Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_736.g22394 Utricularia gibba HOM05D005386 ORTHO05D006981 5.6e-178 627.5 312 100.0
MSTRG.18771 Avicennia marina HOM05D005386 ORTHO05D006981 5.4e-80 302.0 341 50.4
Migut.D02364 Erythranthe guttata HOM05D005386 ORTHO05D006981 4.3e-77 292.4 338 49.7
Nitab4.5_0000731g0080 Nicotiana tabacum HOM05D005386 ORTHO05D006981 3.6e-76 289.3 241 61.0
Nitab4.5_0008177g0060 Nicotiana tabacum HOM05D005386 ORTHO05D006981 3.6e-76 289.3 241 61.0
Peaxi162Scf00224g00218 Petunia axillaris HOM05D005386 ORTHO05D006981 3.0e-75 286.2 241 61.4
Cc01_g08820 Coffea canephora HOM05D005386 ORTHO05D006981 4.4e-74 282.3 269 55.8
Dinv08924 Davidia involucrata HOM05D005386 ORTHO05D006981 4.1e-72 275.8 276 54.7
Lj1A257T31 Lonicera japonica HOM05D005386 ORTHO05D006981 3.5e-71 272.7 279 54.1
DCAR_022894 Daucus carota HOM05D005386 ORTHO05D006981 1.0e-70 271.2 264 55.7
Sopen11g027400 Solanum pennellii HOM05D005386 ORTHO05D006981 1.3e-70 270.8 261 55.6
TAR633G0448 Trochodendron aralioides HOM05D005386 ORTHO05D006981 1.3e-70 270.8 269 54.6
Solyc11g068680.2 Solanum lycopersicum HOM05D005386 ORTHO05D006981 2.3e-70 270.0 261 55.6
GSVIVG01036080001 Vitis vinifera HOM05D005386 ORTHO05D006981 2.5e-69 266.5 261 55.2
CSS0011344 Camellia sinensis var. sinensis HOM05D005386 ORTHO05D006981 7.3e-69 265.0 259 55.2
CSS0028109 Camellia sinensis var. sinensis HOM05D005386 ORTHO05D006981 7.3e-69 265.0 259 55.2
Gorai.009G084000 Gossypium raimondii HOM05D005386 ORTHO05D006981 3.6e-68 262.7 264 54.9
Gohir.D05G082400 Gossypium hirsutum HOM05D005386 ORTHO05D006981 8.0e-68 261.5 264 54.5
Potri.009G160500 Populus trichocarpa HOM05D005386 ORTHO05D006981 8.0e-68 261.5 264 52.7
Eucgr.J00523 Eucalyptus grandis HOM05D005386 ORTHO05D006981 8.9e-67 258.1 263 52.1
Gohir.A05G079500 Gossypium hirsutum HOM05D005386 ORTHO05D006981 1.2e-66 257.7 264 54.2
COL.COLO4_34005 Corchorus olitorius HOM05D005386 ORTHO05D006981 2.0e-66 256.9 263 53.6
PSO339G6531 Papaver somniferum HOM05D005386 ORTHO05D006981 2.0e-66 256.9 259 53.7
Prupe.6G135900 Prunus persica HOM05D005386 ORTHO05D006981 3.4e-66 256.1 264 53.0
Lsat_1_v5_gn_2_3840 Lactuca sativa HOM05D005386 ORTHO05D006981 9.8e-66 254.6 264 51.9
Sed0024067 Sechium edule HOM05D005386 ORTHO05D006981 9.8e-66 254.6 265 53.6
QL01p011847 Quercus lobata HOM05D005386 ORTHO05D006981 1.3e-65 254.2 278 51.4
Hma1.2p1_0319F.1_g123920 Hydrangea macrophylla HOM05D005386 ORTHO05D006981 2.9e-65 253.1 280 51.1
Sc06g0008690 Simmondsia chinensis HOM05D005386 ORTHO05D006981 2.9e-65 253.1 272 54.0
Ciclev10028837m.g Citrus clementina HOM05D005386 ORTHO05D006981 3.7e-65 252.7 274 50.4
