Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_736.g22389 Utricularia gibba HOM05D004652 ORTHO05D005634 8.8e-201 703.4 345 100.0
Migut.H00415 Erythranthe guttata HOM05D004652 ORTHO05D005634 1.3e-143 513.5 343 69.4
MSTRG.23735 Avicennia marina HOM05D004652 ORTHO05D005634 6.4e-143 511.1 345 71.9
Sopen02g037740 Solanum pennellii HOM05D004652 ORTHO05D005634 2.7e-141 505.8 345 69.3
Nitab4.5_0001221g0030 Nicotiana tabacum HOM05D004652 ORTHO05D005634 3.5e-141 505.4 345 68.4
Solyc02g093170.4 Solanum lycopersicum HOM05D004652 ORTHO05D005634 4.6e-141 505.0 346 69.1
Dinv30009 Davidia involucrata HOM05D004652 ORTHO05D005634 7.9e-141 504.2 346 70.8
Cc07_g06170 Coffea canephora HOM05D004652 ORTHO05D005634 1.0e-140 503.8 345 69.9
Nn5g30355 Nelumbo nucifera HOM05D004652 ORTHO05D005634 2.3e-140 502.7 344 69.2
PGSC0003DMG400004028 Solanum tuberosum HOM05D004652 ORTHO05D005634 3.9e-140 501.9 347 68.6
Peaxi162Scf00549g00023 Petunia axillaris HOM05D004652 ORTHO05D005634 6.7e-140 501.1 345 68.4
Actinidia36476 Actinidia chinensis HOM05D004652 ORTHO05D005634 1.3e-138 496.9 345 67.2
RcHm_v2.0_Chr2g0106191 Rosa chinensis HOM05D004652 ORTHO05D005634 3.7e-138 495.4 346 68.2
FvH4_1g16330 Fragaria vesca HOM05D004652 ORTHO05D005634 4.0e-137 491.9 346 67.9
FAN19G0057 Fragaria x ananassa HOM05D004652 ORTHO05D005634 6.9e-137 491.1 346 67.9
CSS0025726 Camellia sinensis var. sinensis HOM05D004652 ORTHO05D005634 1.2e-136 490.3 346 66.8
CiPaw.01G015500 Carya illinoinensis HOM05D004652 ORTHO05D005634 1.5e-136 490.0 346 66.8
QL06p040720 Quercus lobata HOM05D004652 ORTHO05D005634 1.5e-136 490.0 345 67.0
Glyma.11G054000 Glycine max HOM05D004652 ORTHO05D005634 2.0e-136 489.6 349 68.2
Nitab4.5_0002765g0060 Nicotiana tabacum HOM05D004652 ORTHO05D005634 4.5e-136 488.4 350 66.3
CiPaw.01G015800 Carya illinoinensis HOM05D004652 ORTHO05D005634 2.2e-135 486.1 346 66.8
FAN23G0595 Fragaria x ananassa HOM05D004652 ORTHO05D005634 3.8e-135 485.3 346 66.8
arahy.Tifrunner.gnm1.ann1.8Y90C0 Arachis hypogaea HOM05D004652 ORTHO05D005634 1.1e-134 483.8 355 67.0
CANSAT25G2702 Cannabis sativa HOM05D004652 ORTHO05D005634 1.1e-134 483.8 346 67.1
arahy.Tifrunner.gnm1.ann1.EFTP1R Arachis hypogaea HOM05D004652 ORTHO05D005634 9.3e-134 480.7 355 67.0
Lj2g0023089 Lotus japonicus HOM05D004652 ORTHO05D005634 9.3e-134 480.7 350 67.1
MELO3C020851.2 Cucumis melo HOM05D004652 ORTHO05D005634 4.6e-133 478.4 346 65.6
FAN28G0632 Fragaria x ananassa HOM05D004652 ORTHO05D005634 4.6e-133 478.4 350 66.3
Glyma.01G188100 Glycine max HOM05D004652 ORTHO05D005634 4.6e-133 478.4 349 66.2
HanXRQChr15g0490761 Helianthus annuus HOM05D004652 ORTHO05D005634 1.8e-132 476.5 349 65.0
CsaV3_2G016420 Cucumis sativus L. HOM05D004652 ORTHO05D005634 3.0e-132 475.7 346 65.9
