Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_736.g22401 Utricularia gibba HOM05D000875 ORTHO05D000684 2.6e-101 372.1 190 100.0
unitig_899.g14963 Utricularia gibba HOM05D000875 ORTHO05D000684 2.7e-42 176.0 154 66.9
unitig_747.g21972 Utricularia gibba HOM05D000875 ORTHO05D000684 8.7e-25 117.9 103 63.1
Glyma.12G178300 Glycine max HOM05D000875 ORTHO05D000684 3.8e-20 102.4 195 38.5
Oeu000600.1 Olea europaea HOM05D000875 ORTHO05D000684 5.0e-20 102.1 218 34.9
Ca_01708_v3 Cicer arietinum L. HOM05D000875 ORTHO05D000684 6.5e-20 101.7 173 42.2
Medtr2g084275 Medicago truncatula HOM05D000875 ORTHO05D000684 2.5e-19 99.8 184 40.2
MSTRG.17760 Avicennia marina HOM05D000875 ORTHO05D000684 4.2e-19 99.0 200 40.5
Oeu008359.1 Olea europaea HOM05D000875 ORTHO05D000684 5.5e-19 98.6 218 36.7
Cpa.g.sc476.3 Carica papaya HOM05D000875 ORTHO05D000684 7.2e-19 98.2 152 42.1
TWI79G0879 Tripterygium wilfordii HOM05D000875 ORTHO05D000684 7.2e-19 98.2 151 43.7
Oeu008358.1 Olea europaea HOM05D000875 ORTHO05D000684 1.2e-18 97.4 218 36.7
Actinidia03693 Actinidia chinensis HOM05D000875 ORTHO05D000684 1.6e-18 97.1 204 38.7
Peaxi162Scf00983g00415 Petunia axillaris HOM05D000875 ORTHO05D000684 4.6e-18 95.5 144 44.4
Psat5g253440 Pisum sativum HOM05D000875 ORTHO05D000684 4.6e-18 95.5 199 37.7
CiPaw.13G123100 Carya illinoinensis HOM05D000875 ORTHO05D000684 7.9e-18 94.7 197 40.1
Solyc11g066380.3 Solanum lycopersicum HOM05D000875 ORTHO05D000684 7.9e-18 94.7 144 45.1
Sopen11g026130 Solanum pennellii HOM05D000875 ORTHO05D000684 7.9e-18 94.7 144 45.1
PGSC0003DMG400000416 Solanum tuberosum HOM05D000875 ORTHO05D000684 7.9e-18 94.7 144 45.1
Aqoxy2G01668 Aquilegia oxysepala HOM05D000875 ORTHO05D000684 1.0e-17 94.4 116 46.6
TWI75G1353 Tripterygium wilfordii HOM05D000875 ORTHO05D000684 1.0e-17 94.4 140 45.0
CSS0044092 Camellia sinensis var. sinensis HOM05D000875 ORTHO05D000684 1.4e-17 94.0 146 41.8
CSS0045254 Camellia sinensis var. sinensis HOM05D000875 ORTHO05D000684 1.4e-17 94.0 146 41.8
Dinv29377 Davidia involucrata HOM05D000875 ORTHO05D000684 1.4e-17 94.0 181 39.8
TPR.G21027 Trifolium pratense HOM05D000875 ORTHO05D000684 1.4e-17 94.0 187 38.5
vmacro14394 Vaccinium macrocarpon HOM05D000875 ORTHO05D000684 1.4e-17 94.0 146 45.2
MELO3C026950.2 Cucumis melo HOM05D000875 ORTHO05D000684 1.8e-17 93.6 143 44.8
CsaV3_6G014330 Cucumis sativus L. HOM05D000875 ORTHO05D000684 1.8e-17 93.6 143 44.8
Gohir.D03G139400 Gossypium hirsutum HOM05D000875 ORTHO05D000684 2.3e-17 93.2 203 38.4
Migut.N02545 Erythranthe guttata HOM05D000875 ORTHO05D000684 3.0e-17 92.8 146 43.8