CDE08G0019 Ceratophyllum demersum HOM05D005386 ORTHO05D006981 8.3e-65 251.5 236 53.8
Duzib168G0172 Durio zibethinus HOM05D005386 ORTHO05D006981 8.3e-65 251.5 262 51.1
MD03G1149900 Malus domestica HOM05D005386 ORTHO05D006981 1.4e-64 250.8 265 54.0
Manes.04G001400 Manihot esculenta HOM05D005386 ORTHO05D006981 2.4e-64 250.0 260 51.9
THA.LOC104810925 Tarenaya hassleriana HOM05D005386 ORTHO05D006981 5.4e-64 248.8 270 49.6
CiPaw.14G098000 Carya illinoinensis HOM05D005386 ORTHO05D006981 7.0e-64 248.4 278 51.1
PSO384G1357 Papaver somniferum HOM05D005386 ORTHO05D006981 7.0e-64 248.4 272 50.7
Nn7g37254 Nelumbo nucifera HOM05D005386 ORTHO05D006981 9.2e-64 248.1 266 50.4
Glyma.11G181300 Glycine max HOM05D005386 ORTHO05D006981 1.2e-63 247.7 264 52.3
CANSAT54G1533 Cannabis sativa HOM05D005386 ORTHO05D006981 1.6e-63 247.3 273 49.8
Cfa009987 Carpinus fangiana HOM05D005386 ORTHO05D006981 1.6e-63 247.3 262 51.1
ClCG01G011810 Citrullus lanatus HOM05D005386 ORTHO05D006981 1.6e-63 247.3 265 51.7
Haze_23346 Corylus avellana HOM05D005386 ORTHO05D006981 2.0e-63 246.9 268 50.7
ATR0307G012 Amborella trichopoda HOM05D005386 ORTHO05D006981 2.7e-63 246.5 260 51.5
EL10Ac9g22916 Beta vulgaris HOM05D005386 ORTHO05D006981 2.7e-63 246.5 261 53.3
ECA238G0234 Erigeron canadensis HOM05D005386 ORTHO05D006981 2.7e-63 246.5 266 49.6
Atru.chr3.3168 Acer truncatum HOM05D005386 ORTHO05D006981 4.6e-63 245.7 264 49.6
CsaV3_1G015030 Cucumis sativus L. HOM05D005386 ORTHO05D006981 6.0e-63 245.4 304 46.1
Thhalv10014124m.g Eutrema salsugineum HOM05D005386 ORTHO05D006981 6.0e-63 245.4 266 50.0
Sp6g22900 Schrenkiella parvula HOM05D005386 ORTHO05D006981 1.0e-62 244.6 265 50.2
RcHm_v2.0_Chr5g0045261 Rosa chinensis HOM05D005386 ORTHO05D006981 2.3e-62 243.4 262 51.1
AT5G22340 Arabidopsis thaliana HOM05D005386 ORTHO05D006981 3.9e-62 242.7 267 49.8
Lalb_Chr03g0028241 Lupinus albus HOM05D005386 ORTHO05D006981 5.0e-62 242.3 261 49.8
A03p10700 Brassica napus HOM05D005386 ORTHO05D006981 6.6e-62 241.9 264 51.9
Carub.0006s2008 Capsella rubella HOM05D005386 ORTHO05D006981 6.6e-62 241.9 269 49.8
Ca_19443_v3 Cicer arietinum L. HOM05D005386 ORTHO05D006981 6.6e-62 241.9 266 51.5
FvH4_2g14080 Fragaria vesca HOM05D005386 ORTHO05D006981 1.9e-61 240.4 265 50.2
Duzib170G0830 Durio zibethinus HOM05D005386 ORTHO05D006981 2.5e-61 240.0 252 52.4
Rhsim01G0203700 Rhododendron simsii HOM05D005386 ORTHO05D006981 2.5e-61 240.0 248 51.6
AL6G33360 Arabidopsis lyrata HOM05D005386 ORTHO05D006981 4.3e-61 239.2 268 48.9
BolC3t13704H Brassica oleracea HOM05D005386 ORTHO05D006981 4.3e-61 239.2 266 51.5
TWI31G0673 Tripterygium wilfordii HOM05D005386 ORTHO05D006981 4.3e-61 239.2 259 51.4
Lj3g0020097 Lotus japonicus HOM05D005386 ORTHO05D006981 5.6e-61 238.8 309 46.0
