia HOM05D002855 ORTHO05D004406 9.3e-104 380.9 227 81.5
BolC3t19280H Brassica oleracea HOM05D002855 ORTHO05D004406 1.2e-103 380.6 286 69.6
SHI05981 Sapria himalayana HOM05D002855 ORTHO05D004406 1.2e-103 380.6 262 72.5
CDE02G2912 Ceratophyllum demersum HOM05D002855 ORTHO05D004406 2.1e-103 379.8 268 72.8
BcaB01g01053 Brassica carinata HOM05D002855 ORTHO05D004406 3.5e-103 379.0 327 63.3
TPR.G11598 Trifolium pratense HOM05D002855 ORTHO05D004406 3.5e-103 379.0 280 71.1
Glyma.13G330500 Glycine max HOM05D002855 ORTHO05D004406 1.0e-102 377.5 237 79.3
BcaC01g01947 Brassica carinata HOM05D002855 ORTHO05D004406 1.3e-102 377.1 286 69.2
TWI79G0463 Tripterygium wilfordii HOM05D002855 ORTHO05D004406 2.5e-101 372.9 267 73.0
MBI05_g19645_MAGBIO Magnolia biondii HOM05D002855 ORTHO05D004406 2.8e-100 369.4 276 69.9
ECA248G3817 Erigeron canadensis HOM05D002855 ORTHO05D004406 5.3e-99 365.2 258 72.9
Ah.08g215040 Amaranthus hybridus HOM05D002855 ORTHO05D004406 1.2e-98 364.0 316 63.3
THA.LOC104814856 Tarenaya hassleriana HOM05D002855 ORTHO05D004406 1.0e-97 360.9 204 86.3
Pp3c17_22910 Physcomitrium patens HOM05D002855 ORTHO05D004406 4.9e-97 358.6 227 75.8
HanXRQChr04g0110371 Helianthus annuus HOM05D002855 ORTHO05D004406 1.4e-96 357.1 284 66.2
Mapoly0002s0042 Marchantia polymorpha HOM05D002855 ORTHO05D004406 1.3e-94 350.5 223 74.9
Actinidia00807 Actinidia chinensis HOM05D002855 ORTHO05D004406 3.9e-94 349.0 264 68.9
HanXRQChr14g0429221 Helianthus annuus HOM05D002855 ORTHO05D004406 8.2e-92 341.3 200 82.5
SEGI_18775 Sequoiadendron giganteum HOM05D002855 ORTHO05D004406 2.4e-91 339.7 203 80.3
Sp5g15700 Schrenkiella parvula HOM05D002855 ORTHO05D004406 2.6e-90 336.3 279 64.9
CSS0016445 Camellia sinensis var. sinensis HOM05D002855 ORTHO05D004406 5.8e-90 335.1 216 73.1
Os05g0117864 Oryza sativa ssp. japonica HOM05D002855 ORTHO05D004406 1.1e-88 330.9 263 65.4
Zm00001eb265670 Zea mays HOM05D002855 ORTHO05D004406 2.5e-88 329.7 231 69.7
Zm00001eb355300 Zea mays HOM05D002855 ORTHO05D004406 1.6e-87 327.0 231 69.7
AagrBONN_evm.TU.Sc2ySwM_228.4027 Anthoceros agrestis HOM05D002855 ORTHO05D004406 2.7e-87 326.2 228 69.3
Actinidia14088 Actinidia chinensis HOM05D002855 ORTHO05D004406 3.5e-87 325.9 227 69.2
Pp3c14_23790 Physcomitrium patens HOM05D002855 ORTHO05D004406 3.5e-87 325.9 246 65.4
GSVIVG01025574001 Vitis vinifera HOM05D002855 ORTHO05D009676 1.2e-82 310.8 222 67.1
PSO832G3558 Papaver somniferum HOM05D002855 ORTHO05D004406 2.6e-82 309.7 227 68.3
Nitab4.5_0011917g0020 Nicotiana tabacum HOM05D002855 ORTHO05D004406 1.8e-78 297.0 223 64.6
RhsimUnG0121200 Rhododendron simsii HOM05D002855 ORTHO05D004406 1.5e-77 293.9 214 65.0
Ciclev10011193m.g Citrus clementina HOM05D002855 ORTHO05D004406 4.3e-77 292.4 210 64.3
Peaxi162Scf00472g00082 Petunia axillaris HOM05D002855 ORTHO05D004406 4.3e-77 292.4 219 64.4
Duzib128G1501 Durio zibethinus HOM05D002855 ORTHO05D004406 1.7e-76 290.4 219 62.1
CBR_g17672 Chara braunii HOM05D002855 ORTHO05D004406 4.8e-76 288.9 222 64.0
Thecc.05G049900 Theobroma cacao HOM05D002855 ORTHO05D004406 2.4e-75 286.6 219 60.7
Nitab4.5_0000202g0400 Nicotiana tabacum HOM05D002855 ORTHO05D004406 5.3e-75 285.4 219 63.9
Actinidia37270 Actinidia chinensis HOM05D002855 ORTHO05D004406 2.2e-73 280.0 167 80.2
COL.COLO4_10308 Corchorus olitorius HOM05D002855 ORTHO05D004406 1.4e-72 277.3 219 60.7
