Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_736.g22372 Utricularia gibba HOM05D006144 ORTHO05D006357 0.0e+00 1256.9 637 100.0
Migut.H00451 Erythranthe guttata HOM05D006144 ORTHO05D006357 2.3e-125 453.8 651 43.6
MSTRG.2895 Avicennia marina HOM05D006144 ORTHO05D006357 2.0e-118 430.6 685 41.9
SGA_v2.0_scaffold204G41590 Striga asiatica HOM05D006144 ORTHO05D006357 2.0e-113 414.1 641 41.5
Solyc03g044620.4 Solanum lycopersicum HOM05D006144 ORTHO05D006357 6.4e-112 409.1 661 40.5
Atru.chr3.396 Acer truncatum HOM05D006144 ORTHO05D006357 1.0e-109 401.7 702 39.5
Oeu049306.1 Olea europaea HOM05D006144 ORTHO05D006357 3.9e-109 399.8 639 40.4
CSS0009151 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 1.1e-106 391.7 697 38.3
Lj4C140T7 Lonicera japonica HOM05D006144 ORTHO05D006357 1.1e-106 391.7 644 39.4
CSS0011451 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 2.3e-106 390.6 697 38.2
Cc07_g05860 Coffea canephora HOM05D006144 ORTHO05D006357 5.8e-105 386.0 691 37.9
Oeu004869.1 Olea europaea HOM05D006144 ORTHO05D006357 1.4e-103 381.3 688 39.0
Haze_15426 Corylus avellana HOM05D006144 ORTHO05D006357 1.9e-103 380.9 660 39.4
Sopen03g008900 Solanum pennellii HOM05D006144 ORTHO05D006357 3.2e-103 380.2 661 39.3
Nitab4.5_0001684g0030 Nicotiana tabacum HOM05D006144 ORTHO05D006357 1.2e-102 378.3 693 38.5
Oeu003786.1 Olea europaea HOM05D006144 ORTHO05D006357 1.6e-102 377.9 679 38.0
GSVIVG01002633001 Vitis vinifera HOM05D006144 ORTHO05D006357 2.7e-102 377.1 681 39.1
Nitab4.5_0000382g0030 Nicotiana tabacum HOM05D006144 ORTHO05D006357 4.6e-102 376.3 695 38.4
CiPaw.01G021400 Carya illinoinensis HOM05D006144 ORTHO05D006357 1.3e-101 374.8 697 36.4
TAR381G1042 Trochodendron aralioides HOM05D006144 ORTHO05D006357 2.3e-101 374.0 678 38.9
CAN.G11.1 Capsicum annuum HOM05D006144 ORTHO05D006357 3.9e-101 373.2 686 37.0
COL.COLO4_22183 Corchorus olitorius HOM05D006144 ORTHO05D006357 5.1e-101 372.9 683 38.4
Prupe.7G136200 Prunus persica HOM05D006144 ORTHO05D006357 1.1e-100 371.7 680 37.4
Duzib147G1467 Durio zibethinus HOM05D006144 ORTHO05D006357 1.9e-100 370.9 688 37.1
Cfa003998 Carpinus fangiana HOM05D006144 ORTHO05D006357 4.3e-100 369.8 653 37.7
MD02G1169100 Malus domestica HOM05D006144 ORTHO05D006357 1.2e-99 368.2 694 36.5
Potri.007G041300 Populus trichocarpa HOM05D006144 ORTHO05D006357 2.8e-99 367.1 708 38.3
QL06p042250 Quercus lobata HOM05D006144 ORTHO05D006357 2.8e-99 367.1 693 37.7
Nn5g30196 Nelumbo nucifera HOM05D006144 ORTHO05D006357 3.6e-99 366.7 691 38.1
Actinidia36503 Actinidia chinensis HOM05D006144 ORTHO05D006357 8.1e-99 365.5 645 36.7
