Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_736.g22315 Utricularia gibba HOM05D007136 ORTHO05D008986 1.3e-213 746.1 368 100.0
Migut.F01500 Erythranthe guttata HOM05D007136 ORTHO05D008986 1.5e-89 334.0 323 57.0
Hma1.2p1_0683F.1_g202870 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 1.3e-85 320.9 325 55.4
SalBow6G2062 Salvia bowleyana HOM05D007136 ORTHO05D008986 1.2e-83 314.3 323 54.2
MSTRG.8246 Avicennia marina HOM05D007136 ORTHO05D008986 1.0e-82 311.2 323 54.5
vmacro10240 Vaccinium macrocarpon HOM05D007136 ORTHO05D008986 2.3e-82 310.1 330 53.0
Dinv26003 Davidia involucrata HOM05D007136 ORTHO05D008986 4.0e-82 309.3 326 54.3
SGA_v2.0_scaffold86G26943 Striga asiatica HOM05D007136 ORTHO05D008986 2.0e-81 307.0 319 53.0
GSVIVG01016535001 Vitis vinifera HOM05D007136 ORTHO05D008986 1.3e-80 304.3 326 52.1
Rhsim09G0165500 Rhododendron simsii HOM05D007136 ORTHO05D008986 1.7e-80 303.9 326 53.1
CANSAT56G3368 Cannabis sativa HOM05D007136 ORTHO05D008986 6.3e-80 302.0 325 51.4
Actinidia29223 Actinidia chinensis HOM05D007136 ORTHO05D008986 8.3e-80 301.6 322 52.5
Cc02_g07990 Coffea canephora HOM05D007136 ORTHO05D008986 1.8e-79 300.4 326 52.5
Thecc.10G044100 Theobroma cacao HOM05D007136 ORTHO05D008986 1.8e-79 300.4 325 50.5
TAR633G2090 Trochodendron aralioides HOM05D000330 ORTHO05D008986 7.0e-79 298.5 325 51.1
Prupe.2G233400 Prunus persica HOM05D007136 ORTHO05D008986 1.2e-78 297.7 325 50.2
Sopen06g013560 Solanum pennellii HOM05D007136 ORTHO05D008986 4.5e-78 295.8 322 51.2
Nn2g10391 Nelumbo nucifera HOM05D007136 ORTHO05D008986 5.9e-78 295.4 323 52.6
CiPaw.01G285300 Carya illinoinensis HOM05D007136 ORTHO05D008986 6.6e-77 292.0 327 49.8
MD07G1196400 Malus domestica HOM05D007136 ORTHO05D008986 1.1e-76 291.2 326 49.4
Lsat_1_v5_gn_2_119701 Lactuca sativa HOM05D007136 ORTHO05D008986 5.5e-76 288.9 322 49.1
ECA238G4577 Erigeron canadensis HOM05D007136 ORTHO05D008986 9.5e-76 288.1 321 48.9
RcHm_v2.0_Chr1g0366511 Rosa chinensis HOM05D007136 ORTHO05D008986 1.2e-75 287.7 326 48.8
Gorai.011G257200 Gossypium raimondii HOM05D007136 ORTHO05D008986 1.6e-75 287.3 325 48.6
TWI15G0021 Tripterygium wilfordii HOM05D007136 ORTHO05D008986 2.8e-75 286.6 328 48.8
AUR62038352 Chenopodium quinoa HOM05D007136 ORTHO05D008986 4.7e-75 285.8 323 49.2
Ca_07254_v3 Cicer arietinum L. HOM05D007136 ORTHO05D008986 6.1e-75 285.4 324 49.1
Gohir.D10G226000 Gossypium hirsutum HOM05D007136 ORTHO05D008986 8.0e-75 285.0 325 48.6
Nitab4.5_0000931g0010 Nicotiana tabacum HOM05D007136 ORTHO05D008986 1.0e-74 284.6 323 50.2
Gohir.A10G217300 Gossypium hirsutum HOM05D007136 ORTHO05D008986 1.4e-74 284.3 325 48.3
Haze_17049 Corylus avellana HOM05D007136 ORTHO05D008986 3.0e-74 283.1 336 48.8
Medtr7g024560 Medicago truncatula HOM05D007136 ORTHO05D008986 8.9e-74 281.6 324 48.5
Ciclev10032197m.g Citrus clementina HOM05D007136 ORTHO05D008986 2.6e-73 280.0 325 49.8
Atru.chr12.462 Acer truncatum HOM05D007136 ORTHO05D008986 3.4e-73 279.6 325 49.2
DCAR_027635 Daucus carota HOM05D007136 ORTHO05D008986 3.4e-73 279.6 321 49.5
Potri.010G205900 Populus trichocarpa HOM05D007136 ORTHO05D008986 7.5e-73 278.5 326 47.2
FvH4_7g22120 Fragaria vesca HOM05D007136 ORTHO05D008986 1.3e-72 277.7 326 46.9