GSVIVG01022087001 Vitis vinifera HOM05D004652 ORTHO05D005634 3.0e-132 475.7 347 64.6
MD02G1175800 Malus domestica HOM05D004652 ORTHO05D005634 3.9e-132 475.3 348 67.0
Actinidia12037 Actinidia chinensis HOM05D004652 ORTHO05D005634 5.1e-132 474.9 374 61.8
Haze_15373 Corylus avellana HOM05D004652 ORTHO05D005634 5.1e-132 474.9 376 62.0
Phvul.002G017100 Phaseolus vulgaris HOM05D004652 ORTHO05D005634 5.1e-132 474.9 349 66.2
VMungo1215G2858 Vigna mungo HOM05D004652 ORTHO05D005634 3.3e-131 472.2 350 65.4
Lj7A73G20 Lonicera japonica HOM05D004652 ORTHO05D005634 7.4e-131 471.1 307 71.3
Hma1.2p1_0670F.1_g200440 Hydrangea macrophylla HOM05D004652 ORTHO05D005634 1.6e-130 469.9 350 65.7
CSS0033708 Camellia sinensis var. sinensis HOM05D004652 ORTHO05D005634 4.8e-130 468.4 331 67.1
Potri.007G045900 Populus trichocarpa HOM05D004652 ORTHO05D005634 1.1e-129 467.2 346 64.2
Lalb_Chr05g0213341 Lupinus albus HOM05D004652 ORTHO05D005634 1.4e-129 466.8 346 63.9
Psat3g034240 Pisum sativum HOM05D004652 ORTHO05D005634 2.4e-129 466.1 347 66.0
Medtr7g104350 Medicago truncatula HOM05D004652 ORTHO05D005634 4.1e-129 465.3 346 65.6
Lsat_1_v5_gn_4_165120 Lactuca sativa HOM05D004652 ORTHO05D005634 6.9e-129 464.5 346 65.6
TPR.G19549 Trifolium pratense HOM05D004652 ORTHO05D005634 6.5e-127 458.0 344 63.7
Duzib147G0331 Durio zibethinus HOM05D004652 ORTHO05D005634 1.1e-126 457.2 337 64.4
Ciclev10025986m.g Citrus clementina HOM05D004652 ORTHO05D005634 1.4e-126 456.8 350 62.6
DCAR_010876 Daucus carota HOM05D004652 ORTHO05D005634 1.4e-126 456.8 354 62.7
Thecc.01G060000 Theobroma cacao HOM05D004652 ORTHO05D005634 1.4e-126 456.8 306 68.6
PSO675G7477 Papaver somniferum HOM05D004652 ORTHO05D005634 1.9e-126 456.4 319 66.8
PGR102G1991 Punica granatum HOM05D004652 ORTHO05D005634 4.2e-126 455.3 347 62.5
ECA232G0198 Erigeron canadensis HOM05D004652 ORTHO05D005634 6.1e-125 451.4 323 65.9
Manes.13G121100 Manihot esculenta HOM05D004652 ORTHO05D005634 7.9e-125 451.1 352 62.2
Sed0013827 Sechium edule HOM05D004652 ORTHO05D005634 1.0e-124 450.7 348 63.2
GSVIVG01031712001 Vitis vinifera HOM05D004652 ORTHO05D005634 1.8e-124 449.9 345 64.9
Oeu049898.1 Olea europaea HOM05D004652 ORTHO05D005634 3.0e-124 449.1 298 70.8
Atru.chr5.2643 Acer truncatum HOM05D004652 ORTHO05D005634 3.9e-124 448.7 328 64.9
Atru.chr5.2649 Acer truncatum HOM05D004652 ORTHO05D005634 3.9e-124 448.7 328 64.9
SGA_v2.0_scaffold143G35809 Striga asiatica HOM05D004652 ORTHO05D005634 5.1e-124 448.4 280 75.4
Ciclev10030127m.g Citrus clementina HOM05D004652 ORTHO05D005634 5.7e-123 444.9 346 62.1
Cpa.g.sc55.119 Carica papaya HOM05D004652 ORTHO05D005634 7.4e-123 444.5 343 62.1