CSS0021829 Camellia sinensis var. sinensis HOM05D002855 ORTHO05D004406 7.9e-71 271.6 155 83.2
Cc06_g03300 Coffea canephora HOM05D002855 ORTHO05D004406 5.1e-70 268.9 219 58.4
Atru.chr8.2509 Acer truncatum HOM05D002855 ORTHO05D004406 1.1e-69 267.7 225 56.0
Lj2P104T63 Lonicera japonica HOM05D002855 ORTHO05D004406 3.3e-69 266.2 224 58.5
Sc01g0003750 Simmondsia chinensis HOM05D002855 ORTHO05D004406 2.2e-68 263.5 218 58.7
Actinidia07087 Actinidia chinensis HOM05D002855 ORTHO05D004406 1.8e-67 260.4 214 65.4
Prupe.6G245300 Prunus persica HOM05D002855 ORTHO05D004406 2.1e-63 246.9 186 62.9
AUR62042292 Chenopodium quinoa HOM05D002855 ORTHO05D009012 3.0e-62 243.0 212 55.7
AUR62043938 Chenopodium quinoa HOM05D002855 ORTHO05D004406 3.0e-62 243.0 212 55.7
RcHm_v2.0_Chr3g0468071 Rosa chinensis HOM05D000001 ORTHO05D009676 6.3e-60 235.3 215 54.0
FvH4_6g14850 Fragaria vesca HOM05D002855 ORTHO05D004406 2.7e-58 229.9 215 50.7
FAN14G4413 Fragaria x ananassa HOM05D002855 ORTHO05D009012 1.3e-57 227.6 215 50.2
SMO118G0514 Selaginella moellendorffii HOM05D002855 ORTHO05D004406 2.9e-57 226.5 157 68.2
FvH4_6g14860 Fragaria vesca HOM05D002855 ORTHO05D035540 9.8e-53 211.5 196 55.1
Sopen10g033910 Solanum pennellii HOM05D002855 ORTHO05D004406 2.8e-52 209.9 168 58.3
Sopen06g015690 Solanum pennellii HOM05D002855 ORTHO05D004406 5.4e-51 205.7 168 56.5
PGSC0003DMG402010988 Solanum tuberosum HOM05D002855 ORTHO05D004406 1.2e-50 204.5 168 57.1
Sopen06g015720 Solanum pennellii HOM05D002855 ORTHO05D004406 2.0e-50 203.8 164 57.3
FAN09G2794 Fragaria x ananassa HOM05D002855 ORTHO05D035540 5.9e-50 202.2 195 52.8
Sopen10g033890 Solanum pennellii HOM05D002855 ORTHO05D004406 6.5e-49 198.7 168 56.0
Sopen10g033920 Solanum pennellii HOM05D002855 ORTHO05D004406 6.5e-49 198.7 168 56.0
CDE09G0123 Ceratophyllum demersum HOM05D002855 ORTHO05D004406 2.5e-48 196.8 262 46.6
Actinidia03767 Actinidia chinensis HOM05D002855 ORTHO05D004406 2.7e-47 193.4 235 51.9
FAN09G4588 Fragaria x ananassa HOM05D000001 ORTHO05D009676 5.2e-46 189.1 208 45.2
Sopen06g015700 Solanum pennellii HOM05D002855 ORTHO05D004406 6.8e-46 188.7 166 54.8
Dinv37233 Davidia involucrata HOM05D002855 ORTHO05D004406 8.8e-46 188.3 107 82.2
Sopen10g033900 Solanum pennellii HOM05D002855 ORTHO05D004406 1.6e-42 177.6 140 58.6
Sopen06g015670 Solanum pennellii HOM05D002855 ORTHO05D004406 1.1e-40 171.4 143 56.6
Sopen06g015680 Solanum pennellii HOM05D002855 ORTHO05D004406 1.1e-40 171.4 143 56.6
Gorai.001G248600 Gossypium raimondii HOM05D002855 ORTHO05D004406 2.5e-40 170.2 216 44.0
Gohir.D13G096325 Gossypium hirsutum HOM05D002855 ORTHO05D004406 6.8e-38 162.2 211 43.1
Lj2E1045T0 Lonicera japonica HOM05D002855 ORTHO05D004406 9.8e-37 158.3 186 52.2
vmacro20088 Vaccinium macrocarpon HOM05D002855 ORTHO05D004406 2.8e-31 140.2 225 40.9
FAN05G2826 Fragaria x ananassa HOM05D000001 ORTHO05D009676 7.8e-18 95.5 208 28.8
Lj3P975T65 Lonicera japonica HOM05D002855 ORTHO05D029235 2.1e-10 70.9 69 55.1
A06p21220 Brassica napus HOM05D002855 ORTHO05D004406 3.5e-10 70.1 42 78.6
Hma1.2p1_0111F.1_g053510 Hydrangea macrophylla HOM05D002855 ORTHO05D029235 6.6e-09 65.9 47 68.1
FAN05G4048 Fragaria x ananassa HOM05D002855 ORTHO05D035540 1.2e-07 61.6 68 47.1
Dinv37234 Davidia involucrata HOM05D002855 ORTHO05D029235 6.8e-06 55.8 35 68.6


User provided reference genes

Program Settings