Gorai.003G146100 Gossypium raimondii HOM05D000875 ORTHO05D000684 3.9e-17 92.4 179 39.7
ClCG02G021560 Citrullus lanatus HOM05D000875 ORTHO05D000684 5.1e-17 92.0 213 37.1
Manes.04G013400 Manihot esculenta HOM05D000875 ORTHO05D000684 5.1e-17 92.0 146 41.1
Sabra09G0003100 Salix brachista HOM05D000875 ORTHO05D000684 5.1e-17 92.0 197 39.1
Sp4g10960 Schrenkiella parvula HOM05D000875 ORTHO05D000684 5.1e-17 92.0 154 39.6
TWI31G0905 Tripterygium wilfordii HOM05D000875 ORTHO05D000684 5.1e-17 92.0 190 36.8
Duzib150G0456 Durio zibethinus HOM05D000875 ORTHO05D000684 6.7e-17 91.7 146 42.5
Gohir.A03G029200 Gossypium hirsutum HOM05D000875 ORTHO05D000684 6.7e-17 91.7 197 39.1
MD00G1165800 Malus domestica HOM05D000875 ORTHO05D000684 6.7e-17 91.7 197 38.1
MD03G1127100 Malus domestica HOM05D000875 ORTHO05D000684 6.7e-17 91.7 197 38.1
Oeu007311.1 Olea europaea HOM05D000875 ORTHO05D000684 6.7e-17 91.7 220 35.9
Sed0017622 Sechium edule HOM05D000875 ORTHO05D000684 6.7e-17 91.7 200 38.0
MD11G1147800 Malus domestica HOM05D000875 ORTHO05D000684 8.8e-17 91.3 204 36.3
AT2G28150 Arabidopsis thaliana HOM05D000875 ORTHO05D000684 1.1e-16 90.9 193 36.3
CAN.G546.48 Capsicum annuum HOM05D000875 ORTHO05D000684 1.1e-16 90.9 144 43.1
unitig_746.g26621 Utricularia gibba HOM05D000875 ORTHO05D000684 1.1e-16 90.9 179 40.2
Aa31LG5G7990 Aethionema arabicum HOM05D000875 ORTHO05D000684 1.5e-16 90.5 188 37.2
Phvul.005G130600 Phaseolus vulgaris HOM05D000875 ORTHO05D000684 1.5e-16 90.5 181 36.5
AUR62029174 Chenopodium quinoa HOM05D000875 ORTHO05D000684 2.0e-16 90.1 191 37.7
Ca_19319_v3 Cicer arietinum L. HOM05D000875 ORTHO05D000684 2.0e-16 90.1 184 40.2
Dinv16218 Davidia involucrata HOM05D000875 ORTHO05D000684 2.0e-16 90.1 181 38.1
Lalb_Chr01g0004581 Lupinus albus HOM05D000875 ORTHO05D000684 2.0e-16 90.1 140 42.1
Nn6g35235 Nelumbo nucifera HOM05D000875 ORTHO05D000684 2.0e-16 90.1 180 39.4
COL.COLO4_11103 Corchorus olitorius HOM05D000875 ORTHO05D000684 2.5e-16 89.7 146 42.5
Duzib170G1168 Durio zibethinus HOM05D000875 ORTHO05D000684 2.5e-16 89.7 200 38.5
FAN21G1138 Fragaria x ananassa HOM05D000875 ORTHO05D000684 2.5e-16 89.7 198 37.9
Glyma.11G193000 Glycine max HOM05D000875 ORTHO05D000684 2.5e-16 89.7 142 42.3
Lalb_Chr19g0136931 Lupinus albus HOM05D000875 ORTHO05D000684 2.5e-16 89.7 145 40.7
Nitab4.5_0028110g0010 Nicotiana tabacum HOM05D000875 ORTHO05D000684 2.5e-16 89.7 187 39.0
Eucgr.J00387 Eucalyptus grandis HOM05D000875 ORTHO05D000684 3.3e-16 89.4 189 37.0