Potri.009G099600 Populus trichocarpa HOM05D004652 ORTHO05D005634 7.4e-123 444.5 346 63.6
TWI31G1310 Tripterygium wilfordii HOM05D004652 ORTHO05D005634 2.2e-122 443.0 307 67.1
Aqoxy6G01262 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 3.7e-122 442.2 324 64.5
Sabra07G0041100 Salix brachista HOM05D004652 ORTHO05D005634 1.1e-121 440.7 380 57.1
AUR62013234 Chenopodium quinoa HOM05D004652 ORTHO05D005634 1.4e-121 440.3 344 62.2
Duzib132G1249 Durio zibethinus HOM05D004652 ORTHO05D005634 2.4e-121 439.5 345 62.0
Sabra09G0075900 Salix brachista HOM05D004652 ORTHO05D005634 4.1e-121 438.7 346 62.7
Gorai.013G045700 Gossypium raimondii HOM05D004652 ORTHO05D005634 5.3e-121 438.3 340 63.8
TWI09G0879 Tripterygium wilfordii HOM05D004652 ORTHO05D005634 1.2e-120 437.2 346 60.4
Eucgr.I01131 Eucalyptus grandis HOM05D004652 ORTHO05D005634 2.6e-120 436.0 346 63.3
Thecc.02G103600 Theobroma cacao HOM05D004652 ORTHO05D005634 2.6e-120 436.0 336 64.0
vmacro05311 Vaccinium macrocarpon HOM05D004652 ORTHO05D005634 2.6e-120 436.0 346 61.3
Gohir.A13G042200 Gossypium hirsutum HOM05D004652 ORTHO05D005634 3.4e-120 435.6 340 63.8
Gorai.007G215700 Gossypium raimondii HOM05D004652 ORTHO05D005634 2.9e-119 432.6 343 61.5
Sc07g0000730 Simmondsia chinensis HOM05D004652 ORTHO05D005634 4.2e-118 428.7 343 59.5
SGA_v2.0_scaffold34G13618 Striga asiatica HOM05D004652 ORTHO05D005634 5.5e-118 428.3 281 73.3
Os03g0109700 Oryza sativa ssp. japonica HOM05D004652 ORTHO05D005634 1.8e-116 423.3 308 64.9
Gohir.A11G195100 Gossypium hirsutum HOM05D004652 ORTHO05D005634 3.0e-116 422.5 304 65.8
THA.LOC104807263 Tarenaya hassleriana HOM05D004652 ORTHO05D005634 5.7e-115 418.3 321 62.0
EL10Ac9g22324 Beta vulgaris HOM05D004652 ORTHO05D005634 3.7e-114 415.6 354 57.1
HPP92_024094 Vanilla planifolia HOM05D004652 ORTHO05D005634 1.4e-113 413.7 349 59.0
Rhsim10G0114700 Rhododendron simsii HOM05D004652 ORTHO05D005634 6.9e-113 411.4 309 63.1
Atru.chr3.293 Acer truncatum HOM05D004652 ORTHO05D005634 1.2e-112 410.6 352 56.5
ATR0724G029 Amborella trichopoda HOM05D004652 ORTHO05D005634 2.0e-112 409.8 341 59.8
AL7G17310 Arabidopsis lyrata HOM05D004652 ORTHO05D005634 7.7e-112 407.9 315 61.6
CDE02G2369 Ceratophyllum demersum HOM05D004652 ORTHO05D005634 7.7e-112 407.9 339 59.6
AUR62010252 Chenopodium quinoa HOM05D004652 ORTHO05D005634 7.7e-112 407.9 280 68.6
THA.LOC104807591 Tarenaya hassleriana HOM05D004652 ORTHO05D005634 7.7e-112 407.9 342 58.8
Eucgr.H01690 Eucalyptus grandis HOM05D004652 ORTHO05D005634 1.3e-111 407.1 312 61.2
AT2G23370 Arabidopsis thaliana HOM05D004652 ORTHO05D005634 3.8e-111 405.6 341 58.7
Ah.01g017900 Amaranthus hybridus HOM05D004652 ORTHO05D005634 5.0e-111 405.2 287 65.2
Aa31LG2G16510 Aethionema arabicum HOM05D002471 ORTHO05D003712 8.5e-111 404.4 307 62.9