Ciclev10024721m.g Citrus clementina HOM05D006144 ORTHO05D006357 8.1e-99 365.5 684 37.1
MELO3C007550.2 Cucumis melo HOM05D006144 ORTHO05D006357 1.1e-98 365.2 659 39.9
PGSC0003DMG400019754 Solanum tuberosum HOM05D006144 ORTHO05D006357 1.1e-98 365.2 684 36.1
FAN28G0789 Fragaria x ananassa HOM05D006144 ORTHO05D006357 1.4e-98 364.8 685 38.1
vmacro05326 Vaccinium macrocarpon HOM05D006144 ORTHO05D006357 2.3e-98 364.0 666 36.9
ClCG01G016710 Citrullus lanatus HOM05D006144 ORTHO05D006357 5.2e-98 362.8 669 38.3
CsaV3_6G043130 Cucumis sativus L. HOM05D006144 ORTHO05D006357 2.6e-97 360.5 669 39.8
MD15G1281500 Malus domestica HOM05D006144 ORTHO05D006357 3.4e-97 360.1 689 35.4
FAN26G0177 Fragaria x ananassa HOM05D006144 ORTHO05D006357 9.9e-97 358.6 685 37.7
Potri.005G136600 Populus trichocarpa HOM05D006144 ORTHO05D006357 4.9e-96 356.3 648 37.3
Peaxi162Scf00183g00711 Petunia axillaris HOM05D006144 ORTHO05D006357 6.4e-96 355.9 687 36.2
TWI09G0039 Tripterygium wilfordii HOM05D006144 ORTHO05D006357 8.4e-96 355.5 681 36.6
Rhsim10G0119800 Rhododendron simsii HOM05D006144 ORTHO05D006357 4.1e-95 353.2 672 37.5
CANSAT01G0270 Cannabis sativa HOM05D006144 ORTHO05D006357 2.7e-94 350.5 689 36.4
CSS0044544 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 4.6e-94 349.7 679 35.8
FAN23G0857 Fragaria x ananassa HOM05D006144 ORTHO05D006357 4.6e-94 349.7 685 37.1
FvH4_1g15710 Fragaria vesca HOM05D006144 ORTHO05D006357 1.3e-93 348.2 691 37.2
Gohir.A11G046100 Gossypium hirsutum HOM05D006144 ORTHO05D006357 2.3e-93 347.4 682 38.3
FAN19G3143 Fragaria x ananassa HOM05D006144 ORTHO05D006357 5.1e-93 346.3 689 36.4
Eucgr.H01999 Eucalyptus grandis HOM05D006144 ORTHO05D006357 6.6e-93 345.9 676 37.9
Psat0s3889g0080 Pisum sativum HOM05D006144 ORTHO05D006357 8.6e-93 345.5 646 37.3
Thecc.01G052700 Theobroma cacao HOM05D006144 ORTHO05D006357 8.6e-93 345.5 680 35.7
RcHm_v2.0_Chr2g0105021 Rosa chinensis HOM05D006144 ORTHO05D006357 1.9e-92 344.4 684 36.7
Actinidia12060 Actinidia chinensis HOM05D006144 ORTHO05D006357 2.5e-92 344.0 683 35.3
Sed0018548 Sechium edule HOM05D006144 ORTHO05D006357 1.6e-91 341.3 677 38.4
DCAR_025720 Daucus carota HOM05D006144 ORTHO05D006357 8.1e-91 339.0 700 35.0
Cpa.g.sc55.182 Carica papaya HOM05D006144 ORTHO05D006357 1.4e-90 338.2 647 36.2
Glyma.01G184700 Glycine max HOM05D006144 ORTHO05D006357 6.8e-90 335.9 673 36.4
Hund13563 Selenicereus undatus HOM05D006144 ORTHO05D006357 1.2e-89 335.1 653 37.8
Gohir.D11G049700 Gossypium hirsutum HOM05D006144 ORTHO05D006357 2.0e-89 334.3 698 36.4