Glyma.13G322200 Glycine max HOM05D000875 ORTHO05D000684 3.3e-16 89.4 181 38.1
Nitab4.5_0004414g0030 Nicotiana tabacum HOM05D000875 ORTHO05D000684 3.3e-16 89.4 187 39.0
arahy.Tifrunner.gnm1.ann1.9K9ZRS Arachis hypogaea HOM05D000875 ORTHO05D000684 4.3e-16 89.0 162 41.4
Carub.0004s0897 Capsella rubella HOM05D000875 ORTHO05D000684 4.3e-16 89.0 154 38.3
Thhalv10016498m.g Eutrema salsugineum HOM05D000875 ORTHO05D000684 4.3e-16 89.0 153 39.9
Lalb_Chr24g0394921 Lupinus albus HOM05D000875 ORTHO05D000684 4.3e-16 89.0 181 37.0
RcHm_v2.0_Chr5g0056921 Rosa chinensis HOM05D000875 ORTHO05D000684 4.3e-16 89.0 146 40.4
AL4G22000 Arabidopsis lyrata HOM05D000875 ORTHO05D000684 5.7e-16 88.6 144 40.3
Lj1A211T42 Lonicera japonica HOM05D000875 ORTHO05D000684 5.7e-16 88.6 129 46.5
Lj2A1008T37 Lonicera japonica HOM05D000875 ORTHO05D000684 5.7e-16 88.6 145 42.8
Nn2g13840 Nelumbo nucifera HOM05D000875 ORTHO05D000684 5.7e-16 88.6 181 38.7
Phvul.005G069000 Phaseolus vulgaris HOM05D000875 ORTHO05D000684 7.4e-16 88.2 192 39.1
Potri.009G005800 Populus trichocarpa HOM05D000875 ORTHO05D000684 7.4e-16 88.2 196 37.8
arahy.Tifrunner.gnm1.ann1.00K3B7 Arachis hypogaea HOM05D000875 ORTHO05D000684 9.7e-16 87.8 162 40.7
DCAR_015507 Daucus carota HOM05D000875 ORTHO05D000684 9.7e-16 87.8 179 38.5
QL01p015125 Quercus lobata HOM05D000875 ORTHO05D000684 9.7e-16 87.8 197 37.6
QL01p015218 Quercus lobata HOM05D000875 ORTHO05D000684 9.7e-16 87.8 197 37.6
Atru.chr3.3522 Acer truncatum HOM05D000875 ORTHO05D000684 1.3e-15 87.4 120 45.8
Cfa010295 Carpinus fangiana HOM05D000875 ORTHO05D000684 1.3e-15 87.4 153 41.2
Lj3g0002642 Lotus japonicus HOM05D000875 ORTHO05D000684 1.3e-15 87.4 220 35.5
Lalb_Chr22g0350401 Lupinus albus HOM05D000875 ORTHO05D000684 1.3e-15 87.4 146 40.4
Manes.11G152200 Manihot esculenta HOM05D000875 ORTHO05D000684 1.7e-15 87.0 198 36.4
VMungo1127G1254 Vigna mungo HOM05D000875 ORTHO05D000684 1.7e-15 87.0 192 39.1
A07p18690 Brassica napus HOM05D000875 ORTHO05D000684 2.8e-15 86.3 198 36.9
AUR62014960 Chenopodium quinoa HOM05D000875 ORTHO05D000684 2.8e-15 86.3 191 36.6
Haze_23711 Corylus avellana HOM05D000875 ORTHO05D000684 2.8e-15 86.3 153 41.2
TAR623G0289 Trochodendron aralioides HOM05D000875 ORTHO05D000684 2.8e-15 86.3 145 42.1
BraA07t29580Z Brassica rapa HOM05D000875 ORTHO05D000684 3.7e-15 85.9 198 36.9
PGR119G1829 Punica granatum HOM05D000875 ORTHO05D000684 3.7e-15 85.9 146 40.4
BcaB02g10152 Brassica carinata HOM05D000875 ORTHO05D000684 4.8e-15 85.5 192 37.0
Ciclev10028190m.g Citrus clementina HOM05D000875 ORTHO05D000684 4.8e-15 85.5 172 37.2