Hund13540 Selenicereus undatus HOM05D004652 ORTHO05D005634 8.5e-111 404.4 342 57.6
AT4G34090 Arabidopsis thaliana HOM05D004652 ORTHO05D005634 1.9e-110 403.3 315 61.0
PSO541G5706 Papaver somniferum HOM05D004652 ORTHO05D005634 1.9e-110 403.3 319 61.8
CARHR242200 Cardamine hirsuta HOM05D004652 ORTHO05D005634 3.2e-110 402.5 341 58.4
Sp7g31800 Schrenkiella parvula HOM05D004652 ORTHO05D005634 9.4e-110 401.0 317 60.9
BcaNung03359 Brassica carinata HOM05D004652 ORTHO05D005634 1.2e-109 400.6 314 60.5
Thhalv10025679m.g Eutrema salsugineum HOM05D004652 ORTHO05D005634 1.6e-109 400.2 317 59.9
CARHR293000 Cardamine hirsuta HOM05D004652 ORTHO05D005634 4.7e-109 398.7 323 60.4
Prupe.6G231900 Prunus persica HOM05D004652 ORTHO05D005634 6.1e-109 398.3 286 65.4
Carub.0007s0633 Capsella rubella HOM05D004652 ORTHO05D005634 1.0e-108 397.5 315 60.3
Gohir.D11G201200 Gossypium hirsutum HOM05D004652 ORTHO05D005634 2.0e-107 393.3 289 65.1
Zm00001eb404220 Zea mays HOM05D004652 ORTHO05D005634 4.4e-107 392.1 325 59.7
Sp4g02380 Schrenkiella parvula HOM05D004652 ORTHO05D005634 1.3e-106 390.6 325 59.4
AL4G13280 Arabidopsis lyrata HOM05D004652 ORTHO05D005634 2.2e-106 389.8 324 59.6
Carub.0004s0257 Capsella rubella HOM05D004652 ORTHO05D005634 8.2e-106 387.9 327 58.4
BolC8t51563H Brassica oleracea HOM05D004652 ORTHO05D005634 1.1e-105 387.5 313 59.1
A09p56940 Brassica napus HOM05D004652 ORTHO05D005634 1.2e-104 384.0 313 58.8
BcaC07g40988 Brassica carinata HOM05D004652 ORTHO05D005634 1.6e-104 383.6 313 58.8
C08p39900 Brassica napus HOM05D004652 ORTHO05D005634 1.6e-104 383.6 313 58.8
AUR62001905 Chenopodium quinoa HOM05D004652 ORTHO05D005634 1.0e-103 380.9 314 57.0
BraA09t41086Z Brassica rapa HOM05D004652 ORTHO05D005634 3.8e-103 379.0 313 58.1
Hund00119 Selenicereus undatus HOM05D004652 ORTHO05D005634 3.2e-102 375.9 341 56.9
Aa31LG7G13600 Aethionema arabicum HOM05D004652 ORTHO05D005634 4.1e-97 359.0 384 51.8
SMO367G0761 Selaginella moellendorffii HOM05D004652 ORTHO05D005634 3.5e-96 355.9 304 55.9
AUR62003906 Chenopodium quinoa HOM05D004652 ORTHO05D005634 1.7e-95 353.6 283 58.0
BolC7t46455H Brassica oleracea HOM05D004652 ORTHO05D005634 1.1e-94 350.9 317 56.2
Mapoly0032s0004 Marchantia polymorpha HOM05D004652 ORTHO05D005634 2.1e-93 346.7 310 53.5
BraA03t15329Z Brassica rapa HOM05D004652 ORTHO05D005634 8.0e-93 344.7 309 55.7
ClCG02G012270 Citrullus lanatus HOM05D004652 ORTHO05D005634 6.8e-92 341.7 261 62.1
Pp3c4_13980 Physcomitrium patens HOM05D004652 ORTHO05D005634 8.8e-92 341.3 303 54.5
COL.COLO4_24563 Corchorus olitorius HOM05D004652 ORTHO05D005634 1.5e-91 340.5 252 64.3
C07p60150 Brassica napus HOM05D004652 ORTHO05D005634 2.2e-90 336.7 344 51.7