Gorai.007G053500 Gossypium raimondii HOM05D006144 ORTHO05D006357 2.0e-89 334.3 694 35.9
Sabra07G0036900 Salix brachista HOM05D006144 ORTHO05D006357 4.4e-89 333.2 582 38.1
MSTRG.23764 Avicennia marina HOM05D006144 ORTHO05D006357 7.6e-89 332.4 675 38.8
Manes.12G100500 Manihot esculenta HOM05D006144 ORTHO05D006357 9.9e-89 332.0 668 37.1
arahy.Tifrunner.gnm1.ann1.AH11HU Arachis hypogaea HOM05D006144 ORTHO05D006357 1.3e-88 331.6 670 35.5
TPR.G31101 Trifolium pratense HOM05D006144 ORTHO05D006357 1.7e-88 331.3 647 37.4
Aqoxy6G01406 Aquilegia oxysepala HOM05D006144 ORTHO05D006357 1.4e-87 328.2 675 35.6
Phvul.002G020300 Phaseolus vulgaris HOM05D006144 ORTHO05D006357 1.4e-87 328.2 678 37.5
VMungo1215G0092 Vigna mungo HOM05D006144 ORTHO05D006357 2.4e-87 327.4 675 37.3
HPP92_004081 Vanilla planifolia HOM05D006144 ORTHO05D006357 7.1e-87 325.9 671 34.7
Lj2g0024358 Lotus japonicus HOM05D006144 ORTHO05D006357 4.6e-86 323.2 653 36.9
Hma1.2p1_0200F.1_g086100 Hydrangea macrophylla HOM05D006144 ORTHO05D006357 6.0e-86 322.8 652 34.5
arahy.Tifrunner.gnm1.ann1.IY5EPV Arachis hypogaea HOM05D006144 ORTHO05D006357 8.7e-85 318.9 671 35.2
Glyma.11G057500 Glycine max HOM05D006144 ORTHO05D006357 8.7e-85 318.9 674 36.5
Ca_24781_v3 Cicer arietinum L. HOM05D006144 ORTHO05D006357 1.9e-84 317.8 652 36.7
PGR102G0121 Punica granatum HOM05D006144 ORTHO05D006357 4.8e-83 313.2 664 35.1
PSO675G0817 Papaver somniferum HOM05D006144 ORTHO05D006357 6.2e-83 312.8 684 35.7
Dinv39873 Davidia involucrata HOM05D006144 ORTHO05D006357 2.6e-81 307.4 673 33.4
EL10Ac6g15152 Beta vulgaris HOM05D006144 ORTHO05D006357 1.7e-80 304.7 637 33.8
Ah.03g144510 Amaranthus hybridus HOM05D006144 ORTHO05D006357 3.8e-80 303.5 620 37.3
Lalb_Chr16g0388301 Lupinus albus HOM05D006144 ORTHO05D006357 1.9e-79 301.2 674 34.9
THA.LOC104804508 Tarenaya hassleriana HOM05D006144 ORTHO05D006357 9.3e-79 298.9 623 35.2
THA.LOC104826201 Tarenaya hassleriana HOM05D006144 ORTHO05D006357 9.3e-79 298.9 623 35.2
ATR0104G015 Amborella trichopoda HOM05D006144 ORTHO05D006357 4.6e-78 296.6 667 32.8
Lalb_Chr09g0333701 Lupinus albus HOM05D006144 ORTHO05D006357 3.9e-77 293.5 631 36.6
Sc03g0001430 Simmondsia chinensis HOM05D006144 ORTHO05D006357 5.6e-76 289.7 645 33.3
Nn1g05861 Nelumbo nucifera HOM05D006144 ORTHO05D006357 7.4e-76 289.3 328 48.2
Ca_22186_v3 Cicer arietinum L. HOM05D006144 ORTHO05D006357 1.6e-75 288.1 659 35.1
AUR62003855 Chenopodium quinoa HOM05D006144 ORTHO05D006357 1.4e-74 285.0 625 35.5
AUR62001952 Chenopodium quinoa HOM05D006144 ORTHO05D006357 6.9e-74 282.7 576 36.1
Os03g0186500 Oryza sativa ssp. japonica HOM05D006144 ORTHO05D006357 2.2e-72 277.7 657 32.6