BraA03t10382Z Brassica rapa HOM05D005386 ORTHO05D006981 7.3e-61 238.4 266 51.5
MBI19_g34002_MAGBIO Magnolia biondii HOM05D005386 ORTHO05D006981 9.5e-61 238.0 260 51.9
Oeu014472.1 Olea europaea HOM05D005386 ORTHO05D006981 9.5e-61 238.0 157 75.8
C03p12310 Brassica napus HOM05D005386 ORTHO05D006981 1.6e-60 237.3 266 51.1
SGA_v2.0_scaffold7G04001 Striga asiatica HOM05D005386 ORTHO05D006981 2.1e-60 236.9 342 44.7
TPR.G17201 Trifolium pratense HOM05D005386 ORTHO05D006981 1.8e-59 233.8 261 51.0
arahy.Tifrunner.gnm1.ann1.E6G7P2 Arachis hypogaea HOM05D005386 ORTHO05D006981 2.3e-59 233.4 262 48.5
Psat7g187240 Pisum sativum HOM05D005386 ORTHO05D006981 2.3e-59 233.4 261 49.4
vmacro14339 Vaccinium macrocarpon HOM05D005386 ORTHO05D006981 2.3e-59 233.4 338 42.3
Ah.01g001670 Amaranthus hybridus HOM05D005386 ORTHO05D006981 1.2e-58 231.1 252 52.0
Glyma.12G091900 Glycine max HOM05D005386 ORTHO05D006981 1.2e-58 231.1 250 50.0
HanXRQChr06g0183931 Helianthus annuus HOM05D005386 ORTHO05D006981 3.4e-58 229.6 263 49.8
Zm00001eb285540 Zea mays HOM05D005386 ORTHO05D006981 8.3e-57 224.9 233 50.2
Aqoxy1G00008 Aquilegia oxysepala HOM05D005386 ORTHO05D006981 3.2e-56 223.0 190 58.4
Zm00001eb395560 Zea mays HOM05D005386 ORTHO05D006981 3.2e-56 223.0 264 46.2
Os03g0322600 Oryza sativa ssp. japonica HOM05D005386 ORTHO05D006981 3.0e-54 216.5 263 46.8
Actinidia37072 Actinidia chinensis HOM05D005386 ORTHO05D006981 1.1e-53 214.5 257 47.5
Medtr4g052500 Medicago truncatula HOM05D005386 ORTHO05D006981 1.9e-53 213.8 256 46.9
FAN20G2771 Fragaria x ananassa HOM05D005386 ORTHO05D006981 3.6e-52 209.5 280 44.6
BcaB01g04714 Brassica carinata HOM05D005386 ORTHO05D006981 6.8e-51 205.3 268 46.6
Zm00001eb015340 Zea mays HOM05D005386 ORTHO05D006981 8.9e-51 204.9 179 58.1
SEGI_27763 Sequoiadendron giganteum HOM05D005386 ORTHO05D006981 1.5e-50 204.1 259 44.4
PGR119G1266 Punica granatum HOM05D005386 ORTHO05D006981 2.6e-50 203.4 225 49.3
Cpa.g.sc195.24 Carica papaya HOM05D005386 ORTHO05D006981 7.6e-50 201.8 154 66.2
Hma1.2p1_0319F.1_g123910 Hydrangea macrophylla HOM05D005386 ORTHO05D006981 6.4e-49 198.7 154 64.9
HPP92_001703 Vanilla planifolia HOM05D005386 ORTHO05D006981 3.2e-48 196.4 269 42.0
Hund18776 Selenicereus undatus HOM05D005386 ORTHO05D006981 5.4e-48 195.7 368 37.8
MELO3C025590.2 Cucumis melo HOM05D005386 ORTHO05D006981 7.1e-48 195.3 274 43.8
arahy.Tifrunner.gnm1.ann1.PADK5G Arachis hypogaea HOM05D005386 ORTHO05D006981 1.1e-45 188.0 262 42.0
AUR62014970 Chenopodium quinoa HOM05D005386 ORTHO05D006981 7.3e-45 185.3 235 47.2
BcaC01g06587 Brassica carinata HOM05D005386 ORTHO05D006981 1.8e-43 180.6 283 42.0