Ca_08994_v3 Cicer arietinum L. HOM05D004652 ORTHO05D005634 2.8e-90 336.3 346 52.0
Thhalv10000243m.g Eutrema salsugineum HOM05D004652 ORTHO05D005634 8.3e-90 334.7 328 53.7
Cpa.g.sc200.27 Carica papaya HOM05D004652 ORTHO05D005634 1.1e-89 334.3 362 50.8
A03p62590 Brassica napus HOM05D004652 ORTHO05D005634 1.2e-88 330.9 344 50.9
Pp3c13_18360 Physcomitrium patens HOM05D004652 ORTHO05D005634 3.6e-85 319.3 303 51.5
COL.COLO4_32629 Corchorus olitorius HOM05D004652 ORTHO05D005634 4.9e-82 308.9 340 48.8
AagrBONN_evm.TU.Sc2ySwM_362.2895 Anthoceros agrestis HOM05D004652 ORTHO05D005634 5.9e-80 302.0 316 48.4
CBR_g34458 Chara braunii HOM05D004652 ORTHO05D005634 7.8e-80 301.6 336 46.4
EL10Ac6g15724 Beta vulgaris HOM05D004652 ORTHO05D005634 1.5e-78 297.4 236 59.3
Oeu004436.1 Olea europaea HOM05D004652 ORTHO05D005634 1.5e-78 297.4 319 52.7
Ah.02g125990 Amaranthus hybridus HOM05D004652 ORTHO05D005634 3.2e-73 279.6 284 49.3
FAN26G0096 Fragaria x ananassa HOM05D004652 ORTHO05D005634 3.9e-71 272.7 165 78.8
Eucgr.I01132 Eucalyptus grandis HOM05D004652 ORTHO05D005634 8.9e-68 261.5 230 55.7
Gohir.D13G040700 Gossypium hirsutum HOM05D004652 ORTHO05D005634 9.8e-67 258.1 228 55.7
TAR381G1258 Trochodendron aralioides HOM05D004652 ORTHO05D005634 4.4e-59 232.6 203 57.1
SEGI_25477 Sequoiadendron giganteum HOM05D004652 ORTHO05D005634 1.3e-55 221.1 174 60.3
SEGI_26044 Sequoiadendron giganteum HOM05D004652 ORTHO05D005634 1.3e-55 221.1 174 60.3
Aqoxy2G01254 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 2.3e-55 220.3 141 73.8
TAR381G1342 Trochodendron aralioides HOM05D004652 ORTHO05D005634 6.9e-44 182.2 113 76.1
Cre13.g563150 Chlamydomonas reinhardtii HOM05D004652 ORTHO05D005634 1.2e-40 171.4 327 31.8
ECA248G0229 Erigeron canadensis HOM05D004652 ORTHO05D005634 1.2e-40 171.4 117 66.7
Aqoxy4G02413 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 6.0e-40 169.1 112 71.4
PRCOL_00001748 Prasinoderma coloniale HOM05D004652 ORTHO05D005634 2.1e-37 160.6 308 34.1
MCO15G669 Micromonas commoda HOM05D004652 ORTHO05D005634 7.6e-35 152.1 340 29.1
TAR381G1519 Trochodendron aralioides HOM05D004652 ORTHO05D005634 3.3e-30 136.7 165 46.7
Potri.001G304401 Populus trichocarpa HOM05D004652 ORTHO05D005634 5.3e-28 129.4 126 52.4
MCO09G010 Micromonas commoda HOM05D004652 ORTHO05D005634 2.1e-24 117.5 369 30.4
Sabra07G0040900 Salix brachista HOM05D015619 ORTHO05D009044 4.3e-22 109.8 86 64.0
Lalb_Chr09g0323281 Lupinus albus HOM05D004652 ORTHO05D005634 2.4e-20 104.0 166 39.2
Cc00_g07740 Coffea canephora HOM05D004652 ORTHO05D005634 7.9e-16 89.0 287 25.4
CDE01G0594 Ceratophyllum demersum HOM05D000934 ORTHO05D000746 3.3e-14 83.6 106 43.4


User provided reference genes

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