TPR.G640 Trifolium pratense HOM05D006144 ORTHO05D006357 3.8e-72 276.9 308 48.4
Psat4g089200 Pisum sativum HOM05D006144 ORTHO05D006357 4.9e-72 276.6 664 34.2
PSO541G4136 Papaver somniferum HOM05D006144 ORTHO05D006357 3.5e-70 270.4 684 33.6
Zm00001eb006470 Zea mays HOM05D006144 ORTHO05D006357 3.5e-70 270.4 665 32.3
ECA232G0891 Erigeron canadensis HOM05D006144 ORTHO05D006357 3.9e-69 266.9 484 36.6
HanXRQChr14g0430551 Helianthus annuus HOM05D006144 ORTHO05D006357 1.1e-68 265.4 338 41.7
Lsat_1_v5_gn_4_167780 Lactuca sativa HOM05D006144 ORTHO05D006357 2.6e-65 254.2 626 31.3
CDE03G0440 Ceratophyllum demersum HOM05D006144 ORTHO05D006357 1.1e-63 248.8 647 30.6
MBI06_g08189_MAGBIO Magnolia biondii HOM05D006144 ORTHO05D006357 3.0e-61 240.7 668 30.5
Dinv29969 Davidia involucrata HOM05D006144 ORTHO05D006357 1.3e-53 215.3 511 31.9
Hma1.2p1_1415F.1_g282000 Hydrangea macrophylla HOM05D006144 ORTHO05D006357 3.3e-52 210.7 576 31.2
SEGI_17223 Sequoiadendron giganteum HOM05D006144 ORTHO05D006357 5.7e-52 209.9 330 37.3
Mapoly0063s0038 Marchantia polymorpha HOM05D006144 ORTHO05D006357 2.6e-41 174.5 306 34.0
Mapoly0063s0034 Marchantia polymorpha HOM05D006144 ORTHO05D006357 3.0e-37 161.0 335 29.3
AUR62039591 Chenopodium quinoa HOM05D006144 ORTHO05D006357 7.7e-33 146.4 278 34.2
AUR62013383 Chenopodium quinoa HOM05D006144 ORTHO05D006017 3.6e-30 137.5 277 34.7
HPP92_004109 Vanilla planifolia HOM05D006144 ORTHO05D006357 8.2e-27 126.3 145 42.1
SMO301G0037 Selaginella moellendorffii HOM05D006144 ORTHO05D006357 2.4e-26 124.8 477 24.7
Aa31LG1G15380 Aethionema arabicum HOM05D012861 ORTHO05D006357 3.6e-22 110.9 473 28.3
CBR_g31222 Chara braunii HOM05D006144 ORTHO05D006357 2.0e-12 78.6 297 23.9
AT5G66820 Arabidopsis thaliana HOM05D012861 ORTHO05D006357 4.9e-11 73.9 495 25.1
Dinv29968 Davidia involucrata HOM05D000370 ORTHO05D001366 5.4e-10 70.5 108 40.7
AagrBONN_evm.TU.Sc2ySwM_228.442 Anthoceros agrestis HOM05D006144 ORTHO05D006357 3.8e-08 64.3 142 31.0
Sp2g29830 Schrenkiella parvula HOM05D012861 ORTHO05D006357 1.9e-07 62.0 190 29.5
Sabra05G0109100 Salix brachista HOM05D006144 ORTHO05D006357 4.7e-06 57.4 76 44.7
BcaC06g34756 Brassica carinata HOM05D012861 ORTHO05D006357 6.1e-06 57.0 401 27.2
BolC7t43021H Brassica oleracea HOM05D012861 ORTHO05D006357 6.1e-06 57.0 403 27.5
A07p17060 Brassica napus HOM05D012861 ORTHO05D006357 8.0e-06 56.6 410 29.0
BraA07t29433Z Brassica rapa HOM05D012861 ORTHO05D006357 8.0e-06 56.6 410 29.0


User provided reference genes

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