Psat3g181320 Pisum sativum HOM05D007136 ORTHO05D008986 2.2e-72 276.9 323 48.0
PGR044G0021 Punica granatum HOM05D007136 ORTHO05D008986 2.2e-72 276.9 323 49.5
Atru.chr12.484 Acer truncatum HOM05D007136 ORTHO05D008986 2.8e-72 276.6 325 48.9
FAN01G1261 Fragaria x ananassa HOM05D007136 ORTHO05D008986 2.8e-72 276.6 326 46.6
Glyma.18G289500 Glycine max HOM05D007136 ORTHO05D008986 3.7e-72 276.2 322 46.9
FAN03G0232 Fragaria x ananassa HOM05D007136 ORTHO05D008986 4.9e-72 275.8 325 46.8
FAN06G2040 Fragaria x ananassa HOM05D007136 ORTHO05D008986 4.9e-72 275.8 326 46.6
Peaxi162Scf00658g00728 Petunia axillaris HOM05D007136 ORTHO05D008986 6.3e-72 275.4 321 50.5
HanXRQChr14g0458151 Helianthus annuus HOM05D007136 ORTHO05D008986 8.3e-72 275.0 323 47.4
Lj1g0011729 Lotus japonicus HOM05D007136 ORTHO05D008986 8.3e-72 275.0 321 48.6
Ah.16g107010 Amaranthus hybridus HOM05D007136 ORTHO05D008986 1.4e-71 274.2 324 47.8
arahy.Tifrunner.gnm1.ann1.IQ4HGL Arachis hypogaea HOM05D007136 ORTHO05D008986 1.4e-71 274.2 324 47.8
arahy.Tifrunner.gnm1.ann1.RSMT0C Arachis hypogaea HOM05D007136 ORTHO05D008986 1.4e-71 274.2 324 47.8
FAN01G1850 Fragaria x ananassa HOM05D007136 ORTHO05D008986 1.4e-71 274.2 326 46.6
EL10Ac2g03388 Beta vulgaris HOM05D007136 ORTHO05D008986 1.8e-71 273.9 357 44.5
Sed0006263 Sechium edule HOM05D007136 ORTHO05D008986 4.1e-71 272.7 325 46.8
FAN06G2061 Fragaria x ananassa HOM05D007136 ORTHO05D008986 3.5e-70 269.6 326 46.0
VMungo1383G1564 Vigna mungo HOM05D007136 ORTHO05D008986 3.5e-70 269.6 323 46.4
Aqoxy2G02097 Aquilegia oxysepala HOM05D007136 ORTHO05D008986 7.8e-70 268.5 327 44.3
Nitab4.5_0000065g0080 Nicotiana tabacum HOM05D007136 ORTHO05D008986 2.9e-69 266.5 323 49.8
Phvul.008G012700 Phaseolus vulgaris HOM05D007136 ORTHO05D008986 6.6e-69 265.4 323 45.8
Lalb_Chr10g0091721 Lupinus albus HOM05D007136 ORTHO05D008986 8.6e-69 265.0 320 46.2
ClCG09G019950 Citrullus lanatus HOM05D007136 ORTHO05D008986 7.3e-68 261.9 325 44.9
TPR.G15525 Trifolium pratense HOM05D007136 ORTHO05D008986 9.5e-68 261.5 323 45.5
Sabra10G0159100 Salix brachista HOM05D007136 ORTHO05D008986 2.8e-67 260.0 370 41.9
COL.COLO4_14997 Corchorus olitorius HOM05D007136 ORTHO05D008986 3.6e-67 259.6 369 42.3
MELO3C021650.2 Cucumis melo HOM05D007136 ORTHO05D008986 1.0e-66 258.1 323 45.5
CsaV3_5G026510 Cucumis sativus L. HOM05D007136 ORTHO05D008986 3.1e-66 256.5 323 44.9
Hund20032 Selenicereus undatus HOM05D007136 ORTHO05D008986 6.8e-66 255.4 320 45.3
THA.LOC104799346 Tarenaya hassleriana HOM05D007136 ORTHO05D008986 9.8e-65 251.5 315 44.8
QL08p059192 Quercus lobata HOM05D007136 ORTHO05D008986 4.9e-64 249.2 448 37.3
ATR0559G284 Amborella trichopoda HOM05D007136 ORTHO05D008986 1.9e-63 247.3 313 45.7
C05p63040 Brassica napus HOM05D007136 ORTHO05D008986 3.2e-63 246.5 325 43.4
BolC5t34957H Brassica oleracea HOM05D007136 ORTHO05D008986 3.2e-63 246.5 325 43.4
Cfa001492 Carpinus fangiana HOM05D007136 ORTHO05D008986 5.4e-63 245.7 290 48.3
PSO339G3352 Papaver somniferum HOM05D007136 ORTHO05D008986 7.0e-63 245.4 320 43.8
BraA05t23073Z Brassica rapa HOM05D007136 ORTHO05D008986 2.0e-62 243.8 325 43.4
Sp3g03000 Schrenkiella parvula HOM05D007136 ORTHO05D008986 6.0e-62 242.3 325 42.8