Mapoly0094s0013 Marchantia polymorpha HOM05D005386 ORTHO05D006981 2.4e-43 180.3 258 41.1
AUR62015198 Chenopodium quinoa HOM05D005386 ORTHO05D006981 2.0e-42 177.2 244 44.3
AUR62017661 Chenopodium quinoa HOM05D005386 ORTHO05D006981 1.7e-41 174.1 244 43.9
SalBow6G0611 Salvia bowleyana HOM05D005386 ORTHO05D006981 3.2e-40 169.9 286 40.9
FAN15G3687 Fragaria x ananassa HOM05D005386 ORTHO05D006981 1.6e-39 167.5 131 65.6
FAN24G0713 Fragaria x ananassa HOM05D005386 ORTHO05D006981 1.7e-38 164.1 176 52.8
Pp3c20_23100 Physcomitrium patens HOM05D005386 ORTHO05D006981 9.6e-37 158.3 179 48.0
AagrBONN_evm.TU.Sc2ySwM_228.4159 Anthoceros agrestis HOM05D005386 ORTHO05D006981 4.6e-31 139.4 185 42.2
BcaC01g06590 Brassica carinata HOM05D005386 ORTHO05D006981 3.0e-30 136.7 199 42.7
Phvul.011G096200 Phaseolus vulgaris HOM05D005386 ORTHO05D006981 1.9e-29 134.0 175 43.4
SMO338G0026 Selaginella moellendorffii HOM05D005386 ORTHO05D006981 3.3e-29 133.3 179 41.9
Ciclev10029637m.g Citrus clementina HOM05D005386 ORTHO05D006981 7.4e-29 132.1 101 65.3
Aa31LG1G13200 Aethionema arabicum HOM05D005386 ORTHO05D006981 4.8e-28 129.4 185 41.1
Ciclev10029895m.g Citrus clementina HOM05D005386 ORTHO05D006981 2.6e-26 123.6 101 63.4
Aa31LG1G13190 Aethionema arabicum HOM05D005386 ORTHO05D006981 9.9e-26 121.7 87 66.7
AUR62043809 Chenopodium quinoa HOM05D004271 ORTHO05D006011 2.2e-25 120.6 140 50.7
SMO140G0002 Selaginella moellendorffii HOM05D005386 ORTHO05D006981 3.2e-24 116.7 338 29.3
FvH4_2g10370 Fragaria vesca HOM05D005386 ORTHO05D006981 1.8e-22 110.9 131 48.1
TAR633G2192 Trochodendron aralioides HOM05D005386 ORTHO05D006981 1.3e-20 104.8 144 44.4
VMungo1127G1152 Vigna mungo HOM05D005386 ORTHO05D006981 1.6e-20 104.4 90 58.9
arahy.Tifrunner.gnm1.ann1.M18R9V Arachis hypogaea HOM05D005386 ORTHO05D006981 6.2e-20 102.4 110 50.0
VMungo1127G0965 Vigna mungo HOM05D005386 ORTHO05D006981 1.5e-13 81.3 153 35.3
arahy.Tifrunner.gnm1.ann1.XDN0DP Arachis hypogaea HOM05D005386 ORTHO05D006981 2.8e-12 77.0 73 53.4
arahy.Tifrunner.gnm1.ann1.J76LRM Arachis hypogaea HOM05D005386 ORTHO05D006981 2.6e-10 70.5 83 49.4
AagrBONN_evm.TU.Sc2ySwM_228.3020 Anthoceros agrestis HOM05D006699 ORTHO05D008399 3.4e-10 70.1 169 29.0
Thecc.09G278700 Theobroma cacao HOM05D005386 ORTHO05D006981 1.0e-09 68.6 123 34.1
arahy.Tifrunner.gnm1.ann1.TQJ2IB Arachis hypogaea HOM05D005386 ORTHO05D006981 1.4e-08 64.7 83 47.0
CBR_g22416 Chara braunii HOM05D005386 ORTHO05D006981 7.2e-08 62.4 90 35.6
MD09G1069600 Malus domestica HOM05D005386 ORTHO05D006981 1.3e-06 58.2 98 40.8
FAN09G4348 Fragaria x ananassa HOM05D006699 ORTHO05D008399 8.7e-06 55.5 172 25.6


User provided reference genes

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