FvH4_3g30680 Fragaria vesca HOM05D000875 ORTHO05D000684 4.8e-15 85.5 172 39.0
FAN11G1500 Fragaria x ananassa HOM05D000875 ORTHO05D000684 4.8e-15 85.5 172 39.0
Hma1.2p1_0051F.1_g029430 Hydrangea macrophylla HOM05D000875 ORTHO05D000684 4.8e-15 85.5 194 39.2
Thecc.09G350900 Theobroma cacao HOM05D000875 ORTHO05D000684 4.8e-15 85.5 146 39.7
Psat7g191240 Pisum sativum HOM05D000875 ORTHO05D000684 6.3e-15 85.1 222 34.2
Potri.004G216200 Populus trichocarpa HOM05D000875 ORTHO05D000684 6.3e-15 85.1 197 36.0
THA.LOC104800576 Tarenaya hassleriana HOM05D000875 ORTHO05D000684 6.3e-15 85.1 182 36.3
FAN16G0875 Fragaria x ananassa HOM05D000875 ORTHO05D000684 8.2e-15 84.7 198 36.4
Medtr4g057330 Medicago truncatula HOM05D000875 ORTHO05D000684 8.2e-15 84.7 173 40.5
Prupe.6G112400 Prunus persica HOM05D000875 ORTHO05D000684 1.1e-14 84.3 151 40.4
BcaC02g10949 Brassica carinata HOM05D000875 ORTHO05D000684 1.4e-14 84.0 197 36.0
C04p23360 Brassica napus HOM05D000875 ORTHO05D000684 1.4e-14 84.0 197 36.0
CSS0010484 Camellia sinensis var. sinensis HOM05D000875 ORTHO05D000684 1.4e-14 84.0 221 31.2
CARHR121000 Cardamine hirsuta HOM05D000875 ORTHO05D000684 1.4e-14 84.0 158 39.2
Rhsim01G0211000 Rhododendron simsii HOM05D000875 ORTHO05D000684 1.4e-14 84.0 197 37.1
Lsat_1_v5_gn_6_43200 Lactuca sativa HOM05D000875 ORTHO05D000684 1.8e-14 83.6 196 36.2
Lj3g0028131 Lotus japonicus HOM05D000875 ORTHO05D000684 2.4e-14 83.2 219 34.7
FAN25G2615 Fragaria x ananassa HOM05D000875 ORTHO05D000684 3.1e-14 82.8 198 35.9
Duzib168G0123 Durio zibethinus HOM05D000875 ORTHO05D000684 4.1e-14 82.4 197 38.1
Lj3g0006705 Lotus japonicus HOM05D000875 ORTHO05D000684 4.1e-14 82.4 164 37.8
SGA_v2.0_scaffold50G18608 Striga asiatica HOM05D000875 ORTHO05D000684 4.1e-14 82.4 165 38.2
arahy.Tifrunner.gnm1.ann1.62L8X5 Arachis hypogaea HOM05D000875 ORTHO05D000684 5.3e-14 82.0 179 36.9
Sabra04G0147100 Salix brachista HOM05D000875 ORTHO05D000684 6.9e-14 81.6 128 41.4
Glyma.12G081000 Glycine max HOM05D000875 ORTHO05D000684 9.1e-14 81.3 179 36.9
Gohir.A08G201000 Gossypium hirsutum HOM05D000875 ORTHO05D000684 9.1e-14 81.3 146 42.5
arahy.Tifrunner.gnm1.ann1.KRI533 Arachis hypogaea HOM05D000875 ORTHO05D000684 1.5e-13 80.5 140 40.7
MSTRG.18700 Avicennia marina HOM05D000875 ORTHO05D000684 1.5e-13 80.5 146 38.4
BolC4t23838H Brassica oleracea HOM05D000875 ORTHO05D000684 1.5e-13 80.5 197 35.5
HPP92_025961 Vanilla planifolia HOM05D000875 ORTHO05D000684 1.5e-13 80.5 184 35.3
EL10Ac9g22614 Beta vulgaris HOM05D000875 ORTHO05D000684 2.6e-13 79.7 191 35.6