MBI05_g22899_MAGBIO Magnolia biondii HOM05D007136 ORTHO05D008986 7.8e-62 241.9 317 45.7
PSO151G0201 Papaver somniferum HOM05D007136 ORTHO05D008986 2.3e-61 240.4 319 43.3
Carub.0003s0327 Capsella rubella HOM05D007136 ORTHO05D008986 2.5e-60 236.9 325 41.5
Aa31LG5G14590 Aethionema arabicum HOM05D007136 ORTHO05D008986 3.3e-60 236.5 330 40.3
CARHR078150 Cardamine hirsuta HOM05D007136 ORTHO05D008986 6.2e-59 232.3 325 40.3
Thhalv10021212m.g Eutrema salsugineum HOM05D007136 ORTHO05D008986 1.4e-58 231.1 328 41.8
AL3G13930 Arabidopsis lyrata HOM05D007136 ORTHO05D008986 4.0e-58 229.6 325 41.5
A05p43340 Brassica napus HOM05D007136 ORTHO05D008986 2.0e-57 227.3 311 42.8
HPP92_001682 Vanilla planifolia HOM05D007136 ORTHO05D008986 2.6e-57 226.9 324 42.3
BcaC05g30543 Brassica carinata HOM05D007136 ORTHO05D008986 1.1e-55 221.5 307 42.0
Hma1.2p1_0683F.1_g202860 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 5.4e-55 219.2 222 56.3
Manes.07G114900 Manihot esculenta HOM05D007136 ORTHO05D008986 2.7e-54 216.9 256 47.7
CDE09G1315 Ceratophyllum demersum HOM05D007136 ORTHO05D008986 4.6e-54 216.1 330 38.5
CSS0005502 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 8.6e-53 211.8 246 50.0
Os03g0276600 Oryza sativa ssp. japonica HOM05D007136 ORTHO05D008986 8.6e-53 211.8 320 38.8
SEGI_31981 Sequoiadendron giganteum HOM05D007136 ORTHO05D008986 2.5e-52 210.3 312 39.4
CSS0027543 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 3.3e-52 209.9 246 49.2
Dinv31448 Davidia involucrata HOM05D007136 ORTHO05D008986 1.1e-50 204.9 250 48.4
Lj4C909G7 Lonicera japonica HOM05D007136 ORTHO05D008986 2.0e-49 200.7 221 51.1
Cpa.g.sc1.397 Carica papaya HOM05D007136 ORTHO05D008986 4.4e-49 199.5 223 50.2
Solyc06g043070.4 Solanum lycopersicum HOM05D007136 ORTHO05D008986 5.8e-49 199.1 223 50.7
Eucgr.J00020 Eucalyptus grandis HOM05D007136 ORTHO05D008986 1.3e-48 198.0 252 43.7
Sc09g0007080 Simmondsia chinensis HOM05D007136 ORTHO05D008986 6.4e-48 195.7 240 46.7
Zm00001eb012480 Zea mays HOM05D007136 ORTHO05D008986 1.6e-46 191.0 320 36.2
AT3G04020 Arabidopsis thaliana HOM05D007136 ORTHO05D008986 3.8e-40 169.9 212 44.8
Duzib106G1934 Durio zibethinus HOM05D007136 ORTHO05D008986 1.6e-35 154.5 194 49.0
Pp3c12_11030 Physcomitrium patens HOM05D007136 ORTHO05D008986 6.9e-34 149.1 338 29.6
Glyma.02G092900 Glycine max HOM05D007136 ORTHO05D008986 3.5e-30 136.7 212 38.7
AUR62041862 Chenopodium quinoa HOM05D007136 ORTHO05D008986 9.9e-25 118.6 132 50.8
CAN.G1401.1 Capsicum annuum HOM05D007136 ORTHO05D008986 1.6e-22 111.3 70 71.4
Solyc06g043060.1 Solanum lycopersicum HOM05D007136 ORTHO05D008986 1.0e-21 108.6 65 73.8
CSS0002221 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 1.3e-21 108.2 66 72.7
CSS0010171 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 5.1e-21 106.3 66 71.2
AUR62041861 Chenopodium quinoa HOM05D007136 ORTHO05D008986 1.5e-20 104.8 112 50.9
Mapoly0002s0030 Marchantia polymorpha HOM05D007136 ORTHO05D008986 4.8e-19 99.8 291 24.1
FAN10G3057 Fragaria x ananassa HOM05D007136 ORTHO05D025577 1.4e-18 98.2 84 53.6
SHI07863 Sapria himalayana HOM05D007136 ORTHO05D008986 2.4e-10 70.9 62 56.5


User provided reference genes

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