unitig_22.g6653 Utricularia gibba HOM05D000875 ORTHO05D000684 2.6e-13 79.7 171 37.4
unitig_27.g25047 Utricularia gibba HOM05D000875 ORTHO05D000684 3.4e-13 79.3 183 36.1
PSO339G6584 Papaver somniferum HOM05D000875 ORTHO05D000684 4.5e-13 79.0 201 36.3
TPR.G28209 Trifolium pratense HOM05D000875 ORTHO05D000684 4.5e-13 79.0 221 34.8
ECA233G0178 Erigeron canadensis HOM05D000875 ORTHO05D000684 5.9e-13 78.6 181 37.6
CANSAT25G2534 Cannabis sativa HOM05D000875 ORTHO05D000684 7.7e-13 78.2 148 39.2
PSO801G0239 Papaver somniferum HOM05D000875 ORTHO05D000684 7.7e-13 78.2 177 37.3
Os08g0561600 Oryza sativa ssp. japonica HOM05D000875 ORTHO05D000684 1.0e-12 77.8 124 41.1
HanXRQChr02g0055531 Helianthus annuus HOM05D000875 ORTHO05D000684 1.7e-12 77.0 136 39.7
Cc01_g10330 Coffea canephora HOM05D000875 ORTHO05D000684 2.2e-12 76.6 197 34.5
Gohir.D08G218200 Gossypium hirsutum HOM05D000875 ORTHO05D000684 2.2e-12 76.6 197 38.6
Gorai.004G232000 Gossypium raimondii HOM05D000875 ORTHO05D000684 2.2e-12 76.6 197 38.6
THA.LOC104816072 Tarenaya hassleriana HOM05D000875 ORTHO05D000684 3.8e-12 75.9 150 37.3
Sc06g0010810 Simmondsia chinensis HOM05D000875 ORTHO05D000684 8.5e-12 74.7 196 34.7
HanXRQChr13g0396271 Helianthus annuus HOM05D000875 ORTHO05D000684 1.4e-11 73.9 185 36.8
Zm00001eb039020 Zea mays HOM05D000875 ORTHO05D000684 5.5e-11 72.0 144 38.9
Zm00001eb175850 Zea mays HOM05D000875 ORTHO05D000684 5.5e-11 72.0 139 38.8
Os03g0692400 Oryza sativa ssp. japonica HOM05D000875 ORTHO05D000684 7.2e-11 71.6 147 35.4
CDE03G0238 Ceratophyllum demersum HOM05D000875 ORTHO05D000684 9.4e-11 71.2 133 38.3
Peaxi162Scf00365g00021 Petunia axillaris HOM05D000875 ORTHO05D000684 1.0e-09 67.8 147 37.4
Hund01426 Selenicereus undatus HOM05D000875 ORTHO05D000684 3.0e-09 66.2 181 33.1
unitig_699.g19187 Utricularia gibba HOM05D000875 ORTHO05D000684 1.5e-08 63.9 150 37.3
CDE06G1880 Ceratophyllum demersum HOM05D000875 ORTHO05D000684 4.4e-08 62.4 73 45.2
TAR369G1022 Trochodendron aralioides HOM05D000875 ORTHO05D000684 7.4e-08 61.6 203 31.5
CDE06G1645 Ceratophyllum demersum HOM05D000875 ORTHO05D000939 4.8e-07 58.9 137 32.1
Zm00001eb053610 Zea mays HOM05D000875 ORTHO05D000684 8.2e-07 58.2 149 34.9
SalBow6G5923 Salvia bowleyana HOM05D000875 ORTHO05D000684 1.8e-06 57.0 115 37.4
Nitab4.5_0001634g0040 Nicotiana tabacum HOM05D000875 ORTHO05D000684 9.1e-06 54.7 131 33.6
Solyc06g030470.4 Solanum lycopersicum HOM05D000875 ORTHO05D000684 9.1e-06 54.7 161 29.8


User provided reference genes

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